Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33178 Davidia involucrata HOM05D005434 ORTHO05D006412 7.5e-53 210.3 110 100.0
Lj1A7G43 Lonicera japonica HOM05D005434 ORTHO05D006412 6.0e-42 174.1 109 82.6
Dinv12078 Davidia involucrata HOM05D005434 ORTHO05D006412 7.8e-42 173.7 106 86.8
GSVIVG01028239001 Vitis vinifera HOM05D005434 ORTHO05D006412 3.4e-37 158.3 109 76.1
TAR636G0087 Trochodendron aralioides HOM05D005434 ORTHO05D006412 4.4e-37 157.9 107 74.8
TAR365G0925 Trochodendron aralioides HOM05D005434 ORTHO05D006412 1.7e-36 156.0 107 76.6
QL12p035062 Quercus lobata HOM05D005434 ORTHO05D006412 1.1e-35 153.3 109 70.6
MD09G1291300 Malus domestica HOM05D005434 ORTHO05D006412 2.1e-34 149.1 109 70.6
RcHm_v2.0_Chr3g0485651 Rosa chinensis HOM05D005434 ORTHO05D006412 2.7e-34 148.7 109 73.4
Rhsim02G0256300 Rhododendron simsii HOM05D005434 ORTHO05D006412 3.5e-34 148.3 109 69.7
MD17G1286100 Malus domestica HOM05D005434 ORTHO05D006412 1.0e-33 146.7 107 69.2
MBI18_g03842_MAGBIO Magnolia biondii HOM05D005434 ORTHO05D006412 5.0e-33 144.4 107 72.0
FAN26G2209 Fragaria x ananassa HOM05D005434 ORTHO05D006412 6.6e-33 144.1 107 72.0
Potri.014G111500 Populus trichocarpa HOM05D005434 ORTHO05D006412 8.6e-33 143.7 107 66.4
Lalb_Chr02g0147201 Lupinus albus HOM05D005434 ORTHO05D006412 1.1e-32 143.3 107 68.2
CiPaw.07G126400 Carya illinoinensis HOM05D005434 ORTHO05D006412 3.3e-32 141.7 109 65.1
Glyma.02G007100 Glycine max HOM05D005434 ORTHO05D006412 4.3e-32 141.4 107 67.3
Actinidia20964 Actinidia chinensis HOM05D005434 ORTHO05D006412 7.3e-32 140.6 109 67.0
FAN23G2884 Fragaria x ananassa HOM05D005434 ORTHO05D006412 9.5e-32 140.2 107 70.1
Lsat_1_v5_gn_9_7120 Lactuca sativa HOM05D005434 ORTHO05D006412 1.6e-31 139.4 107 68.2
FvH4_1g26160 Fragaria vesca HOM05D005434 ORTHO05D006412 2.1e-31 139.0 107 70.1
FAN19G2204 Fragaria x ananassa HOM05D005434 ORTHO05D006412 2.1e-31 139.0 107 70.1
VMungo0720G1215 Vigna mungo HOM05D005434 ORTHO05D006412 2.1e-31 139.0 107 67.3
Ca_10237_v3 Cicer arietinum L. HOM05D005434 ORTHO05D006412 6.2e-31 137.5 107 66.4
Phvul.007G208600 Phaseolus vulgaris HOM05D005434 ORTHO05D006412 6.2e-31 137.5 107 65.4
PSO210G4596 Papaver somniferum HOM05D005434 ORTHO05D006412 8.1e-31 137.1 107 68.2
Glyma.10G138700 Glycine max HOM05D005434 ORTHO05D006412 1.1e-30 136.7 107 65.4
Medtr1g085710 Medicago truncatula HOM05D005434 ORTHO05D006412 1.1e-30 136.7 107 63.6
Psat6g158560 Pisum sativum HOM05D005434 ORTHO05D006412 1.8e-30 136.0 107 64.5
Potri.002G186200 Populus trichocarpa HOM05D005434 ORTHO05D006412 3.1e-30 135.2 109 61.5
CiPaw.08G081800 Carya illinoinensis HOM05D005434 ORTHO05D006412 5.2e-30 134.4 109 62.4
Lj5g0001301 Lotus japonicus HOM05D005434 ORTHO05D006412 5.2e-30 134.4 107 63.6
Nitab4.5_0000222g0380 Nicotiana tabacum HOM05D005434 ORTHO05D006412 6.8e-30 134.0 107 62.6
SHI34042 Sapria himalayana HOM05D005434 ORTHO05D006412 6.8e-30 134.0 109 60.6
Atru.chr5.851 Acer truncatum HOM05D005434 ORTHO05D006412 1.5e-29 132.9 109 63.3
ClCG02G017720 Citrullus lanatus HOM05D005434 ORTHO05D006412 1.5e-29 132.9 107 65.4
Cc01_g21750 Coffea canephora HOM05D005434 ORTHO05D006412 1.5e-29 132.9 106 67.9
TPR.G3083 Trifolium pratense HOM05D005434 ORTHO05D006412 1.5e-29 132.9 107 61.7
ECA247G2130 Erigeron canadensis HOM05D005434 ORTHO05D008082 5.8e-29 131.0 107 61.7
Sabra14G0081900 Salix brachista HOM05D005434 ORTHO05D006412 9.9e-29 130.2 117 59.0
Duzib138G0614 Durio zibethinus HOM05D005434 ORTHO05D006412 2.2e-28 129.0 109 61.5
DCAR_005712 Daucus carota HOM05D005434 ORTHO05D006412 2.9e-28 128.6 107 62.6
Thecc.01G326300 Theobroma cacao HOM05D005434 ORTHO05D006412 2.9e-28 128.6 109 60.6
PGR142G2929 Punica granatum HOM05D005434 ORTHO05D006412 3.7e-28 128.3 107 61.7
Sed0026347 Sechium edule HOM05D005434 ORTHO05D006412 4.9e-28 127.9 107 61.7
PGSC0003DMG400001122 Solanum tuberosum HOM05D005434 ORTHO05D006412 4.9e-28 127.9 107 58.9
EL10Ac4g10377 Beta vulgaris HOM05D005434 ORTHO05D006412 6.4e-28 127.5 106 62.3
COL.COLO4_23119 Corchorus olitorius HOM05D005434 ORTHO05D006412 1.1e-27 126.7 107 60.7
Manes.05G008100 Manihot esculenta HOM05D005434 ORTHO05D006412 1.4e-27 126.3 108 63.0
Peaxi162Scf00309g00625 Petunia axillaris HOM05D005434 ORTHO05D006412 1.4e-27 126.3 107 60.7
Haze_05156 Corylus avellana HOM05D005434 ORTHO05D006412 1.9e-27 125.9 91 65.9
Solyc01g079080.3 Solanum lycopersicum HOM05D005434 ORTHO05D006412 2.4e-27 125.6 107 57.9
Sc17g0000070 Simmondsia chinensis HOM05D005434 ORTHO05D006412 3.2e-27 125.2 106 64.2
DCAR_002941 Daucus carota HOM05D005434 ORTHO05D006412 5.4e-27 124.4 107 63.6
Sopen01g030590 Solanum pennellii HOM05D005434 ORTHO05D006412 5.4e-27 124.4 107 57.9
CAN.G179.30 Capsicum annuum HOM05D005434 ORTHO05D006412 9.2e-27 123.6 106 57.5
Prupe.3G001600 Prunus persica HOM05D005434 ORTHO05D006412 9.2e-27 123.6 88 70.5
Sed0005889 Sechium edule HOM05D005434 ORTHO05D006412 9.2e-27 123.6 106 60.4
Aqoxy2G02439 Aquilegia oxysepala HOM05D005434 ORTHO05D006412 1.2e-26 123.2 106 66.0
Ciclev10023478m.g Citrus clementina HOM05D005434 ORTHO05D006412 1.2e-26 123.2 84 71.4
AUR62011691 Chenopodium quinoa HOM05D005434 ORTHO05D006412 1.6e-26 122.9 103 62.1
Gohir.A11G105400 Gossypium hirsutum HOM05D005434 ORTHO05D006412 2.1e-26 122.5 109 58.7
Gohir.D11G110300 Gossypium hirsutum HOM05D005434 ORTHO05D006412 2.1e-26 122.5 109 58.7
TWI14G0253 Tripterygium wilfordii HOM05D005434 ORTHO05D006412 2.1e-26 122.5 109 58.7
CANSAT25G2989 Cannabis sativa HOM05D005434 ORTHO05D006412 1.3e-25 119.8 109 53.2
Gorai.001G148200 Gossypium raimondii HOM05D005434 ORTHO05D006412 1.7e-25 119.4 107 57.0
Gorai.007G117900 Gossypium raimondii HOM05D005434 ORTHO05D006412 3.0e-25 118.6 109 56.9
Gohir.A07G131800 Gossypium hirsutum HOM05D005434 ORTHO05D006412 3.9e-25 118.2 107 57.9
Nitab4.5_0003092g0060 Nicotiana tabacum HOM05D005434 ORTHO05D006412 3.9e-25 118.2 140 48.6
Nn3g21972 Nelumbo nucifera HOM05D005434 ORTHO05D006412 8.6e-25 117.1 107 60.7
Sc17g0000050 Simmondsia chinensis HOM05D005434 ORTHO05D006412 1.5e-24 116.3 106 58.5
CsaV3_6G012840 Cucumis sativus L. HOM05D005434 ORTHO05D006412 2.5e-24 115.5 107 57.0
Duzib133G0025 Durio zibethinus HOM05D005434 ORTHO05D006412 6.2e-23 110.9 89 61.8
MELO3C013628.2 Cucumis melo HOM05D005434 ORTHO05D006412 3.1e-22 108.6 107 56.1
AT2G46980 Arabidopsis thaliana HOM05D005434 ORTHO05D006412 5.2e-22 107.8 106 49.1
Carub.0004s2971 Capsella rubella HOM05D005434 ORTHO05D006412 5.2e-22 107.8 106 48.1
Thhalv10001318m.g Eutrema salsugineum HOM05D005434 ORTHO05D006412 5.2e-22 107.8 106 50.0
MBI19_g04828_MAGBIO Magnolia biondii HOM05D005434 ORTHO05D006412 1.2e-21 106.7 107 55.1
Zm00001eb233800 Zea mays HOM05D005434 ORTHO05D006412 1.5e-21 106.3 105 50.5
Os10g0405500 Oryza sativa ssp. japonica HOM05D005434 ORTHO05D006412 2.0e-21 105.9 105 51.4
arahy.Tifrunner.gnm1.ann1.G6BN46 Arachis hypogaea HOM05D005434 ORTHO05D006412 7.6e-21 104.0 149 40.9
C04p00990 Brassica napus HOM05D005434 ORTHO05D006412 7.6e-21 104.0 106 47.2
BraA05t19085Z Brassica rapa HOM05D005434 ORTHO05D006412 7.6e-21 104.0 106 47.2
BcaC02g12619 Brassica carinata HOM05D005434 ORTHO05D006412 1.3e-20 103.2 106 47.2
BolC4t21751H Brassica oleracea HOM05D005434 ORTHO05D006412 1.3e-20 103.2 106 47.2
CARHR142350 Cardamine hirsuta HOM05D005434 ORTHO05D006412 1.7e-20 102.8 106 46.2
AL4G46460 Arabidopsis lyrata HOM05D005434 ORTHO05D006412 3.8e-20 101.7 106 46.2
SGA_v2.0_scaffold310G48189 Striga asiatica HOM05D005434 ORTHO05D006412 3.8e-20 101.7 106 52.8
Sp4g28980 Schrenkiella parvula HOM05D005434 ORTHO05D006412 1.1e-19 100.1 106 46.2
Gohir.D07G136100 Gossypium hirsutum HOM05D005434 ORTHO05D006412 3.2e-19 98.6 84 58.3
BcaC02g12826 Brassica carinata HOM05D005434 ORTHO05D006412 5.4e-19 97.8 106 45.3
Aa31LG1G28350 Aethionema arabicum HOM05D005434 ORTHO05D006412 7.1e-19 97.4 106 46.2
Migut.D00008 Erythranthe guttata HOM05D005434 ORTHO05D006412 9.2e-19 97.1 105 49.5
CDE02G0039 Ceratophyllum demersum HOM05D005434 ORTHO05D006412 1.2e-18 96.7 100 55.0
HPP92_011320 Vanilla planifolia HOM05D005434 ORTHO05D006412 2.1e-18 95.9 107 50.5
FAN28G1136 Fragaria x ananassa HOM05D005434 ORTHO05D006412 3.5e-18 95.1 68 73.5
AUR62024551 Chenopodium quinoa HOM05D005434 ORTHO05D006412 1.3e-17 93.2 106 52.8
A05p00820 Brassica napus HOM05D005434 ORTHO05D006412 3.9e-17 91.7 84 50.0
Eucgr.K00557 Eucalyptus grandis HOM05D005434 ORTHO05D006412 2.5e-16 89.0 103 48.5
BcaB07g33880 Brassica carinata HOM05D005434 ORTHO05D006412 2.8e-15 85.5 105 41.0
PGSC0003DMG400023095 Solanum tuberosum HOM05D005434 ORTHO05D007977 2.8e-15 85.5 73 54.8
unitig_62.g23901 Utricularia gibba HOM05D005434 ORTHO05D006412 1.1e-14 83.6 107 42.1
SGA_v2.0_scaffold417G51248 Striga asiatica HOM05D005434 ORTHO05D006412 6.4e-12 74.3 189 31.7
SEGI_30180 Sequoiadendron giganteum HOM05D005434 ORTHO05D006412 1.7e-09 66.2 91 39.6
CDE08G1326 Ceratophyllum demersum HOM05D005434 ORTHO05D006412 7.3e-08 60.8 63 49.2
Oeu052591.1 Olea europaea HOM05D005434 ORTHO05D006412 3.6e-07 58.5 49 61.2
BcaC01g05050 Brassica carinata HOM05D005434 ORTHO05D006412 1.8e-06 56.2 54 48.1


User provided reference genes

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