Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33051 Davidia involucrata HOM05D005645 ORTHO05D007156 6.6e-276 953.4 463 100.0
Dinv19699 Davidia involucrata HOM05D005645 ORTHO05D007156 1.4e-161 573.5 318 85.5
CSS0005125 Camellia sinensis var. sinensis HOM05D005645 ORTHO05D007156 1.3e-154 550.4 310 84.2
Hma1.2p1_0491F.1_g164480 Hydrangea macrophylla HOM05D005645 ORTHO05D007156 2.7e-152 542.7 326 82.5
Actinidia21051 Actinidia chinensis HOM05D005645 ORTHO05D007156 1.5e-147 526.9 310 81.0
Cc01_g20770 Coffea canephora HOM05D005645 ORTHO05D007156 2.8e-141 506.1 308 78.9
CSS0029794 Camellia sinensis var. sinensis HOM05D005645 ORTHO05D007156 8.1e-141 504.6 310 79.0
Lj2P1193T28 Lonicera japonica HOM05D005645 ORTHO05D007156 4.6e-136 488.8 313 75.1
Atru.chr5.1154 Acer truncatum HOM05D005645 ORTHO05D007156 5.1e-135 485.3 310 74.8
Rhsim01G0284600 Rhododendron simsii HOM05D005645 ORTHO05D007156 5.1e-135 485.3 317 75.1
Manes.05G062500 Manihot esculenta HOM05D005645 ORTHO05D007156 8.7e-135 484.6 312 75.3
PGR119G1100 Punica granatum HOM05D005645 ORTHO05D007156 2.1e-133 479.9 313 73.2
Ciclev10021114m.g Citrus clementina HOM05D005645 ORTHO05D007156 2.8e-133 479.6 313 71.9
MD03G1287400 Malus domestica HOM05D005645 ORTHO05D007156 6.2e-133 478.4 326 71.5
Thecc.01G299500 Theobroma cacao HOM05D005645 ORTHO05D007156 1.1e-132 477.6 315 74.0
Duzib138G1290 Durio zibethinus HOM05D005645 ORTHO05D007156 4.0e-132 475.7 314 73.9
Gohir.D08G085100 Gossypium hirsutum HOM05D005645 ORTHO05D007156 2.2e-130 469.9 316 72.5
COL.COLO4_23354 Corchorus olitorius HOM05D005645 ORTHO05D007156 4.9e-130 468.8 312 73.1
MBI19_g25350_MAGBIO Magnolia biondii HOM05D005645 ORTHO05D007156 1.1e-129 467.6 320 70.6
CANSAT25G0541 Cannabis sativa HOM05D005645 ORTHO05D007156 1.9e-129 466.8 312 70.5
Gohir.A08G075600 Gossypium hirsutum HOM05D005645 ORTHO05D007156 5.4e-129 465.3 316 72.2
Nn4g25798 Nelumbo nucifera HOM05D005645 ORTHO05D007156 5.4e-129 465.3 312 71.5
CiPaw.08G095700 Carya illinoinensis HOM05D005645 ORTHO05D007156 9.3e-129 464.5 316 70.3
Gorai.004G089600 Gossypium raimondii HOM05D005645 ORTHO05D007156 9.3e-129 464.5 316 71.8
Duzib133G0671 Durio zibethinus HOM05D005645 ORTHO05D007156 1.2e-128 464.2 315 72.1
TWI23G0499 Tripterygium wilfordii HOM05D005645 ORTHO05D007156 3.9e-127 459.1 317 70.3
TAR365G0052 Trochodendron aralioides HOM05D005645 ORTHO05D007156 3.9e-127 459.1 310 71.9
ClCG10G010870 Citrullus lanatus HOM05D005645 ORTHO05D007156 6.6e-127 458.4 315 71.1
DCAR_002826 Daucus carota HOM05D005645 ORTHO05D007156 6.6e-127 458.4 328 68.6
Prupe.8G260500 Prunus persica HOM05D005645 ORTHO05D007156 1.9e-126 456.8 311 71.7
MD11G1310800 Malus domestica HOM05D005645 ORTHO05D007156 5.6e-126 455.3 331 66.8
Nitab4.5_0001879g0020 Nicotiana tabacum HOM05D005645 ORTHO05D007156 1.3e-125 454.1 309 73.1
Cpa.g.c27813 Carica papaya HOM05D005645 ORTHO05D007156 2.1e-125 453.4 307 70.7
CsaV3_4G000750 Cucumis sativus L. HOM05D005645 ORTHO05D007156 2.1e-125 453.4 320 69.7
Lsat_1_v5_gn_5_191140 Lactuca sativa HOM05D005645 ORTHO05D007156 2.1e-125 453.4 318 68.9
Sed0014780 Sechium edule HOM05D005645 ORTHO05D007156 2.8e-125 453.0 310 70.3
Duzib211G0390 Durio zibethinus HOM05D005645 ORTHO05D007156 3.6e-125 452.6 315 70.2
Eucgr.H01116 Eucalyptus grandis HOM05D005645 ORTHO05D007156 6.2e-125 451.8 330 66.1
Sopen09g029900 Solanum pennellii HOM05D005645 ORTHO05D007156 1.4e-124 450.7 309 71.2
Potri.002G205150 Populus trichocarpa HOM05D005645 ORTHO05D007156 1.8e-124 450.3 320 70.0
PGSC0003DMG400011401 Solanum tuberosum HOM05D005645 ORTHO05D007156 2.4e-124 449.9 309 71.8
RcHm_v2.0_Chr6g0293871 Rosa chinensis HOM05D005645 ORTHO05D007156 4.0e-124 449.1 306 69.3
Actinidia24827 Actinidia chinensis HOM05D005645 ORTHO05D007156 1.2e-123 447.6 272 79.0
Sabra02G0154200 Salix brachista HOM05D005645 ORTHO05D007156 2.0e-123 446.8 320 70.0
Solyc09g075080.3 Solanum lycopersicum HOM05D005645 ORTHO05D007156 4.5e-123 445.7 309 70.6
Peaxi162Scf00001g00452 Petunia axillaris HOM05D005645 ORTHO05D007156 2.9e-122 443.0 312 70.5
TAR370G0004 Trochodendron aralioides HOM05D005645 ORTHO05D007156 3.8e-122 442.6 313 68.7
Cfa005921 Carpinus fangiana HOM05D005645 ORTHO05D007156 4.9e-122 442.2 324 67.9
Potri.014G130000 Populus trichocarpa HOM05D005645 ORTHO05D007156 4.9e-122 442.2 322 67.4
CAN.G1628.1 Capsicum annuum HOM05D005645 ORTHO05D007156 8.4e-122 441.4 311 69.8
CiPaw.07G108000 Carya illinoinensis HOM05D005645 ORTHO05D007156 8.4e-122 441.4 314 68.5
Lsat_1_v5_gn_8_53521 Lactuca sativa HOM05D005645 ORTHO05D007156 1.9e-121 440.3 319 68.0
Sabra14G0096600 Salix brachista HOM05D005645 ORTHO05D007156 3.2e-121 439.5 320 66.9
Gohir.A12G130800 Gossypium hirsutum HOM05D005645 ORTHO05D007156 5.5e-121 438.7 314 68.2
Gorai.008G145600 Gossypium raimondii HOM05D005645 ORTHO05D007156 5.5e-121 438.7 314 68.2
HanXRQChr04g0118021 Helianthus annuus HOM05D005645 ORTHO05D007156 1.2e-120 437.6 320 67.2
SalBow3G0280 Salvia bowleyana HOM05D005645 ORTHO05D007156 3.5e-120 436.0 320 67.2
Aqoxy2G02954 Aquilegia oxysepala HOM05D005645 ORTHO05D007156 7.9e-120 434.9 310 68.7
QL12p028562 Quercus lobata HOM05D005645 ORTHO05D007156 2.3e-119 433.3 319 67.1
Migut.D00211 Erythranthe guttata HOM05D005645 ORTHO05D007156 3.9e-119 432.6 320 65.3
THA.LOC109115977 Tarenaya hassleriana HOM05D005645 ORTHO05D007156 4.3e-118 429.1 316 67.1
Sed0022873 Sechium edule HOM05D005645 ORTHO05D007156 5.8e-115 418.7 310 65.8
Carub.0006s3469 Capsella rubella HOM05D005645 ORTHO05D007156 1.3e-114 417.5 311 65.0
SGA_v2.0_scaffold1G00372 Striga asiatica HOM05D005645 ORTHO05D007156 2.9e-114 416.4 315 65.4
AT4G02440 Arabidopsis thaliana HOM05D005645 ORTHO05D007156 6.5e-114 415.2 337 61.4
Sp6g02350 Schrenkiella parvula HOM05D005645 ORTHO05D007156 1.9e-113 413.7 342 62.3
ECA236G0211 Erigeron canadensis HOM05D005645 ORTHO05D007156 5.5e-113 412.1 321 62.6
SGA_v2.0_scaffold2G01399 Striga asiatica HOM05D005645 ORTHO05D007156 3.5e-112 409.5 321 63.9
Aa31LG5G2090 Aethionema arabicum HOM05D005645 ORTHO05D007156 7.9e-112 408.3 336 61.3
Sc09g0004020 Simmondsia chinensis HOM05D005645 ORTHO05D007156 7.9e-112 408.3 309 64.4
EL10Ac7g17501 Beta vulgaris HOM05D005645 ORTHO05D007156 5.1e-111 405.6 321 62.9
FAN24G3399 Fragaria x ananassa HOM05D003469 ORTHO05D004084 8.7e-111 404.8 303 63.7
AL6G50630 Arabidopsis lyrata HOM05D005645 ORTHO05D007156 1.1e-110 404.4 330 62.7
FvH4_2g25611 Fragaria vesca HOM05D005645 ORTHO05D007156 3.3e-110 402.9 303 63.4
FAN27G1772 Fragaria x ananassa HOM05D005645 ORTHO05D007156 1.4e-108 397.5 303 63.0
Nitab4.5_0008207g0010 Nicotiana tabacum HOM05D005645 ORTHO05D007156 2.0e-107 393.7 274 71.2
PSO170G2082 Papaver somniferum HOM05D005645 ORTHO05D007156 2.0e-107 393.7 319 62.7
PSO210G7211 Papaver somniferum HOM05D005645 ORTHO05D007156 7.6e-107 391.7 316 62.7
CARHR250710 Cardamine hirsuta HOM05D005645 ORTHO05D007156 8.5e-106 388.3 338 58.9
AUR62008638 Chenopodium quinoa HOM05D005645 ORTHO05D007156 8.5e-106 388.3 342 59.4
AUR62033135 Chenopodium quinoa HOM05D005645 ORTHO05D007156 9.3e-105 384.8 341 57.8
BcaB01g02041 Brassica carinata HOM05D005645 ORTHO05D007156 3.6e-104 382.9 359 57.9
HPP92_025206 Vanilla planifolia HOM05D005645 ORTHO05D007156 3.6e-104 382.9 314 61.1
Nn3g21470 Nelumbo nucifera HOM05D005645 ORTHO05D007156 7.9e-104 381.7 297 64.3
FAN15G1997 Fragaria x ananassa HOM05D005645 ORTHO05D007156 2.8e-101 373.2 287 63.1
Migut.N01502 Erythranthe guttata HOM05D005645 ORTHO05D007156 9.0e-100 368.2 307 59.3
GSVIVG01028000001 Vitis vinifera HOM05D005645 ORTHO05D007156 2.6e-99 366.7 310 60.0
VMungo1383G2661 Vigna mungo HOM05D005645 ORTHO05D007156 4.5e-99 365.9 307 60.3
arahy.Tifrunner.gnm1.ann1.LF73V2 Arachis hypogaea HOM05D005645 ORTHO05D007156 7.7e-99 365.2 316 58.9
Lj1g0011611 Lotus japonicus HOM05D005645 ORTHO05D007156 1.3e-98 364.4 311 58.5
ATR0796G303 Amborella trichopoda HOM05D005645 ORTHO05D007156 1.7e-98 364.0 412 48.8
Phvul.001G207000 Phaseolus vulgaris HOM05D005645 ORTHO05D007156 1.1e-97 361.3 310 59.4
CDE11G0431 Ceratophyllum demersum HOM05D005645 ORTHO05D007156 2.1e-96 357.1 261 66.7
BcaNung04054 Brassica carinata HOM05D005645 ORTHO05D007156 1.0e-95 354.8 380 51.6
C09p01980 Brassica napus HOM05D005645 ORTHO05D007156 8.8e-95 351.7 363 53.7
BraA09t35841Z Brassica rapa HOM05D005645 ORTHO05D007156 8.8e-95 351.7 388 51.3
Oeu011455.1 Olea europaea HOM05D005645 ORTHO05D007156 4.4e-94 349.4 307 56.4
Glyma.03G214300 Glycine max HOM05D005645 ORTHO05D007156 5.7e-94 349.0 312 55.8
BolC9t53130H Brassica oleracea HOM05D005645 ORTHO05D007156 9.7e-94 348.2 380 51.3
A09p01900 Brassica napus HOM05D005645 ORTHO05D007156 6.9e-92 342.0 405 48.4
DCAR_018339 Daucus carota HOM05D005645 ORTHO05D007156 1.8e-87 327.4 308 55.5
Lalb_Chr18g0047021 Lupinus albus HOM05D005645 ORTHO05D007156 1.1e-86 324.7 314 55.1
CAN.G339.1 Capsicum annuum HOM05D005645 ORTHO05D007156 2.0e-86 323.9 248 65.7
Ca_09155_v3 Cicer arietinum L. HOM05D005645 ORTHO05D007156 5.7e-86 322.4 305 53.8
TPR.G9640 Trifolium pratense HOM05D005645 ORTHO05D007156 1.4e-84 317.8 310 52.9
Psat3g022200 Pisum sativum HOM05D005645 ORTHO05D007156 2.0e-83 313.9 312 53.2
Medtr7g108820 Medicago truncatula HOM05D005645 ORTHO05D007156 1.7e-82 310.8 312 52.2
Medtr8g058520 Medicago truncatula HOM05D005645 ORTHO05D007156 1.7e-82 310.8 312 52.2
SHI29059 Sapria himalayana HOM05D005645 ORTHO05D007156 1.6e-75 287.7 302 51.0
Lalb_Chr06g0163461 Lupinus albus HOM05D005645 ORTHO05D007156 3.6e-72 276.6 309 49.2
Zm00001eb346660 Zea mays HOM05D005645 ORTHO05D007156 2.0e-70 270.8 336 44.3
BcaNung05002 Brassica carinata HOM05D005645 ORTHO05D007156 7.5e-70 268.9 260 56.2
Pp3c4_3650 Physcomitrium patens HOM05D005645 ORTHO05D007156 3.7e-69 266.5 352 42.0
Mapoly0034s0045 Marchantia polymorpha HOM05D005645 ORTHO05D007156 5.4e-68 262.7 385 41.8
MELO3C017961.2 Cucumis melo HOM05D005645 ORTHO05D007156 1.2e-67 261.5 154 79.9
Os05g0365000 Oryza sativa ssp. japonica HOM05D005645 ORTHO05D007156 2.0e-67 260.8 310 45.5
AagrBONN_evm.TU.Sc2ySwM_228.5415 Anthoceros agrestis HOM05D005645 ORTHO05D007156 1.3e-66 258.1 405 37.3
SEGI_05916 Sequoiadendron giganteum HOM05D005645 ORTHO05D007156 2.9e-66 256.9 481 34.9
VMungo0720G2164 Vigna mungo HOM05D005645 ORTHO05D007156 5.0e-66 256.1 302 46.0
Glyma.02G018450 Glycine max HOM05D005645 ORTHO05D007156 3.2e-65 253.4 307 46.3
Phvul.007G146000 Phaseolus vulgaris HOM05D005645 ORTHO05D007156 7.2e-65 252.3 305 45.2
Haze_04926 Corylus avellana HOM05D005645 ORTHO05D007156 3.4e-62 243.4 224 59.8
Pp3c12_6520 Physcomitrium patens HOM05D005645 ORTHO05D007156 1.2e-59 235.0 402 35.3
SMO331G0040 Selaginella moellendorffii HOM05D005645 ORTHO05D007156 1.0e-58 231.9 309 41.4
Haze_04922 Corylus avellana HOM05D005645 ORTHO05D007156 1.1e-57 228.4 223 56.5
CDE05G1077 Ceratophyllum demersum HOM05D005645 ORTHO05D007156 3.0e-55 220.3 200 56.5
HPP92_018255 Vanilla planifolia HOM05D005645 ORTHO05D007156 5.7e-54 216.1 302 39.4
arahy.Tifrunner.gnm1.ann1.UILT17 Arachis hypogaea HOM05D005645 ORTHO05D007156 9.8e-54 215.3 312 40.7
arahy.Tifrunner.gnm1.ann1.G1675E Arachis hypogaea HOM05D005645 ORTHO05D007156 2.2e-53 214.2 312 40.4
AagrBONN_evm.TU.Sc2ySwM_117.1647 Anthoceros agrestis HOM05D005645 ORTHO05D007156 2.3e-47 194.1 400 33.2
MD05G1102300 Malus domestica HOM05D005645 ORTHO05D007156 1.3e-45 188.3 98 83.7
unitig_0.g662 Utricularia gibba HOM05D005645 ORTHO05D007156 9.5e-33 145.6 171 46.2
MD05G1102200 Malus domestica HOM05D005645 ORTHO05D007156 6.8e-31 139.4 121 56.2
Oeu046686.1 Olea europaea HOM05D005645 ORTHO05D007156 1.1e-28 132.1 254 34.6
TWI59G0946 Tripterygium wilfordii HOM05D005645 ORTHO05D007156 7.1e-28 129.4 162 44.4
FAN15G0862 Fragaria x ananassa HOM05D005645 ORTHO05D046604 4.8e-08 63.5 57 54.4
FAN07G2129 Fragaria x ananassa HOM05D005645 ORTHO05D046604 1.1e-07 62.4 58 53.4
VMungo1383G0104 Vigna mungo HOM05D002394 ORTHO05D002508 2.4e-07 61.2 87 36.8
Glyma.08G242000 Glycine max HOM05D002394 ORTHO05D002508 6.9e-07 59.7 87 35.6
CiPaw.03G091300 Carya illinoinensis HOM05D002394 ORTHO05D002508 1.2e-06 58.9 87 35.6
Atru.chr8.389 Acer truncatum HOM05D002394 ORTHO05D002508 1.5e-06 58.5 87 35.6
Glyma.18G264200 Glycine max HOM05D002394 ORTHO05D002508 1.5e-06 58.5 87 34.5
Ca_04870_v3 Cicer arietinum L. HOM05D002394 ORTHO05D002508 2.0e-06 58.2 87 34.5
Phvul.008G035700 Phaseolus vulgaris HOM05D002394 ORTHO05D002508 2.0e-06 58.2 87 34.5
CAN.G206.201 Capsicum annuum HOM05D002394 ORTHO05D002508 2.6e-06 57.8 87 34.5
QL02p039501 Quercus lobata HOM05D002394 ORTHO05D002508 2.6e-06 57.8 87 34.5
Solyc02g088590.4 Solanum lycopersicum HOM05D002394 ORTHO05D002508 2.6e-06 57.8 87 34.5
Sopen02g033320 Solanum pennellii HOM05D002394 ORTHO05D002508 2.6e-06 57.8 87 34.5
CiPaw.04G058200 Carya illinoinensis HOM05D002394 ORTHO05D002508 3.4e-06 57.4 87 34.5
PSO017G0834 Papaver somniferum HOM05D002394 ORTHO05D002508 3.4e-06 57.4 87 36.8
PSO478G3218 Papaver somniferum HOM05D002394 ORTHO05D002508 3.4e-06 57.4 87 36.8
Psat1g069520 Pisum sativum HOM05D002394 ORTHO05D002508 3.4e-06 57.4 87 34.5
Manes.01G098800 Manihot esculenta HOM05D002394 ORTHO05D002508 4.5e-06 57.0 87 35.6
Sabra04G0089600 Salix brachista HOM05D002394 ORTHO05D002508 4.5e-06 57.0 87 35.6
TWI32G0249 Tripterygium wilfordii HOM05D002394 ORTHO05D002508 4.5e-06 57.0 96 32.3
Cfa007626 Carpinus fangiana HOM05D002394 ORTHO05D002508 5.8e-06 56.6 87 34.5
TAR629G0704 Trochodendron aralioides HOM05D002394 ORTHO05D002508 5.8e-06 56.6 87 35.6
CARHR197880 Cardamine hirsuta HOM05D002394 ORTHO05D002508 7.6e-06 56.2 88 35.2
Haze_14470 Corylus avellana HOM05D002394 ORTHO05D002508 7.6e-06 56.2 87 34.5
Lj2g0005081 Lotus japonicus HOM05D002394 ORTHO05D002508 7.6e-06 56.2 87 35.6
Potri.004G125000 Populus trichocarpa HOM05D002394 ORTHO05D002508 7.6e-06 56.2 87 34.5
TPR.G26203 Trifolium pratense HOM05D002394 ORTHO05D002508 7.6e-06 56.2 87 33.3
Duzib264G0540 Durio zibethinus HOM05D002394 ORTHO05D002508 9.9e-06 55.8 87 35.6
FAN05G1901 Fragaria x ananassa HOM05D002394 ORTHO05D002508 9.9e-06 55.8 87 33.3
FAN09G2709 Fragaria x ananassa HOM05D002394 ORTHO05D002508 9.9e-06 55.8 87 34.5
Gohir.A05G370466 Gossypium hirsutum HOM05D002394 ORTHO05D002508 9.9e-06 55.8 81 37.0
Gohir.A05G370600 Gossypium hirsutum HOM05D002394 ORTHO05D002508 9.9e-06 55.8 81 37.0
Gohir.D04G045000 Gossypium hirsutum HOM05D002394 ORTHO05D002508 9.9e-06 55.8 81 37.0
Gorai.012G050200 Gossypium raimondii HOM05D002394 ORTHO05D002508 9.9e-06 55.8 81 37.0
Potri.017G090300 Populus trichocarpa HOM05D002394 ORTHO05D002508 9.9e-06 55.8 87 34.5


User provided reference genes

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