Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33000 Davidia involucrata HOM05D006618 ORTHO05D008291 1.5e-72 276.6 190 100.0
Hma1.2p1_0399F.1_g144140 Hydrangea macrophylla HOM05D006618 ORTHO05D008291 3.2e-51 205.7 198 64.1
CSS0038517 Camellia sinensis var. sinensis HOM05D006618 ORTHO05D008291 2.2e-44 183.0 184 61.4
Hund18083 Selenicereus undatus HOM05D006618 ORTHO05D008291 4.9e-44 181.8 189 59.8
MSTRG.18188 Avicennia marina HOM05D006618 ORTHO05D008291 6.4e-44 181.4 185 60.0
Nitab4.5_0012299g0010 Nicotiana tabacum HOM05D006618 ORTHO05D008291 1.9e-43 179.9 181 70.7
CiPaw.08G099900 Carya illinoinensis HOM05D006618 ORTHO05D008291 5.5e-43 178.3 192 57.8
Peaxi162Scf01039g00026 Petunia axillaris HOM05D006618 ORTHO05D008291 6.0e-42 174.9 187 57.2
Phvul.001G202800 Phaseolus vulgaris HOM05D006618 ORTHO05D008291 8.7e-41 171.0 180 57.2
Nitab4.5_0002093g0230 Nicotiana tabacum HOM05D006618 ORTHO05D008291 1.5e-40 170.2 181 72.4
Sc17g0003540 Simmondsia chinensis HOM05D006618 ORTHO05D008291 2.1e-39 166.4 179 57.5
Solyc06g084500.3 Solanum lycopersicum HOM05D006618 ORTHO05D008291 3.7e-39 165.6 187 55.6
VMungo1383G0445 Vigna mungo HOM05D006618 ORTHO05D008291 6.2e-39 164.9 180 56.1
Potri.014G134700 Populus trichocarpa HOM05D006618 ORTHO05D008291 1.1e-38 164.1 193 58.0
PGSC0003DMG400024043 Solanum tuberosum HOM05D006618 ORTHO05D008291 4.0e-38 162.2 183 56.3
Manes.05G067500 Manihot esculenta HOM05D006618 ORTHO05D008291 1.2e-37 160.6 187 55.1
Aqoxy5G00606 Aquilegia oxysepala HOM05D006618 ORTHO05D008291 2.0e-37 159.8 180 52.8
Lj1C37G5 Lonicera japonica HOM05D000143 ORTHO05D000072 1.3e-36 157.1 156 70.5
EL10Ac7g17390 Beta vulgaris HOM05D006618 ORTHO05D008291 1.7e-36 156.8 168 56.5
Sopen06g035880 Solanum pennellii HOM05D006618 ORTHO05D008291 1.7e-36 156.8 182 54.9
Glyma.03G209500 Glycine max HOM05D006618 ORTHO05D008291 3.8e-36 155.6 184 51.6
Duzib211G0091 Durio zibethinus HOM05D006618 ORTHO05D008291 4.9e-36 155.2 192 56.2
Glyma.19G206900 Glycine max HOM05D006618 ORTHO05D008291 6.5e-36 154.8 181 54.7
TAR362G0318 Trochodendron aralioides HOM05D006618 ORTHO05D008291 6.5e-36 154.8 180 60.0
vmacro02504 Vaccinium macrocarpon HOM05D006618 ORTHO05D008291 6.5e-36 154.8 241 44.8
Cfa006056 Carpinus fangiana HOM05D006618 ORTHO05D008291 2.5e-35 152.9 181 52.5
Lsat_1_v5_gn_9_4841 Lactuca sativa HOM05D006618 ORTHO05D008291 3.2e-35 152.5 177 53.7
PSO170G6580 Papaver somniferum HOM05D006618 ORTHO05D008291 5.5e-35 151.8 167 55.1
Prupe.8G253400 Prunus persica HOM05D006618 ORTHO05D008291 5.5e-35 151.8 222 55.9
Ah.08g212660 Amaranthus hybridus HOM05D006618 ORTHO05D008291 7.1e-35 151.4 175 54.3
AUR62036645 Chenopodium quinoa HOM05D006618 ORTHO05D008291 7.1e-35 151.4 175 54.9
SalBow3G3170 Salvia bowleyana HOM05D006618 ORTHO05D008291 7.1e-35 151.4 182 51.6
THA.LOC104801197 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 1.2e-34 150.6 189 50.8
Oeu057561.4 Olea europaea HOM05D006618 ORTHO05D008008 2.1e-34 149.8 159 56.6
PSO210G2131 Papaver somniferum HOM05D006618 ORTHO05D008291 2.7e-34 149.4 174 52.9
PGR119G1443 Punica granatum HOM05D006618 ORTHO05D008291 6.0e-34 148.3 180 53.3
Atru.chr5.1237 Acer truncatum HOM05D006618 ORTHO05D008291 7.9e-34 147.9 189 51.9
CAN.G1209.34 Capsicum annuum HOM05D006618 ORTHO05D008291 7.9e-34 147.9 177 52.0
Nn3g21320 Nelumbo nucifera HOM05D006618 ORTHO05D008291 7.9e-34 147.9 186 52.7
Haze_04826 Corylus avellana HOM05D006618 ORTHO05D008291 1.0e-33 147.5 221 45.7
MD11G1299100 Malus domestica HOM05D006618 ORTHO05D008291 1.8e-33 146.7 228 51.3
QL12p024238 Quercus lobata HOM05D006618 ORTHO05D008291 1.8e-33 146.7 192 49.5
Sed0009421 Sechium edule HOM05D006618 ORTHO05D008291 1.8e-33 146.7 189 51.3
SGA_v2.0_scaffold11G05756 Striga asiatica HOM05D006618 ORTHO05D008291 3.0e-33 146.0 183 51.9
Eucgr.H01207 Eucalyptus grandis HOM05D006618 ORTHO05D008291 3.9e-33 145.6 163 63.8
Sed0008392 Sechium edule HOM05D006618 ORTHO05D008291 5.1e-33 145.2 189 49.7
Haze_04795 Corylus avellana HOM05D006618 ORTHO05D008291 4.3e-32 142.1 222 44.6
Aa31LG5G2680 Aethionema arabicum HOM05D006618 ORTHO05D008291 5.7e-32 141.7 181 49.2
Thhalv10028994m.g Eutrema salsugineum HOM05D006618 ORTHO05D008291 9.6e-32 141.0 180 48.3
MD03G1276600 Malus domestica HOM05D006618 ORTHO05D008291 2.1e-31 139.8 227 49.8
Cc01_g20320 Coffea canephora HOM05D006618 ORTHO05D008291 2.8e-31 139.4 161 54.0
Carub.0006s3388 Capsella rubella HOM05D006618 ORTHO05D008291 3.7e-31 139.0 179 48.0
COL.COLO4_08018 Corchorus olitorius HOM05D006618 ORTHO05D008291 4.8e-31 138.7 192 49.5
Lj1g0015584 Lotus japonicus HOM05D006618 ORTHO05D008291 6.3e-31 138.3 178 45.5
Medtr7g108100 Medicago truncatula HOM05D006618 ORTHO05D008291 1.1e-30 137.5 167 50.3
Gorai.007G131200 Gossypium raimondii HOM05D006618 ORTHO05D008291 1.8e-30 136.7 151 52.3
ClCG09G006430 Citrullus lanatus HOM05D006618 ORTHO05D008291 3.1e-30 136.0 181 48.6
Duzib138G1186 Durio zibethinus HOM05D006618 ORTHO05D008291 9.0e-30 134.4 194 49.0
AT4G03180 Arabidopsis thaliana HOM05D006618 ORTHO05D008291 1.2e-29 134.0 174 50.0
AL6G49760 Arabidopsis lyrata HOM05D006618 ORTHO05D008291 2.0e-29 133.3 182 48.4
RcHm_v2.0_Chr6g0292701 Rosa chinensis HOM05D006618 ORTHO05D008291 3.4e-29 132.5 190 48.9
ECA247G1808 Erigeron canadensis HOM05D006618 ORTHO05D008291 5.9e-29 131.7 189 48.1
Zm00001eb410530 Zea mays HOM05D006618 ORTHO05D008291 7.6e-29 131.3 148 52.7
CARHR251610 Cardamine hirsuta HOM05D006618 ORTHO05D008291 1.0e-28 131.0 189 45.0
Migut.D00152 Erythranthe guttata HOM05D006618 ORTHO05D008291 1.3e-28 130.6 205 46.3
FvH4_2g24850 Fragaria vesca HOM05D006618 ORTHO05D008291 1.3e-28 130.6 190 47.4
FAN24G2031 Fragaria x ananassa HOM05D006618 ORTHO05D008291 1.3e-28 130.6 190 47.4
Thecc.01G291700 Theobroma cacao HOM05D006618 ORTHO05D008291 2.2e-28 129.8 192 55.7
Psat3g024440 Pisum sativum HOM05D006618 ORTHO05D008291 2.9e-28 129.4 166 54.8
BolC3t16012H Brassica oleracea HOM05D006618 ORTHO05D008291 6.5e-28 128.3 179 43.6
AUR62034630 Chenopodium quinoa HOM05D006618 ORTHO05D008291 8.4e-28 127.9 205 44.4
FAN27G1167 Fragaria x ananassa HOM05D006618 ORTHO05D008291 8.4e-28 127.9 184 46.7
Sp6g03210 Schrenkiella parvula HOM05D006618 ORTHO05D008291 1.4e-27 127.1 181 44.8
TWI12G0445 Tripterygium wilfordii HOM05D006618 ORTHO05D008291 1.4e-27 127.1 185 45.4
BcaB05g23692 Brassica carinata HOM05D006618 ORTHO05D008291 1.9e-27 126.7 167 46.1
Sabra14G0100400 Salix brachista HOM05D006618 ORTHO05D008291 1.9e-27 126.7 190 48.9
C03p37140 Brassica napus HOM05D006618 ORTHO05D008291 2.5e-27 126.3 179 43.0
CsaV3_7G028720 Cucumis sativus L. HOM05D006618 ORTHO05D008291 3.2e-27 125.9 186 46.8
Ciclev10022357m.g Citrus clementina HOM05D006618 ORTHO05D008291 4.2e-27 125.6 163 55.8
MELO3C015900.2 Cucumis melo HOM05D006618 ORTHO05D008291 4.2e-27 125.6 202 45.0
FAN15G0256 Fragaria x ananassa HOM05D006618 ORTHO05D008291 5.5e-27 125.2 190 51.1
Os12g0538100 Oryza sativa ssp. japonica HOM05D006618 ORTHO05D008291 7.2e-27 124.8 153 60.1
BcaC01g06702 Brassica carinata HOM05D006618 ORTHO05D008291 9.3e-27 124.4 179 42.5
Zm00001eb137700 Zea mays HOM05D006618 ORTHO05D008291 4.6e-26 122.1 144 49.3
Ca_23188_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 1.8e-25 120.2 164 47.0
TPR.G32314 Trifolium pratense HOM05D006618 ORTHO05D008291 3.9e-25 119.0 185 43.8
HanXRQChr15g0466141 Helianthus annuus HOM05D006618 ORTHO05D008291 1.1e-24 117.5 181 43.6
Lalb_Chr18g0047451 Lupinus albus HOM05D006618 ORTHO05D008291 1.5e-24 117.1 163 47.9
Gohir.A11G117500 Gossypium hirsutum HOM05D006618 ORTHO05D008291 4.3e-24 115.5 186 41.9
ATR0706G074 Amborella trichopoda HOM05D006618 ORTHO05D008291 1.6e-23 113.6 174 46.0
GSVIVG01010994001 Vitis vinifera HOM05D006618 ORTHO05D008291 1.6e-23 113.6 144 54.9
BcaB01g02511 Brassica carinata HOM05D006618 ORTHO05D008291 1.8e-22 110.2 182 40.7
Rhsim13G0016600 Rhododendron simsii HOM05D006618 ORTHO05D008291 4.5e-21 105.5 157 45.9
BcaC03g16213 Brassica carinata HOM05D006618 ORTHO05D008291 2.9e-20 102.8 168 40.5
BolC2t10017H Brassica oleracea HOM05D006618 ORTHO05D008291 2.9e-20 102.8 168 40.5
arahy.Tifrunner.gnm1.ann1.1H6IZY Arachis hypogaea HOM05D006618 ORTHO05D008291 1.4e-19 100.5 146 45.2
A02p25130 Brassica napus HOM05D006618 ORTHO05D008291 3.2e-19 99.4 168 45.2
arahy.Tifrunner.gnm1.ann1.160DKY Arachis hypogaea HOM05D006618 ORTHO05D008291 9.4e-19 97.8 145 44.1
BraA02t07501Z Brassica rapa HOM05D006618 ORTHO05D008291 1.2e-18 97.4 168 44.6
C02p39890 Brassica napus HOM05D006618 ORTHO05D008291 1.6e-18 97.1 179 43.0
Actinidia24851 Actinidia chinensis HOM05D006618 ORTHO05D008291 1.0e-17 94.4 114 55.3
HPP92_017865 Vanilla planifolia HOM05D006618 ORTHO05D008291 1.0e-17 94.4 181 38.7
FAN20G2846 Fragaria x ananassa HOM05D006618 ORTHO05D008291 1.1e-16 90.9 168 42.9
Gohir.D11G122400 Gossypium hirsutum HOM05D006618 ORTHO05D008291 1.5e-16 90.5 127 46.5
MBI19_g13630_MAGBIO Magnolia biondii HOM05D006618 ORTHO05D008291 3.3e-16 89.4 185 37.8
Actinidia21075 Actinidia chinensis HOM05D006618 ORTHO05D008291 9.7e-16 87.8 50 88.0
unitig_22.g5246 Utricularia gibba HOM05D006618 ORTHO05D008291 4.8e-15 85.5 170 38.8
Atru.chr5.1270 Acer truncatum HOM05D006618 ORTHO05D008291 6.3e-15 85.1 88 60.2
SHI15557 Sapria himalayana HOM05D006618 ORTHO05D008291 1.1e-14 84.3 88 61.4
CANSAT25G1401 Cannabis sativa HOM05D006618 ORTHO05D008291 1.4e-14 84.0 191 39.3
Cfa006024 Carpinus fangiana HOM05D006618 ORTHO05D008291 2.0e-13 80.1 66 60.6
Ca_09115_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 2.9e-12 76.3 149 38.3
THA.LOC104827373 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 6.5e-12 75.1 121 48.8
arahy.Tifrunner.gnm1.ann1.915FC2 Arachis hypogaea HOM05D006618 ORTHO05D008291 7.9e-10 68.2 146 41.1
arahy.Tifrunner.gnm1.ann1.MTA467 Arachis hypogaea HOM05D006618 ORTHO05D008291 7.9e-10 68.2 146 40.4
SEGI_31360 Sequoiadendron giganteum HOM05D006618 ORTHO05D008291 2.8e-07 59.7 55 61.8
AagrBONN_evm.TU.Sc2ySwM_117.1999 Anthoceros agrestis HOM05D006618 ORTHO05D008291 1.1e-06 57.8 62 51.6
BcaB05g22921 Brassica carinata HOM05D001082 ORTHO05D008291 7.0e-06 55.1 132 32.6
Mapoly0001s0215 Marchantia polymorpha HOM05D006618 ORTHO05D008291 9.1e-06 54.7 196 32.7


User provided reference genes

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