Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33025 Davidia involucrata HOM05D007164 ORTHO05D008802 2.7e-242 841.6 441 100.0
Actinidia24839 Actinidia chinensis HOM05D007164 ORTHO05D008802 4.0e-113 412.5 462 51.5
QL12p030187 Quercus lobata HOM05D007164 ORTHO05D008802 3.5e-93 346.3 445 47.6
Potri.002G208058 Populus trichocarpa HOM05D007164 ORTHO05D008802 1.8e-89 334.0 442 44.8
Lj2A1189G41 Lonicera japonica HOM05D007164 ORTHO05D008802 1.3e-87 327.8 377 49.3
Duzib138G1086 Durio zibethinus HOM05D007164 ORTHO05D008802 4.6e-85 319.3 437 43.0
Manes.01G216000 Manihot esculenta HOM05D007164 ORTHO05D008802 2.3e-84 317.0 447 43.2
Rhsim01G0283000 Rhododendron simsii HOM05D007164 ORTHO05D008802 7.3e-83 312.0 444 45.3
Sabra02G0151300 Salix brachista HOM05D007164 ORTHO05D008802 1.7e-79 300.8 456 41.2
GSVIVG01010946001 Vitis vinifera HOM05D007164 ORTHO05D008802 2.9e-79 300.1 281 55.2
Gorai.004G088600 Gossypium raimondii HOM05D007164 ORTHO05D008802 1.6e-77 294.3 438 41.3
Haze_04871 Corylus avellana HOM05D007164 ORTHO05D008802 2.7e-77 293.5 529 37.1
Thecc.01G295000 Theobroma cacao HOM05D007164 ORTHO05D008802 1.7e-76 290.8 436 40.1
Sabra02G0151900 Salix brachista HOM05D007164 ORTHO05D008802 1.5e-75 287.7 456 40.1
TAR636G2054 Trochodendron aralioides HOM05D007164 ORTHO05D008802 2.6e-72 276.9 447 40.0
vmacro14990 Vaccinium macrocarpon HOM05D007164 ORTHO05D008802 8.4e-71 271.9 439 41.0
COL.COLO4_23399 Corchorus olitorius HOM05D007164 ORTHO05D008802 1.3e-68 264.6 422 39.1
Oeu047456.1 Olea europaea HOM05D007164 ORTHO05D008802 6.7e-68 262.3 414 39.6
Gohir.D08G084100 Gossypium hirsutum HOM05D007164 ORTHO05D008802 9.0e-65 251.9 439 38.5
TWI23G0507 Tripterygium wilfordii HOM05D007164 ORTHO05D008802 4.5e-64 249.6 452 38.1
HanXRQChr10g0283971 Helianthus annuus HOM05D007164 ORTHO05D008802 2.2e-63 247.3 454 37.7
MD03G1283300 Malus domestica HOM05D007164 ORTHO05D008802 2.2e-63 247.3 422 37.9
CANSAT25G0358 Cannabis sativa HOM05D007164 ORTHO05D008802 1.1e-62 245.0 448 38.6
CSS0046769 Camellia sinensis var. sinensis HOM05D007164 ORTHO05D008802 9.3e-62 241.9 346 44.5
Nitab4.5_0005474g0060 Nicotiana tabacum HOM05D000498 ORTHO05D000354 4.6e-61 239.6 489 36.6
Prupe.8G256400 Prunus persica HOM05D007164 ORTHO05D008802 6.0e-61 239.2 307 47.2
ECA247G0548 Erigeron canadensis HOM05D002562 ORTHO05D002808 2.3e-60 237.3 442 37.8
Nitab4.5_0009457g0020 Nicotiana tabacum HOM05D007164 ORTHO05D008802 5.7e-59 232.6 484 36.4
Gohir.A08G075000 Gossypium hirsutum HOM05D007164 ORTHO05D008802 8.2e-58 228.8 297 44.1
RcHm_v2.0_Chr6g0293271 Rosa chinensis HOM05D007164 ORTHO05D008802 5.3e-57 226.1 448 35.9
FvH4_2g25160 Fragaria vesca HOM05D007164 ORTHO05D008802 6.5e-55 219.2 454 34.4
FAN20G2954 Fragaria x ananassa HOM05D007164 ORTHO05D008802 1.4e-54 218.0 444 34.7
Oeu047459.1 Olea europaea HOM05D007164 ORTHO05D008802 1.9e-54 217.6 438 35.8
Solyc09g074840.4 Solanum lycopersicum HOM05D007164 ORTHO05D008802 1.9e-54 217.6 470 35.1
DCAR_005809 Daucus carota HOM05D007164 ORTHO05D008802 4.2e-54 216.5 391 39.9
Ciclev10017702m.g Citrus clementina HOM05D007164 ORTHO05D008802 9.3e-54 215.3 280 48.2
Cc11_g02370 Coffea canephora HOM05D007164 ORTHO05D008802 1.2e-53 214.9 454 37.4
Sopen09g029680 Solanum pennellii HOM05D007164 ORTHO05D008802 6.1e-53 212.6 468 35.0
Migut.D00187 Erythranthe guttata HOM05D007164 ORTHO05D008802 1.0e-52 211.8 384 37.5
FAN24G2541 Fragaria x ananassa HOM05D007164 ORTHO05D008802 1.0e-52 211.8 452 34.5
Peaxi162Scf00067g02422 Petunia axillaris HOM05D007164 ORTHO05D008802 8.7e-52 208.8 431 34.6
Atru.chr5.1222 Acer truncatum HOM05D007164 ORTHO05D008802 1.9e-51 207.6 270 45.6
Cpa.g.sc9.198 Carica papaya HOM05D007164 ORTHO05D008802 9.0e-49 198.7 447 34.0
MBI16_g23765_MAGBIO Magnolia biondii HOM05D007164 ORTHO05D008802 4.2e-46 189.9 309 39.2
Eucgr.K03454 Eucalyptus grandis HOM05D007164 ORTHO05D008802 1.6e-45 188.0 446 32.5
Aqoxy2G03039 Aquilegia oxysepala HOM05D007164 ORTHO05D008802 3.6e-45 186.8 307 39.4
AUR62033184 Chenopodium quinoa HOM05D007164 ORTHO05D008802 3.6e-45 186.8 448 34.2
PGSC0003DMG401011367 Solanum tuberosum HOM05D007164 ORTHO05D008802 3.6e-45 186.8 425 33.6
THA.LOC104825977 Tarenaya hassleriana HOM05D007164 ORTHO05D008802 6.1e-45 186.0 451 32.6
Sc17g0003330 Simmondsia chinensis HOM05D007164 ORTHO05D008802 1.0e-44 185.3 438 34.5
CiPaw.07G104500 Carya illinoinensis HOM05D007164 ORTHO05D008802 2.5e-43 180.6 169 53.8
SGA_v2.0_scaffold2G01414 Striga asiatica HOM05D007164 ORTHO05D008802 1.7e-42 177.9 361 34.1
SalBow3G2762 Salvia bowleyana HOM05D007164 ORTHO05D008802 1.4e-41 174.9 447 33.6
Thhalv10007546m.g Eutrema salsugineum HOM05D007164 ORTHO05D008802 1.7e-39 167.9 465 32.9
FAN27G1449 Fragaria x ananassa HOM05D007164 ORTHO05D008802 2.2e-39 167.5 284 37.7
AUR62008594 Chenopodium quinoa HOM05D007164 ORTHO05D008802 4.2e-38 163.3 464 31.9
AL1G12400 Arabidopsis lyrata HOM05D007164 ORTHO05D008802 5.5e-38 162.9 450 31.3
Sp1g01950 Schrenkiella parvula HOM05D007164 ORTHO05D008802 9.4e-38 162.2 443 30.7
MSTRG.21615 Avicennia marina HOM05D007164 ORTHO05D008802 1.2e-37 161.8 384 32.0
Carub.0001s0209 Capsella rubella HOM05D007164 ORTHO05D008802 4.7e-37 159.8 461 31.5
ClCG05G010410 Citrullus lanatus HOM05D007164 ORTHO05D008802 1.0e-36 158.7 301 35.9
Hund18121 Selenicereus undatus HOM05D007164 ORTHO05D008802 1.0e-36 158.7 308 33.8
A08p37510 Brassica napus HOM05D007164 ORTHO05D008802 2.8e-34 150.6 454 29.5
Ah.15g093880 Amaranthus hybridus HOM05D007164 ORTHO05D008802 4.8e-34 149.8 375 32.0
BraA08t35648Z Brassica rapa HOM05D007164 ORTHO05D008802 1.4e-33 148.3 448 29.7
BolC8t46836H Brassica oleracea HOM05D007164 ORTHO05D008802 1.3e-31 141.7 293 33.4
C08p00350 Brassica napus HOM05D007164 ORTHO05D008802 5.0e-31 139.8 293 33.1
arahy.Tifrunner.gnm1.ann1.JK4YNR Arachis hypogaea HOM05D007164 ORTHO05D008802 3.2e-30 137.1 465 30.1
AT1G02960 Arabidopsis thaliana HOM05D007164 ORTHO05D008802 5.5e-30 136.3 425 29.4
BcaB03g13496 Brassica carinata HOM05D007164 ORTHO05D008802 2.1e-29 134.4 446 28.9
TPR.G27420 Trifolium pratense HOM05D007164 ORTHO05D008802 3.6e-29 133.7 293 34.1
arahy.Tifrunner.gnm1.ann1.PB1NMW Arachis hypogaea HOM05D007164 ORTHO05D008802 1.0e-28 132.1 307 32.6
BcaC07g36981 Brassica carinata HOM05D007164 ORTHO05D008802 2.3e-28 131.0 430 28.6
Sed0021441 Sechium edule HOM05D007164 ORTHO05D008802 8.8e-28 129.0 303 34.3
ATR0053G018 Amborella trichopoda HOM05D007164 ORTHO05D008802 1.1e-27 128.6 301 31.2
CsaV3_3G018070 Cucumis sativus L. HOM05D007164 ORTHO05D008802 1.5e-27 128.3 258 36.0
Medtr3g082270 Medicago truncatula HOM05D007164 ORTHO05D008802 1.5e-27 128.3 290 35.2
Psat5g105520 Pisum sativum HOM05D007164 ORTHO05D008802 1.7e-26 124.8 430 29.5
arahy.Tifrunner.gnm1.ann1.94G738 Arachis hypogaea HOM05D007164 ORTHO05D008802 4.1e-25 120.2 299 34.4
Lj6g0003922 Lotus japonicus HOM05D007164 ORTHO05D008802 1.2e-24 118.6 287 32.8
EL10Ac7g17490 Beta vulgaris HOM05D007164 ORTHO05D008802 2.5e-22 110.9 346 30.1
Duzib138G1663 Durio zibethinus HOM05D007164 ORTHO05D008802 2.5e-22 110.9 184 36.4
MELO3C019559.2 Cucumis melo HOM05D007164 ORTHO05D008802 2.3e-20 104.4 258 32.6
Phvul.007G122524 Phaseolus vulgaris HOM05D007164 ORTHO05D008802 3.0e-20 104.0 295 30.2
Glyma.13G007800 Glycine max HOM05D007164 ORTHO05D008802 5.2e-20 103.2 447 26.8
Lalb_Chr18g0047211 Lupinus albus HOM05D007164 ORTHO05D008802 1.2e-19 102.1 223 35.0
CARHR002290 Cardamine hirsuta HOM05D007164 ORTHO05D008802 3.1e-17 94.0 151 38.4
Zm00001eb252420 Zea mays HOM05D007164 ORTHO05D008802 1.6e-16 91.7 214 33.6
PGR044G2559 Punica granatum HOM05D007164 ORTHO05D008802 2.9e-15 87.4 156 36.5
Aa31LG1G9610 Aethionema arabicum HOM05D007164 ORTHO05D008802 6.5e-15 86.3 444 24.5
Lsat_1_v5_gn_9_3101 Lactuca sativa HOM05D007164 ORTHO05D008802 1.5e-14 85.1 170 38.2
CiPaw.07G104400 Carya illinoinensis HOM05D007164 ORTHO05D008802 7.2e-14 82.8 188 32.4
unitig_0.g652 Utricularia gibba HOM05D007164 ORTHO05D008802 1.4e-12 78.6 100 39.0
VMungo0540G1256 Vigna mungo HOM05D007164 ORTHO05D008802 5.2e-12 76.6 109 39.4
PGR044G2041 Punica granatum HOM05D007164 ORTHO05D008802 6.8e-12 76.3 136 35.3
HPP92_027362 Vanilla planifolia HOM05D007164 ORTHO05D008802 2.2e-10 71.2 152 33.6
GSVIVG01010947001 Vitis vinifera HOM05D007164 ORTHO05D008802 5.9e-08 63.2 50 66.0
BcaB06g26239 Brassica carinata HOM05D007164 ORTHO05D008802 7.7e-08 62.8 94 43.6
Zm00001eb133720 Zea mays HOM05D000144 ORTHO05D008802 1.7e-07 61.6 93 37.6


User provided reference genes

Program Settings