Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33148 Davidia involucrata HOM05D007601 ORTHO05D009605 2.8e-70 268.5 131 100.0
CSS0043622 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 5.6e-55 217.6 126 82.5
CSS0036648 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 1.2e-54 216.5 126 81.7
CiPaw.07G121600 Carya illinoinensis HOM05D007601 ORTHO05D009605 4.0e-53 211.5 129 79.1
Gohir.A11G107400 Gossypium hirsutum HOM05D007601 ORTHO05D009605 1.2e-52 209.9 131 77.9
COL.COLO4_23178 Corchorus olitorius HOM05D007601 ORTHO05D009605 2.6e-52 208.8 131 77.1
MD17G1280000 Malus domestica HOM05D007601 ORTHO05D009605 7.6e-52 207.2 128 76.6
QL12p018497 Quercus lobata HOM05D007601 ORTHO05D009605 9.9e-52 206.8 128 75.8
Manes.01G231900 Manihot esculenta HOM05D007601 ORTHO05D009605 1.3e-51 206.5 120 80.8
Hma1.2p1_0965F.1_g242190 Hydrangea macrophylla HOM05D007601 ORTHO05D009605 1.7e-51 206.1 132 77.3
Thecc.01G320300 Theobroma cacao HOM05D007601 ORTHO05D009605 2.2e-51 205.7 131 77.9
arahy.Tifrunner.gnm1.ann1.UJ54IQ Arachis hypogaea HOM05D007601 ORTHO05D009605 1.1e-50 203.4 120 78.3
Gohir.D11G112200 Gossypium hirsutum HOM05D007601 ORTHO05D009605 1.1e-50 203.4 119 80.7
Potri.002G191200 Populus trichocarpa HOM05D007601 ORTHO05D009605 1.1e-50 203.4 120 80.8
Duzib138G1106 Durio zibethinus HOM05D007601 ORTHO05D009605 1.9e-50 202.6 131 75.6
arahy.Tifrunner.gnm1.ann1.FU6CGW Arachis hypogaea HOM05D007601 ORTHO05D009605 5.4e-50 201.1 120 77.5
Sabra02G0164400 Salix brachista HOM05D007601 ORTHO05D009605 1.6e-49 199.5 120 78.3
MD09G1287800 Malus domestica HOM05D007601 ORTHO05D009605 2.7e-49 198.7 118 79.7
MSTRG.18076 Avicennia marina HOM05D007601 ORTHO05D009605 4.6e-49 198.0 131 74.8
TWI59G0276 Tripterygium wilfordii HOM05D007601 ORTHO05D009605 4.6e-49 198.0 120 79.2
Medtr7g109980 Medicago truncatula HOM05D007601 ORTHO05D009605 6.0e-49 197.6 121 76.0
Prupe.3G005400 Prunus persica HOM05D007601 ORTHO05D009605 6.0e-49 197.6 120 76.7
GSVIVG01028182001 Vitis vinifera HOM05D007601 ORTHO05D009605 6.0e-49 197.6 120 75.8
Atru.chr5.923 Acer truncatum HOM05D007601 ORTHO05D009605 7.8e-49 197.2 120 76.7
THA.LOC104815915 Tarenaya hassleriana HOM05D007601 ORTHO05D009605 1.3e-48 196.4 122 73.8
TAR633G2747 Trochodendron aralioides HOM05D007601 ORTHO05D009605 2.3e-48 195.7 120 76.7
Glyma.03G222200 Glycine max HOM05D007601 ORTHO05D009605 3.0e-48 195.3 121 75.2
Ciclev10022849m.g Citrus clementina HOM05D007601 ORTHO05D009605 3.9e-48 194.9 131 73.3
VMungo1383G2396 Vigna mungo HOM05D007601 ORTHO05D009605 6.6e-48 194.1 121 76.9
Glyma.19G219400 Glycine max HOM05D007601 ORTHO05D009605 1.1e-47 193.4 120 75.0
Ca_09231_v3 Cicer arietinum L. HOM05D007601 ORTHO05D009605 1.5e-47 193.0 121 75.2
Migut.D00044 Erythranthe guttata HOM05D007601 ORTHO05D009605 1.9e-47 192.6 132 73.5
DCAR_002918 Daucus carota HOM05D007601 ORTHO05D009605 2.5e-47 192.2 120 76.7
Psat3g018760 Pisum sativum HOM05D007601 ORTHO05D009605 4.3e-47 191.4 121 75.2
FAN26G1400 Fragaria x ananassa HOM05D007601 ORTHO05D009605 5.6e-47 191.0 120 75.8
Lalb_Chr04g0260071 Lupinus albus HOM05D007601 ORTHO05D009605 5.6e-47 191.0 121 74.4
Sed0008912 Sechium edule HOM05D007601 ORTHO05D009605 7.3e-47 190.7 120 70.8
Phvul.001G215600 Phaseolus vulgaris HOM05D007601 ORTHO05D009605 1.2e-46 189.9 121 73.6
Rhsim01G0292900 Rhododendron simsii HOM05D007601 ORTHO05D009605 1.6e-46 189.5 120 76.7
Eucgr.H00897 Eucalyptus grandis HOM05D007601 ORTHO05D009605 2.1e-46 189.1 127 72.4
FvH4_1g26600 Fragaria vesca HOM05D007601 ORTHO05D009605 2.1e-46 189.1 120 75.8
Sopen06g036000 Solanum pennellii HOM05D007601 ORTHO05D009605 2.8e-46 188.7 127 71.7
Cpa.g.c29544.1 Carica papaya HOM05D007601 ORTHO05D009605 3.6e-46 188.3 120 73.3
Aa31LG5G1450 Aethionema arabicum HOM05D007601 ORTHO05D009605 4.7e-46 188.0 120 70.8
CsaV3_3G031680 Cucumis sativus L. HOM05D007601 ORTHO05D009605 4.7e-46 188.0 120 71.7
Oeu044742.1 Olea europaea HOM05D007601 ORTHO05D009605 6.2e-46 187.6 131 70.2
Sc14g0006440 Simmondsia chinensis HOM05D007601 ORTHO05D009605 6.2e-46 187.6 120 75.0
RcHm_v2.0_Chr3g0486741 Rosa chinensis HOM05D007601 ORTHO05D009605 8.1e-46 187.2 120 78.3
TPR.G4122 Trifolium pratense HOM05D007601 ORTHO05D009605 8.1e-46 187.2 121 71.9
Lj1g0003568 Lotus japonicus HOM05D007601 ORTHO05D009605 3.1e-45 185.3 117 73.5
CANSAT25G0069 Cannabis sativa HOM05D007601 ORTHO05D009605 1.2e-44 183.3 126 71.4
PSO210G6513 Papaver somniferum HOM05D007601 ORTHO05D009605 4.4e-44 181.4 117 72.6
ClCG10G011680 Citrullus lanatus HOM05D007601 ORTHO05D009605 9.9e-44 180.3 141 63.1
Gorai.007G120500 Gossypium raimondii HOM05D007601 ORTHO05D009605 9.9e-44 180.3 111 78.4
Thhalv10029076m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 1.7e-43 179.5 120 68.3
Sp6g01760 Schrenkiella parvula HOM05D007601 ORTHO05D009605 2.2e-43 179.1 123 65.9
BcaB01g02392 Brassica carinata HOM05D007601 ORTHO05D009605 4.9e-43 177.9 120 66.7
BraA03t12322Z Brassica rapa HOM05D007601 ORTHO05D009605 6.4e-43 177.6 115 68.7
HanXRQChr01g0010181 Helianthus annuus HOM05D007601 ORTHO05D009605 6.4e-43 177.6 120 68.3
A03p31410 Brassica napus HOM05D007601 ORTHO05D009605 8.4e-43 177.2 115 68.7
BcaC01g06793 Brassica carinata HOM05D007601 ORTHO05D009605 1.1e-42 176.8 118 66.9
BcaC01g06795 Brassica carinata HOM05D007601 ORTHO05D009605 1.1e-42 176.8 118 66.9
C03p38320 Brassica napus HOM05D007601 ORTHO05D009605 1.1e-42 176.8 118 66.9
BolC3t16113H Brassica oleracea HOM05D007601 ORTHO05D009605 1.1e-42 176.8 118 66.9
Carub.0006s3532 Capsella rubella HOM05D007601 ORTHO05D009605 1.1e-42 176.8 120 67.5
AL6G51380 Arabidopsis lyrata HOM05D007601 ORTHO05D009605 2.4e-42 175.6 120 65.0
ECA248G1243 Erigeron canadensis HOM05D007601 ORTHO05D009605 3.2e-42 175.3 122 65.6
FAN19G1881 Fragaria x ananassa HOM05D007601 ORTHO05D009605 5.4e-42 174.5 147 61.9
EL10As5g23595 Beta vulgaris HOM05D007601 ORTHO05D009605 9.3e-42 173.7 131 62.6
CARHR249870 Cardamine hirsuta HOM05D007601 ORTHO05D009605 1.2e-41 173.3 120 63.3
PSO761G0263 Papaver somniferum HOM05D007601 ORTHO05D009605 2.1e-41 172.6 117 70.1
Aqoxy2G02617 Aquilegia oxysepala HOM05D007601 ORTHO05D009605 3.9e-40 168.3 122 66.4
Hund09590 Selenicereus undatus HOM05D007601 ORTHO05D009605 5.1e-40 167.9 131 61.8
MELO3C012921.2 Cucumis melo HOM05D007601 ORTHO05D009605 1.1e-39 166.8 99 76.8
AT4G01897 Arabidopsis thaliana HOM05D007601 ORTHO05D009605 1.5e-39 166.4 120 61.7
AUR62011748 Chenopodium quinoa HOM05D007601 ORTHO05D009605 1.5e-39 166.4 120 62.5
Cc01_g21960 Coffea canephora HOM05D007601 ORTHO05D009605 7.3e-39 164.1 122 65.6
FAN28G1650 Fragaria x ananassa HOM05D007601 ORTHO05D009605 7.3e-39 164.1 95 81.1
CAN.G1209.15 Capsicum annuum HOM05D007601 ORTHO05D009605 1.3e-38 163.3 124 63.7
Zm00001eb043090 Zea mays HOM05D007601 ORTHO05D009605 4.8e-38 161.4 117 63.2
Nn4g25447 Nelumbo nucifera HOM05D007601 ORTHO05D009605 4.2e-34 148.3 120 62.5
Os03g0564200 Oryza sativa ssp. japonica HOM05D007601 ORTHO05D009605 4.2e-34 148.3 114 62.3
SalBow6G1877 Salvia bowleyana HOM05D007601 ORTHO05D009605 8.1e-30 134.0 79 77.2
Pp3c1_30400 Physcomitrium patens HOM05D007601 ORTHO05D009605 3.4e-28 128.6 117 52.1
AUR62024591 Chenopodium quinoa HOM05D007601 ORTHO05D009605 9.9e-28 127.1 120 51.7
FAN23G1483 Fragaria x ananassa HOM05D007601 ORTHO05D009605 1.3e-27 126.7 80 76.2
Solyc06g084625.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 1.3e-27 126.7 80 75.0
MBI19_g32697_MAGBIO Magnolia biondii HOM05D007601 ORTHO05D009605 1.0e-24 117.1 84 67.9
AagrBONN_evm.TU.Sc2ySwM_228.1634 Anthoceros agrestis HOM05D007601 ORTHO05D009605 4.3e-23 111.7 119 46.2
vmacro15096 Vaccinium macrocarpon HOM05D007601 ORTHO05D009605 8.1e-22 107.5 59 83.1
Mapoly0105s0007 Marchantia polymorpha HOM05D007601 ORTHO05D009605 1.0e-19 100.5 112 47.3
CDE05G3673 Ceratophyllum demersum HOM05D007601 ORTHO05D009605 1.1e-18 97.1 85 58.8
SMO196G0166 Selaginella moellendorffii HOM05D007601 ORTHO05D009605 1.3e-14 83.6 102 45.1
Thhalv10009552m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 2.0e-12 76.3 85 48.2
CBR_g40435 Chara braunii HOM05D007601 ORTHO05D009605 1.4e-10 70.1 92 46.7
Solyc04g150173.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 4.2e-10 68.6 48 66.7
Dinv41599 Davidia involucrata HOM05D000011 ORTHO05D009225 2.2e-06 56.2 31 83.9


User provided reference genes

Program Settings