Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33187 Davidia involucrata HOM05D005434 ORTHO05D006412 2.2e-174 615.5 313 100.0
Dinv33176 Davidia involucrata HOM05D005434 ORTHO05D006412 4.0e-67 259.2 296 54.4
Dinv33188 Davidia involucrata HOM05D005434 ORTHO05D006412 2.6e-58 229.9 118 94.9
Dinv12078 Davidia involucrata HOM05D005434 ORTHO05D006412 6.6e-46 188.7 284 45.1
Actinidia20964 Actinidia chinensis HOM05D005434 ORTHO05D006412 6.7e-30 135.6 283 37.8
Haze_05156 Corylus avellana HOM05D005434 ORTHO05D006412 2.5e-29 133.7 287 38.7
Lj1A7T44 Lonicera japonica HOM05D005434 ORTHO05D006412 3.3e-29 133.3 140 54.3
Rhsim02G0256300 Rhododendron simsii HOM05D005434 ORTHO05D006412 8.2e-28 128.6 140 58.6
Atru.chr5.851 Acer truncatum HOM05D005434 ORTHO05D006412 3.4e-26 123.2 140 50.7
QL12p035062 Quercus lobata HOM05D005434 ORTHO05D006412 1.3e-25 121.3 301 35.5
GSVIVG01028240001 Vitis vinifera HOM05D005434 ORTHO05D006412 8.4e-25 118.6 283 36.0
Potri.002G186200 Populus trichocarpa HOM05D005434 ORTHO05D006412 1.4e-24 117.9 297 33.7
CSS0010810 Camellia sinensis var. sinensis HOM05D005434 ORTHO05D006412 2.5e-24 117.1 304 33.9
Potri.014G111500 Populus trichocarpa HOM05D005434 ORTHO05D006412 4.2e-24 116.3 304 35.2
Gohir.A07G131800 Gossypium hirsutum HOM05D005434 ORTHO05D006412 6.1e-23 112.5 143 49.0
Gohir.D07G136100 Gossypium hirsutum HOM05D005434 ORTHO05D006412 1.8e-22 110.9 158 47.5
Gorai.001G148200 Gossypium raimondii HOM05D005434 ORTHO05D006412 1.8e-22 110.9 158 47.5
Sabra14G0081900 Salix brachista HOM05D005434 ORTHO05D006412 6.7e-22 109.0 302 32.8
Ciclev10019510m.g Citrus clementina HOM05D005434 ORTHO05D006412 1.5e-21 107.8 286 32.2
RcHm_v2.0_Chr3g0485651 Rosa chinensis HOM05D005434 ORTHO05D006412 2.8e-20 103.6 242 33.9
Oeu052591.1 Olea europaea HOM05D005434 ORTHO05D006412 3.7e-20 103.2 140 45.7
DCAR_002941 Daucus carota HOM05D005434 ORTHO05D006412 6.3e-20 102.4 147 46.3
Manes.05G008100 Manihot esculenta HOM05D005434 ORTHO05D006412 2.4e-19 100.5 299 32.4
Prupe.3G001600 Prunus persica HOM05D005434 ORTHO05D006412 3.1e-19 100.1 153 44.4
DCAR_005712 Daucus carota HOM05D005434 ORTHO05D006412 9.0e-19 98.6 290 30.3
MD17G1286100 Malus domestica HOM05D005434 ORTHO05D006412 9.0e-19 98.6 153 41.8
CiPaw.07G126300 Carya illinoinensis HOM05D005434 ORTHO05D006412 2.0e-18 97.4 216 36.1
Thecc.01G326300 Theobroma cacao HOM05D005434 ORTHO05D006412 2.0e-18 97.4 302 30.8
COL.COLO4_23119 Corchorus olitorius HOM05D005434 ORTHO05D006412 3.4e-18 96.7 190 41.1
Duzib133G0025 Durio zibethinus HOM05D005434 ORTHO05D006412 3.4e-18 96.7 303 31.7
MD09G1291300 Malus domestica HOM05D005434 ORTHO05D006412 4.5e-18 96.3 180 36.7
CiPaw.08G081800 Carya illinoinensis HOM05D005434 ORTHO05D006412 5.9e-18 95.9 284 31.3
PGR142G2929 Punica granatum HOM05D005434 ORTHO05D006412 7.7e-18 95.5 174 39.1
TAR365G0925 Trochodendron aralioides HOM05D005434 ORTHO05D006412 7.7e-18 95.5 153 45.8
Actinidia25873 Actinidia chinensis HOM05D005434 ORTHO05D006412 2.9e-17 93.6 143 44.8
Duzib138G0614 Durio zibethinus HOM05D005434 ORTHO05D006412 6.5e-17 92.4 145 44.1
Glyma.02G007100 Glycine max HOM05D005434 ORTHO05D006412 8.5e-17 92.0 181 41.4
Glyma.10G138700 Glycine max HOM05D005434 ORTHO05D006412 1.4e-16 91.3 181 39.8
Cpa.g.sc57.27 Carica papaya HOM05D005434 ORTHO05D006412 5.5e-16 89.4 145 42.8
TWI14G0253 Tripterygium wilfordii HOM05D005434 ORTHO05D006412 7.2e-16 89.0 155 40.6
FAN23G2884 Fragaria x ananassa HOM05D005434 ORTHO05D006412 9.4e-16 88.6 140 40.0
Nitab4.5_0003092g0060 Nicotiana tabacum HOM05D005434 ORTHO05D006412 1.2e-15 88.2 179 39.1
TAR636G0087 Trochodendron aralioides HOM05D005434 ORTHO05D006412 1.2e-15 88.2 102 52.9
Ca_10237_v3 Cicer arietinum L. HOM05D005434 ORTHO05D006412 2.1e-15 87.4 297 31.6
Nitab4.5_0000222g0380 Nicotiana tabacum HOM05D005434 ORTHO05D006412 2.7e-15 87.0 179 39.1
FAN26G2209 Fragaria x ananassa HOM05D005434 ORTHO05D006412 3.6e-15 86.7 140 39.3
CAN.G179.30 Capsicum annuum HOM05D005434 ORTHO05D006412 6.1e-15 85.9 251 34.3
Psat6g158560 Pisum sativum HOM05D005434 ORTHO05D006412 7.9e-15 85.5 295 30.8
FAN28G1136 Fragaria x ananassa HOM05D005434 ORTHO05D006412 1.0e-14 85.1 140 38.6
arahy.Tifrunner.gnm1.ann1.9BA1LG Arachis hypogaea HOM05D005434 ORTHO05D006412 1.8e-14 84.3 277 29.6
arahy.Tifrunner.gnm1.ann1.G6BN46 Arachis hypogaea HOM05D005434 ORTHO05D006412 3.0e-14 83.6 277 29.6
Eucgr.K00557 Eucalyptus grandis HOM05D005434 ORTHO05D006412 3.0e-14 83.6 125 43.2
Gohir.A11G105400 Gossypium hirsutum HOM05D005434 ORTHO05D006412 3.0e-14 83.6 213 31.5
PGSC0003DMG400001122 Solanum tuberosum HOM05D005434 ORTHO05D006412 3.0e-14 83.6 146 42.5
TWI23G0760 Tripterygium wilfordii HOM05D005434 ORTHO05D006412 3.0e-14 83.6 155 40.6
Sopen01g030590 Solanum pennellii HOM05D005434 ORTHO05D006412 6.7e-14 82.4 169 40.8
AT2G46980 Arabidopsis thaliana HOM05D005434 ORTHO05D006412 1.5e-13 81.3 145 36.6
MBI19_g04828_MAGBIO Magnolia biondii HOM05D005434 ORTHO05D006412 1.5e-13 81.3 164 39.0
SHI34042 Sapria himalayana HOM05D005434 ORTHO05D006412 2.0e-13 80.9 139 39.6
Solyc01g079080.3 Solanum lycopersicum HOM05D005434 ORTHO05D006412 2.5e-13 80.5 169 40.2
AL4G46460 Arabidopsis lyrata HOM05D005434 ORTHO05D006412 3.3e-13 80.1 145 35.9
Cc01_g21750 Coffea canephora HOM05D005434 ORTHO05D006412 3.3e-13 80.1 158 39.9
Medtr1g085710 Medicago truncatula HOM05D005434 ORTHO05D006412 3.3e-13 80.1 304 30.9
ClCG02G017720 Citrullus lanatus HOM05D005434 ORTHO05D006412 4.3e-13 79.7 143 39.9
MBI18_g03842_MAGBIO Magnolia biondii HOM05D005434 ORTHO05D006412 4.3e-13 79.7 148 39.9
TPR.G3083 Trifolium pratense HOM05D005434 ORTHO05D006412 9.7e-13 78.6 297 31.3
Sed0005889 Sechium edule HOM05D005434 ORTHO05D006412 1.3e-12 78.2 140 37.9
Lalb_Chr02g0147191 Lupinus albus HOM05D005434 ORTHO05D006412 2.8e-12 77.0 191 35.6
CsaV3_6G012840 Cucumis sativus L. HOM05D005434 ORTHO05D006412 4.8e-12 76.3 143 36.4
FvH4_1g26160 Fragaria vesca HOM05D005434 ORTHO05D006412 4.8e-12 76.3 311 28.0
Actinidia21335 Actinidia chinensis HOM05D005434 ORTHO05D006412 6.3e-12 75.9 83 53.0
CARHR142350 Cardamine hirsuta HOM05D005434 ORTHO05D006412 8.2e-12 75.5 135 37.0
Sed0026347 Sechium edule HOM05D005434 ORTHO05D006412 1.1e-11 75.1 214 29.9
Aa31LG1G28350 Aethionema arabicum HOM05D005434 ORTHO05D006412 2.4e-11 73.9 148 36.5
Sp4g28980 Schrenkiella parvula HOM05D005434 ORTHO05D006412 2.4e-11 73.9 135 33.3
FAN19G2204 Fragaria x ananassa HOM05D005434 ORTHO05D006412 4.1e-11 73.2 311 27.7
BraA05t19085Z Brassica rapa HOM05D005434 ORTHO05D006412 2.6e-10 70.5 145 33.8
A05p00820 Brassica napus HOM05D005434 ORTHO05D006412 3.4e-10 70.1 145 33.8
BcaC02g12826 Brassica carinata HOM05D005434 ORTHO05D006412 4.5e-10 69.7 127 36.2
VMungo0720G1215 Vigna mungo HOM05D005434 ORTHO05D006412 4.5e-10 69.7 125 40.0
MELO3C013628.2 Cucumis melo HOM05D005434 ORTHO05D006412 1.0e-09 68.6 140 35.0
Aqoxy2G02439 Aquilegia oxysepala HOM05D005434 ORTHO05D006412 1.3e-09 68.2 141 40.4
EL10Ac4g10377 Beta vulgaris HOM05D005434 ORTHO05D006412 1.3e-09 68.2 137 38.0
Phvul.007G208600 Phaseolus vulgaris HOM05D005434 ORTHO05D006412 1.7e-09 67.8 142 38.0
BolC4t21751H Brassica oleracea HOM05D005434 ORTHO05D006412 2.2e-09 67.4 135 32.6
Migut.D00008 Erythranthe guttata HOM05D005434 ORTHO05D006412 2.2e-09 67.4 144 35.4
Nn3g21972 Nelumbo nucifera HOM05D005434 ORTHO05D006412 2.2e-09 67.4 235 28.5
Thhalv10001318m.g Eutrema salsugineum HOM05D005434 ORTHO05D006412 2.9e-09 67.0 119 39.5
ECA247G2130 Erigeron canadensis HOM05D005434 ORTHO05D008082 3.8e-09 66.6 140 34.3
BcaC02g12619 Brassica carinata HOM05D005434 ORTHO05D006412 5.0e-09 66.2 127 33.9
C04p00990 Brassica napus HOM05D005434 ORTHO05D006412 5.0e-09 66.2 101 38.6
Carub.0004s2971 Capsella rubella HOM05D005434 ORTHO05D006412 8.5e-09 65.5 136 33.1
AUR62011691 Chenopodium quinoa HOM05D005434 ORTHO05D006412 8.5e-09 65.5 221 29.0
SGA_v2.0_scaffold417G51248 Striga asiatica HOM05D005434 ORTHO05D006412 1.6e-07 61.2 142 34.5
AUR62024551 Chenopodium quinoa HOM05D005434 ORTHO05D006412 2.7e-07 60.5 208 28.4
Sc17g0000070 Simmondsia chinensis HOM05D005434 ORTHO05D006412 2.7e-07 60.5 122 34.4
CANSAT25G2989 Cannabis sativa HOM05D005434 ORTHO05D006412 4.7e-07 59.7 286 29.0
PSO210G4596 Papaver somniferum HOM05D005434 ORTHO05D006412 1.8e-06 57.8 160 32.5


User provided reference genes

Program Settings