Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33147 Davidia involucrata HOM05D006913 ORTHO05D008720 1.2e-109 399.8 204 100.0
Dinv12109 Davidia involucrata HOM05D006913 ORTHO05D008720 5.1e-79 298.1 207 78.3
CSS0007691 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 2.0e-75 286.2 201 76.1
CSS0013168 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 1.7e-74 283.1 201 75.6
Hma1.2p1_0408F.1_g146440 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 3.5e-72 275.4 204 73.5
TWI59G1195 Tripterygium wilfordii HOM05D006913 ORTHO05D008720 1.6e-69 266.5 201 70.1
CiPaw.07G121500 Carya illinoinensis HOM05D006913 ORTHO05D008720 6.2e-69 264.6 197 71.1
TAR362G1022 Trochodendron aralioides HOM05D006913 ORTHO05D008720 6.2e-69 264.6 193 72.0
Haze_05096 Corylus avellana HOM05D006913 ORTHO05D008720 2.4e-68 262.7 195 70.8
Thecc.01G320200 Theobroma cacao HOM05D006913 ORTHO05D008720 9.0e-68 260.8 193 72.0
Cfa004859 Carpinus fangiana HOM05D006913 ORTHO05D008720 1.5e-67 260.0 195 69.2
Prupe.3G005300 Prunus persica HOM05D006913 ORTHO05D008720 4.4e-67 258.5 191 70.7
Duzib138G1774 Durio zibethinus HOM05D006913 ORTHO05D008720 1.7e-66 256.5 196 71.4
GSVIVG01028181001 Vitis vinifera HOM05D006913 ORTHO05D008720 1.1e-65 253.8 193 70.5
PGSC0003DMG400007277 Solanum tuberosum HOM05D006913 ORTHO05D008720 3.2e-65 252.3 187 73.3
Solyc06g009400.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 4.6e-64 248.4 186 73.1
Sopen06g004130 Solanum pennellii HOM05D006913 ORTHO05D008720 4.6e-64 248.4 194 69.6
MD09G1287900 Malus domestica HOM05D006913 ORTHO05D008720 7.9e-64 247.7 190 67.4
MD17G1280100 Malus domestica HOM05D006913 ORTHO05D008720 1.3e-63 246.9 191 66.5
Migut.D00043 Erythranthe guttata HOM05D006913 ORTHO05D008720 1.7e-63 246.5 191 70.7
Manes.01G231800 Manihot esculenta HOM05D006913 ORTHO05D008720 1.7e-63 246.5 188 68.6
FAN28G1862 Fragaria x ananassa HOM05D006913 ORTHO05D008720 3.0e-63 245.7 201 63.7
QL12p018506 Quercus lobata HOM05D006913 ORTHO05D008720 3.9e-63 245.4 194 69.1
Ciclev10022378m.g Citrus clementina HOM05D006913 ORTHO05D008720 5.1e-63 245.0 187 71.7
RcHm_v2.0_Chr3g0486731 Rosa chinensis HOM05D006913 ORTHO05D008720 1.1e-62 243.8 201 64.7
FvH4_1g26590 Fragaria vesca HOM05D006913 ORTHO05D008720 5.6e-62 241.5 201 63.2
PSO724G1078 Papaver somniferum HOM05D006913 ORTHO05D008720 5.6e-62 241.5 188 67.0
Nn3g21840 Nelumbo nucifera HOM05D006913 ORTHO05D008720 9.6e-62 240.7 193 66.3
PSO170G2504 Papaver somniferum HOM05D006913 ORTHO05D008720 1.3e-61 240.4 188 66.5
Medtr7g109970 Medicago truncatula HOM05D006913 ORTHO05D008720 1.6e-61 240.0 182 68.7
Nitab4.5_0000363g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 4.8e-61 238.4 189 70.4
Glyma.19G219300 Glycine max HOM05D006913 ORTHO05D008720 6.2e-61 238.0 183 67.2
Nitab4.5_0003324g0110 Nicotiana tabacum HOM05D006913 ORTHO05D008720 6.2e-61 238.0 189 69.3
MSTRG.21716 Avicennia marina HOM05D006913 ORTHO05D008720 1.4e-60 236.9 200 66.5
VMungo1383G0882 Vigna mungo HOM05D006913 ORTHO05D008720 1.8e-60 236.5 183 68.3
Sed0008492 Sechium edule HOM05D006913 ORTHO05D008720 3.1e-60 235.7 198 63.6
Atru.chr5.924 Acer truncatum HOM05D006913 ORTHO05D008720 9.0e-60 234.2 204 65.7
Cpa.g.c29544.2 Carica papaya HOM05D006913 ORTHO05D008720 3.4e-59 232.3 203 62.6
CiPaw.08G086000 Carya illinoinensis HOM05D006913 ORTHO05D008720 4.5e-59 231.9 187 69.0
CAN.G1280.40 Capsicum annuum HOM05D006913 ORTHO05D008720 5.8e-59 231.5 198 66.7
ATR0693G068 Amborella trichopoda HOM05D006913 ORTHO05D008720 7.6e-59 231.1 149 77.2
TPR.G4038 Trifolium pratense HOM05D006913 ORTHO05D008720 9.9e-59 230.7 183 66.7
Aqoxy5G02741 Aquilegia oxysepala HOM05D006913 ORTHO05D008720 1.3e-58 230.3 197 62.4
Psat3g018680 Pisum sativum HOM05D006913 ORTHO05D008720 1.7e-58 229.9 173 69.9
Potri.002G191300 Populus trichocarpa HOM05D006913 ORTHO05D008720 2.9e-58 229.2 209 62.7
PGR083G1650 Punica granatum HOM05D006913 ORTHO05D008720 8.4e-58 227.6 217 59.4
Rhsim01G0292800 Rhododendron simsii HOM05D006913 ORTHO05D008720 8.4e-58 227.6 222 63.1
Nitab4.5_0000222g0190 Nicotiana tabacum HOM05D006913 ORTHO05D008720 1.1e-57 227.3 186 68.8
Lj1g0024926 Lotus japonicus HOM05D006913 ORTHO05D008720 1.4e-57 226.9 160 73.8
FAN26G0114 Fragaria x ananassa HOM05D006913 ORTHO05D008720 1.9e-57 226.5 233 54.9
MELO3C023629.2 Cucumis melo HOM05D006913 ORTHO05D008720 2.4e-57 226.1 189 64.6
Sed0005932 Sechium edule HOM05D006913 ORTHO05D008720 2.1e-56 223.0 185 66.5
Glyma.03G222100 Glycine max HOM05D006913 ORTHO05D008720 3.5e-56 222.2 202 61.4
Peaxi162Scf00058g00218 Petunia axillaris HOM05D006913 ORTHO05D008720 4.6e-56 221.9 187 68.4
CsaV3_7G030270 Cucumis sativus L. HOM05D006913 ORTHO05D008720 6.0e-56 221.5 176 66.5
MBI18_g09652_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 1.0e-55 220.7 158 72.2
Sc05g0000220 Simmondsia chinensis HOM05D006913 ORTHO05D008720 1.8e-55 219.9 167 66.5
FAN19G0677 Fragaria x ananassa HOM05D006913 ORTHO05D008720 2.3e-55 219.5 233 54.1
MBI18_g11536_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 3.9e-55 218.8 157 72.6
arahy.Tifrunner.gnm1.ann1.6PPK8V Arachis hypogaea HOM05D006913 ORTHO05D008720 6.7e-55 218.0 159 74.2
THA.LOC104801315 Tarenaya hassleriana HOM05D006913 ORTHO05D008720 1.1e-54 217.2 159 71.7
Lalb_Chr04g0260061 Lupinus albus HOM05D006913 ORTHO05D008720 1.9e-54 216.5 152 75.0
Carub.0006s3531 Capsella rubella HOM05D006913 ORTHO05D008720 7.4e-54 214.5 196 62.2
SalBow3G0392 Salvia bowleyana HOM05D006913 ORTHO05D008720 9.6e-54 214.2 152 73.7
unitig_578.g16634 Utricularia gibba HOM05D006913 ORTHO05D008720 9.6e-54 214.2 174 66.7
HPP92_002654 Vanilla planifolia HOM05D006913 ORTHO05D008720 9.6e-54 214.2 161 70.2
Sabra02G0164300 Salix brachista HOM05D006913 ORTHO05D008720 1.6e-53 213.4 235 54.9
ClCG09G004810 Citrullus lanatus HOM05D006913 ORTHO05D008720 2.8e-53 212.6 217 57.6
Cc01_g21970 Coffea canephora HOM05D006913 ORTHO05D008720 2.8e-53 212.6 171 68.4
AT4G01900 Arabidopsis thaliana HOM05D006913 ORTHO05D008720 4.8e-53 211.8 152 73.0
Aa31LG5G1440 Aethionema arabicum HOM05D006913 ORTHO05D008720 6.2e-53 211.5 197 62.4
CDE11G0810 Ceratophyllum demersum HOM05D006913 ORTHO05D008720 1.1e-52 210.7 169 64.5
AL6G51370 Arabidopsis lyrata HOM05D006913 ORTHO05D008720 2.4e-52 209.5 145 73.8
DCAR_002917 Daucus carota HOM05D006913 ORTHO05D008720 4.0e-52 208.8 202 57.9
Sp6g01770 Schrenkiella parvula HOM05D006913 ORTHO05D008720 4.0e-52 208.8 196 62.2
BcaB01g02398 Brassica carinata HOM05D006913 ORTHO05D008720 3.4e-51 205.7 173 65.9
Os05g0133100 Oryza sativa ssp. japonica HOM05D006913 ORTHO05D008720 5.8e-51 204.9 148 71.6
Thhalv10028983m.g Eutrema salsugineum HOM05D006913 ORTHO05D008720 2.9e-50 202.6 152 71.1
BraA03t12321Z Brassica rapa HOM05D006913 ORTHO05D008720 6.5e-50 201.4 173 64.7
A03p31400 Brassica napus HOM05D006913 ORTHO05D008720 1.1e-49 200.7 158 68.4
BcaC01g06792 Brassica carinata HOM05D006913 ORTHO05D008720 3.2e-49 199.1 145 72.4
C03p38310 Brassica napus HOM05D006913 ORTHO05D008720 3.2e-49 199.1 145 72.4
BolC3t16112H Brassica oleracea HOM05D006913 ORTHO05D008720 3.2e-49 199.1 145 72.4
arahy.Tifrunner.gnm1.ann1.IRZ7G5 Arachis hypogaea HOM05D006913 ORTHO05D008720 6.0e-48 194.9 179 63.1
BcaB01g02393 Brassica carinata HOM05D006913 ORTHO05D008720 1.1e-46 190.7 137 73.7
vmacro15097 Vaccinium macrocarpon HOM05D006913 ORTHO05D008720 1.1e-46 190.7 247 53.0
Pp3c4_15530 Physcomitrium patens HOM05D006913 ORTHO05D008720 5.7e-46 188.3 142 68.3
Mapoly0061s0127 Marchantia polymorpha HOM05D006913 ORTHO05D008720 1.2e-43 180.6 135 68.1
Lj1C13T3 Lonicera japonica HOM05D006913 ORTHO05D008720 5.9e-43 178.3 113 84.1
Eucgr.H00899 Eucalyptus grandis HOM05D006913 ORTHO05D008720 6.5e-42 174.9 195 56.4
SGA_v2.0_scaffold80G25710 Striga asiatica HOM05D006913 ORTHO05D008720 1.4e-41 173.7 123 72.4
Solyc01g015000.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 1.2e-40 170.6 114 82.5
COL.COLO4_23180 Corchorus olitorius HOM05D006913 ORTHO05D008720 1.8e-39 166.8 111 80.2
AUR62024592 Chenopodium quinoa HOM05D006913 ORTHO05D008720 2.3e-39 166.4 187 54.0
AagrBONN_evm.TU.Sc2ySwM_228.182 Anthoceros agrestis HOM05D006913 ORTHO05D008720 8.7e-39 164.5 129 65.9
FAN23G2363 Fragaria x ananassa HOM05D000049 ORTHO05D000027 9.7e-38 161.0 239 46.0
Phvul.001G215500 Phaseolus vulgaris HOM05D006913 ORTHO05D008720 4.8e-37 158.7 121 66.1
SEGI_19322 Sequoiadendron giganteum HOM05D006913 ORTHO05D008720 4.8e-37 158.7 103 76.7
Oeu038057.1 Olea europaea HOM05D006913 ORTHO05D008720 1.2e-35 154.1 203 48.8
Hund09668 Selenicereus undatus HOM05D006913 ORTHO05D008720 4.5e-35 152.1 170 54.7
Ca_09230_v3 Cicer arietinum L. HOM05D006913 ORTHO05D008720 7.7e-35 151.4 104 76.9
SMO364G0946 Selaginella moellendorffii HOM05D006913 ORTHO05D008720 1.9e-33 146.7 109 69.7
Duzib211G0548 Durio zibethinus HOM05D006913 ORTHO05D008720 3.3e-30 136.0 109 67.0
Cre07.g357350 Chlamydomonas reinhardtii HOM05D006913 ORTHO05D008720 1.1e-28 131.0 153 47.1
Eucgr.L01805 Eucalyptus grandis HOM05D006913 ORTHO05D008720 1.5e-27 127.1 126 60.3
GSVIVG01010608001 Vitis vinifera HOM05D006913 ORTHO05D008720 1.3e-26 124.0 71 91.5
GSVIVG01037028001 Vitis vinifera HOM05D006913 ORTHO05D008720 1.3e-26 124.0 71 91.5
MCO04G045 Micromonas commoda HOM05D006913 ORTHO05D008720 6.5e-26 121.7 136 50.0
CARHR249910 Cardamine hirsuta HOM05D006913 ORTHO05D008720 1.6e-24 117.1 86 73.3
Hma1.2p1_3252F.1_g334540 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 2.1e-24 116.7 139 51.8
Nitab4.5_0001013g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 2.1e-24 116.7 83 71.1
HPP92_027922 Vanilla planifolia HOM05D006913 ORTHO05D008720 3.5e-19 99.4 79 60.8
HPP92_027923 Vanilla planifolia HOM05D006913 ORTHO05D008720 3.5e-19 99.4 74 73.0
Haze_27360 Corylus avellana HOM05D006913 ORTHO05D008720 1.3e-13 80.9 102 37.3
C09p01450 Brassica napus HOM05D006913 ORTHO05D008720 1.2e-08 64.3 39 76.9
BolC9t53077H Brassica oleracea HOM05D006913 ORTHO05D008720 1.2e-08 64.3 39 76.9


User provided reference genes

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