Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33046 Davidia involucrata HOM05D006871 ORTHO05D008544 1.7e-105 386.0 192 100.0
CSS0020652 Camellia sinensis var. sinensis HOM05D006871 ORTHO05D008544 9.6e-88 327.0 189 84.1
CSS0035923 Camellia sinensis var. sinensis HOM05D006871 ORTHO05D008544 2.8e-87 325.5 189 83.6
Hma1.2p1_0491F.1_g164460 Hydrangea macrophylla HOM05D006871 ORTHO05D008544 2.0e-85 319.3 191 84.8
vmacro02459 Vaccinium macrocarpon HOM05D006871 ORTHO05D008544 3.4e-85 318.5 190 81.1
Duzib133G1442 Durio zibethinus HOM05D006871 ORTHO05D008544 3.8e-84 315.1 194 79.9
Duzib138G1907 Durio zibethinus HOM05D006871 ORTHO05D008544 8.4e-84 313.9 194 79.4
Atru.chr5.1162 Acer truncatum HOM05D006871 ORTHO05D008544 5.4e-83 311.2 192 80.2
Gohir.D08G084900 Gossypium hirsutum HOM05D006871 ORTHO05D008544 7.1e-83 310.8 192 79.7
Thecc.01G298700 Theobroma cacao HOM05D006871 ORTHO05D008544 1.2e-82 310.1 194 78.9
Cfa005931 Carpinus fangiana HOM05D006871 ORTHO05D008544 2.7e-82 308.9 196 78.1
Haze_04913 Corylus avellana HOM05D006871 ORTHO05D008544 4.6e-82 308.1 198 77.3
Gohir.A08G101400 Gossypium hirsutum HOM05D006871 ORTHO05D008544 4.6e-82 308.1 194 78.4
Actinidia24342 Actinidia chinensis HOM05D006871 ORTHO05D008544 6.0e-82 307.8 189 80.4
Lsat_1_v5_gn_8_53460 Lactuca sativa HOM05D006871 ORTHO05D008544 6.0e-82 307.8 189 80.4
Rhsim13G0011300 Rhododendron simsii HOM05D000121 ORTHO05D000102 1.8e-81 306.2 188 80.9
COL.COLO4_23360 Corchorus olitorius HOM05D006871 ORTHO05D008544 3.9e-81 305.1 185 80.5
HanXRQChr06g0163831 Helianthus annuus HOM05D006871 ORTHO05D008544 1.5e-80 303.1 190 78.9
SalBow3G3208 Salvia bowleyana HOM05D006871 ORTHO05D008544 4.3e-80 301.6 191 78.0
TAR633G1007 Trochodendron aralioides HOM05D006871 ORTHO05D008544 9.6e-80 300.4 196 79.6
Actinidia32224 Actinidia chinensis HOM05D006871 ORTHO05D008544 2.8e-79 298.9 190 77.9
Manes.05G063100 Manihot esculenta HOM05D006871 ORTHO05D008544 3.7e-79 298.5 190 75.3
PGR119G1195 Punica granatum HOM05D006871 ORTHO05D008544 1.1e-78 297.0 199 74.9
PGR119G1688 Punica granatum HOM05D006871 ORTHO05D008544 1.1e-78 297.0 199 74.9
Cpa.g.sc9.224 Carica papaya HOM05D000121 ORTHO05D000102 3.1e-78 295.4 198 71.2
MSTRG.18162 Avicennia marina HOM05D006871 ORTHO05D008544 4.0e-78 295.0 189 77.2
CiPaw.07G107300 Carya illinoinensis HOM05D006871 ORTHO05D008544 9.0e-78 293.9 193 76.7
Ciclev10022428m.g Citrus clementina HOM05D006871 ORTHO05D008544 9.0e-78 293.9 192 77.6
Gorai.004G089300 Gossypium raimondii HOM05D006871 ORTHO05D008544 9.0e-78 293.9 225 68.0
GSVIVG01027991001 Vitis vinifera HOM05D006871 ORTHO05D008544 2.6e-77 292.4 198 73.2
Lj2A1192T47 Lonicera japonica HOM05D006871 ORTHO05D008544 4.5e-77 291.6 193 77.7
TWI14G0013 Tripterygium wilfordii HOM05D006871 ORTHO05D008544 5.8e-77 291.2 192 77.1
Oeu032105.1 Olea europaea HOM05D006871 ORTHO05D008544 2.9e-76 288.9 193 75.6
Potri.014G130400 Populus trichocarpa HOM05D006871 ORTHO05D008544 6.4e-76 287.7 190 75.8
Sc05g0003970 Simmondsia chinensis HOM05D006871 ORTHO05D008544 8.4e-76 287.3 193 75.1
Migut.D00207 Erythranthe guttata HOM05D006871 ORTHO05D008544 4.2e-75 285.0 191 73.3
PGSC0003DMG400011375 Solanum tuberosum HOM05D006871 ORTHO05D008544 4.2e-75 285.0 199 73.9
SGA_v2.0_scaffold1G00373 Striga asiatica HOM05D001198 ORTHO05D008544 1.2e-74 283.5 189 73.0
Solyc09g075030.3 Solanum lycopersicum HOM05D006871 ORTHO05D008544 1.6e-74 283.1 200 73.5
Nitab4.5_0002469g0070 Nicotiana tabacum HOM05D006871 ORTHO05D008544 2.1e-74 282.7 196 73.0
Nitab4.5_0011307g0010 Nicotiana tabacum HOM05D006871 ORTHO05D008544 4.6e-74 281.6 193 72.0
Prupe.8G259900 Prunus persica HOM05D006871 ORTHO05D008544 6.0e-74 281.2 192 74.0
Peaxi162Scf00001g00482 Petunia axillaris HOM05D006871 ORTHO05D008544 1.8e-73 279.6 196 73.0
AUR62033118 Chenopodium quinoa HOM05D006871 ORTHO05D008544 2.3e-73 279.3 192 74.0
Sabra14G0097000 Salix brachista HOM05D006871 ORTHO05D008544 2.3e-73 279.3 190 73.7
THA.LOC104801274 Tarenaya hassleriana HOM05D006871 ORTHO05D008544 3.0e-73 278.9 193 70.5
EL10Ac7g17459 Beta vulgaris HOM05D006871 ORTHO05D008544 5.1e-73 278.1 194 70.6
Lalb_Chr18g0047051 Lupinus albus HOM05D006871 ORTHO05D008544 5.1e-73 278.1 193 72.5
Cc09_g05510 Coffea canephora HOM05D006871 ORTHO05D008544 6.7e-73 277.7 188 73.9
Sopen09g029850 Solanum pennellii HOM05D006871 ORTHO05D008544 1.1e-72 276.9 200 72.0
Eucgr.H01153 Eucalyptus grandis HOM05D006871 ORTHO05D008544 5.6e-72 274.6 204 69.6
MELO3C016009.2 Cucumis melo HOM05D006871 ORTHO05D008544 9.6e-72 273.9 192 72.4
Hund18131 Selenicereus undatus HOM05D006871 ORTHO05D008544 9.6e-72 273.9 232 61.2
CANSAT25G1157 Cannabis sativa HOM05D006871 ORTHO05D008544 1.6e-71 273.1 196 69.9
CANSAT25G3267 Cannabis sativa HOM05D006871 ORTHO05D008544 1.6e-71 273.1 196 69.9
THA.LOC104815930 Tarenaya hassleriana HOM05D006871 ORTHO05D008544 2.1e-71 272.7 195 69.2
BcaC05g24587 Brassica carinata HOM05D006871 ORTHO05D008544 2.8e-71 272.3 192 68.8
C05p01490 Brassica napus HOM05D006871 ORTHO05D008544 2.8e-71 272.3 192 68.8
ECA236G5112 Erigeron canadensis HOM05D006871 ORTHO05D008544 6.2e-71 271.2 190 71.6
Thhalv10008837m.g Eutrema salsugineum HOM05D006871 ORTHO05D008544 6.2e-71 271.2 195 67.2
MD11G1313700 Malus domestica HOM05D006871 ORTHO05D008544 6.2e-71 271.2 193 69.9
BolC5t28931H Brassica oleracea HOM05D006871 ORTHO05D008544 8.2e-71 270.8 192 68.2
BraA10t42428Z Brassica rapa HOM05D006871 ORTHO05D008544 1.1e-70 270.4 192 67.2
ClCG09G005940 Citrullus lanatus HOM05D006871 ORTHO05D008544 3.1e-70 268.9 194 69.6
A10p01520 Brassica napus HOM05D006871 ORTHO05D008544 4.0e-70 268.5 192 66.7
PSO210G5360 Papaver somniferum HOM05D006871 ORTHO05D008544 4.0e-70 268.5 191 70.7
PSO832G2873 Papaver somniferum HOM05D006871 ORTHO05D008544 4.0e-70 268.5 191 70.7
CsaV3_7G029180 Cucumis sativus L. HOM05D006871 ORTHO05D008544 5.3e-70 268.1 192 70.8
unitig_0.g659 Utricularia gibba HOM05D006871 ORTHO05D008544 5.3e-70 268.1 191 68.1
Sed0022553 Sechium edule HOM05D006871 ORTHO05D008544 1.5e-69 266.5 193 69.4
BcaB03g15758 Brassica carinata HOM05D006871 ORTHO05D008544 2.0e-69 266.2 196 67.3
QL12p027406 Quercus lobata HOM05D006871 ORTHO05D008544 2.0e-69 266.2 182 73.6
AT1G02870 Arabidopsis thaliana HOM05D006871 ORTHO05D008544 2.6e-69 265.8 193 65.8
Sp1g01860 Schrenkiella parvula HOM05D006871 ORTHO05D008544 7.6e-69 264.2 192 66.7
CAN.G339.16 Capsicum annuum HOM05D006871 ORTHO05D008544 1.3e-68 263.5 188 73.9
Aa31LG1G9720 Aethionema arabicum HOM05D006871 ORTHO05D008544 1.7e-68 263.1 195 65.1
AL1G12280 Arabidopsis lyrata HOM05D006871 ORTHO05D008544 2.2e-68 262.7 192 66.1
CiPaw.08G096300 Carya illinoinensis HOM05D006871 ORTHO05D008544 2.2e-68 262.7 193 69.4
CARHR002210 Cardamine hirsuta HOM05D006871 ORTHO05D008544 2.9e-68 262.3 192 65.6
RcHm_v2.0_Chr6g0293791 Rosa chinensis HOM05D006871 ORTHO05D008544 3.8e-68 261.9 193 68.9
Aqoxy5G00741 Aquilegia oxysepala HOM05D006871 ORTHO05D008544 4.9e-68 261.5 190 69.5
arahy.Tifrunner.gnm1.ann1.KXN2DA Arachis hypogaea HOM05D006871 ORTHO05D008544 6.5e-68 261.2 190 68.9
arahy.Tifrunner.gnm1.ann1.K3SJ5I Arachis hypogaea HOM05D006871 ORTHO05D008544 1.1e-67 260.4 192 67.7
CDE05G0468 Ceratophyllum demersum HOM05D006871 ORTHO05D008544 5.5e-67 258.1 188 70.7
Carub.0001s0199 Capsella rubella HOM05D006871 ORTHO05D008544 1.6e-66 256.5 192 65.6
ATR0796G034 Amborella trichopoda HOM05D006871 ORTHO05D008544 5.1e-65 251.5 192 67.7
C08p00260 Brassica napus HOM05D006871 ORTHO05D008544 4.3e-64 248.4 194 64.4
BolC8t46828H Brassica oleracea HOM05D006871 ORTHO05D008544 9.7e-64 247.3 194 63.9
Nn3g21461 Nelumbo nucifera HOM05D006871 ORTHO05D008544 6.9e-62 241.1 153 81.0
AUR62008650 Chenopodium quinoa HOM05D006871 ORTHO05D008544 9.0e-62 240.7 275 50.9
Lj1g0003126 Lotus japonicus HOM05D006871 ORTHO05D008544 5.9e-61 238.0 194 65.5
VMungo0720G2524 Vigna mungo HOM05D006871 ORTHO05D008544 7.6e-61 237.7 193 66.8
FvH4_2g25580 Fragaria vesca HOM05D006871 ORTHO05D008544 1.0e-60 237.3 193 64.2
FAN27G2794 Fragaria x ananassa HOM05D006871 ORTHO05D008544 1.3e-60 236.9 193 64.2
FAN20G2591 Fragaria x ananassa HOM05D006871 ORTHO05D008544 2.2e-60 236.1 193 64.2
Glyma.02G155400 Glycine max HOM05D006871 ORTHO05D008544 7.2e-59 231.1 193 63.2
Medtr1g088670 Medicago truncatula HOM05D006871 ORTHO05D008544 7.2e-59 231.1 192 64.1
Phvul.007G143800 Phaseolus vulgaris HOM05D006871 ORTHO05D008544 9.4e-59 230.7 193 64.2
Glyma.10G018900 Glycine max HOM05D006871 ORTHO05D008544 2.7e-58 229.2 192 61.5
Ca_10345_v3 Cicer arietinum L. HOM05D006871 ORTHO05D008544 2.3e-57 226.1 191 63.9
HPP92_013720 Vanilla planifolia HOM05D006871 ORTHO05D008544 2.5e-56 222.6 188 63.3
Psat6g165000 Pisum sativum HOM05D006871 ORTHO05D008544 3.3e-56 222.2 189 63.5
Zm00001eb285510 Zea mays HOM05D006871 ORTHO05D008544 6.3e-55 218.0 181 61.3
FAN24G1547 Fragaria x ananassa HOM05D006871 ORTHO05D008544 5.9e-53 211.5 187 61.0
Os05g0367100 Oryza sativa ssp. japonica HOM05D006871 ORTHO05D008544 5.9e-53 211.5 185 57.8
BcaC07g36990 Brassica carinata HOM05D006871 ORTHO05D008544 1.2e-45 187.2 148 62.2
MBI19_g13201_MAGBIO Magnolia biondii HOM05D006871 ORTHO05D008544 1.3e-39 167.2 114 74.6
Pp3c25_320 Physcomitrium patens HOM05D006871 ORTHO05D008544 2.6e-37 159.5 182 49.5
AagrBONN_evm.TU.Sc2ySwM_117.3922 Anthoceros agrestis HOM05D006871 ORTHO05D008544 3.5e-37 159.1 182 47.8
DCAR_002824 Daucus carota HOM05D006871 ORTHO05D008544 7.2e-35 151.4 112 67.9
CDE11G0846 Ceratophyllum demersum HOM05D006871 ORTHO05D008544 6.3e-31 138.3 112 66.1
Mapoly0043s0113 Marchantia polymorpha HOM05D006871 ORTHO05D008544 7.2e-27 124.8 182 42.3
Psat1g156280 Pisum sativum HOM05D006871 ORTHO05D008544 2.7e-21 106.3 118 54.2
MD05G1198200 Malus domestica HOM05D006871 ORTHO05D008544 6.1e-18 95.1 54 77.8
Cre17.g726650 Chlamydomonas reinhardtii HOM05D006871 ORTHO05D008544 1.4e-14 84.0 188 33.0
Nitab4.5_0000119g0320 Nicotiana tabacum HOM05D006871 ORTHO05D008544 3.1e-14 82.8 49 77.6
CBR_g19096 Chara braunii HOM05D006871 ORTHO05D008544 5.0e-12 75.5 77 50.6
RcHm_v2.0_Chr2g0134071 Rosa chinensis HOM05D006871 ORTHO05D008544 9.5e-11 71.2 61 62.3
MCO15G582 Micromonas commoda HOM05D006871 ORTHO05D008544 1.0e-09 67.8 205 28.8
MD03G1286500 Malus domestica HOM05D006871 ORTHO05D008544 1.4e-09 67.4 35 82.9


User provided reference genes

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