Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv32933 Davidia involucrata HOM05D000769 ORTHO05D185758 1.4e-34 149.1 73 100.0
Manes.05G076700 Manihot esculenta HOM05D000769 ORTHO05D000598 4.4e-09 64.3 34 91.2
Oeu022157.1 Olea europaea HOM05D000769 ORTHO05D000598 1.3e-08 62.8 38 81.6
MSTRG.21559 Avicennia marina HOM05D000769 ORTHO05D000598 1.7e-08 62.4 38 81.6
Actinidia00753 Actinidia chinensis HOM05D000769 ORTHO05D000598 2.2e-08 62.0 38 81.6
Actinidia09133 Actinidia chinensis HOM05D000769 ORTHO05D000598 2.9e-08 61.6 38 81.6
Dinv34754 Davidia involucrata HOM05D000769 ORTHO05D000598 2.9e-08 61.6 34 85.3
Hma1.2p1_0257F.1_g103390 Hydrangea macrophylla HOM05D000769 ORTHO05D000598 2.9e-08 61.6 38 81.6
MSTRG.12564 Avicennia marina HOM05D000769 ORTHO05D000598 3.7e-08 61.2 38 78.9
Haze_04708 Corylus avellana HOM05D000769 ORTHO05D000598 3.7e-08 61.2 34 85.3
Migut.D00298 Erythranthe guttata HOM05D000769 ORTHO05D000598 3.7e-08 61.2 34 85.3
Lj2C1172T10 Lonicera japonica HOM05D000769 ORTHO05D000598 3.7e-08 61.2 38 78.9
PSO210G3720 Papaver somniferum HOM05D000769 ORTHO05D000598 3.7e-08 61.2 34 85.3
Sed0001169 Sechium edule HOM05D000769 ORTHO05D000598 3.7e-08 61.2 34 85.3
CiPaw.07G091900 Carya illinoinensis HOM05D000769 ORTHO05D000598 4.9e-08 60.8 34 85.3
Duzib211G0375 Durio zibethinus HOM05D000769 ORTHO05D000598 4.9e-08 60.8 34 85.3
FvH4_2g23550 Fragaria vesca HOM05D000769 ORTHO05D000598 4.9e-08 60.8 34 85.3
FAN15G2225 Fragaria x ananassa HOM05D000769 ORTHO05D000598 4.9e-08 60.8 34 85.3
FAN20G1828 Fragaria x ananassa HOM05D000769 ORTHO05D000598 4.9e-08 60.8 34 85.3
FAN24G3090 Fragaria x ananassa HOM05D000769 ORTHO05D000598 4.9e-08 60.8 34 85.3
FAN27G1140 Fragaria x ananassa HOM05D000769 ORTHO05D000598 4.9e-08 60.8 34 85.3
PGR119G0694 Punica granatum HOM05D000769 ORTHO05D000598 4.9e-08 60.8 38 81.6
QL12p021784 Quercus lobata HOM05D000769 ORTHO05D000598 4.9e-08 60.8 34 85.3
RcHm_v2.0_Chr6g0291021 Rosa chinensis HOM05D000769 ORTHO05D000598 4.9e-08 60.8 34 85.3
CSS0035543 Camellia sinensis var. sinensis HOM05D000769 ORTHO05D000598 6.4e-08 60.5 38 76.3
CSS0041021 Camellia sinensis var. sinensis HOM05D000769 ORTHO05D000598 6.4e-08 60.5 38 76.3
DCAR_002732 Daucus carota HOM05D000769 ORTHO05D000598 6.4e-08 60.5 29 96.6
Thecc.01G279100 Theobroma cacao HOM05D000769 ORTHO05D000598 6.4e-08 60.5 34 82.4
TAR362G0134 Trochodendron aralioides HOM05D000769 ORTHO05D000598 6.4e-08 60.5 34 82.4
ClCG09G007060 Citrullus lanatus HOM05D000769 ORTHO05D000598 8.3e-08 60.1 34 82.4
MELO3C015833.2 Cucumis melo HOM05D000769 ORTHO05D000598 8.3e-08 60.1 34 82.4
Ciclev10021982m.g Citrus clementina HOM05D000769 ORTHO05D000598 1.1e-07 59.7 34 82.4
ECA248G1114 Erigeron canadensis HOM05D000769 ORTHO05D000598 1.1e-07 59.7 38 76.3
HanXRQChr01g0003121 Helianthus annuus HOM05D000769 ORTHO05D000598 1.1e-07 59.7 38 76.3
Lsat_1_v5_gn_5_188201 Lactuca sativa HOM05D000769 ORTHO05D000598 1.1e-07 59.7 38 76.3
MD11G1285000 Malus domestica HOM05D000769 ORTHO05D000598 1.1e-07 59.7 34 82.4
Prupe.8G240800 Prunus persica HOM05D000769 ORTHO05D000598 1.1e-07 59.7 34 82.4
TWI59G0505 Tripterygium wilfordii HOM05D000769 ORTHO05D000598 1.1e-07 59.7 36 83.3
CsaV3_7G028110 Cucumis sativus L. HOM05D000769 ORTHO05D000598 1.4e-07 59.3 34 79.4
Potri.005G209800 Populus trichocarpa HOM05D000769 ORTHO05D000598 1.4e-07 59.3 34 79.4
Sabra05G0159800 Salix brachista HOM05D000769 ORTHO05D000598 1.4e-07 59.3 34 79.4
Ah.15g091920 Amaranthus hybridus HOM05D000769 ORTHO05D000598 1.9e-07 58.9 36 72.2
EL10Ac7g17238 Beta vulgaris HOM05D000769 ORTHO05D000598 1.9e-07 58.9 38 71.1
Ca_08583_v3 Cicer arietinum L. HOM05D000769 ORTHO05D000598 1.9e-07 58.9 29 93.1
Glyma.19G156200 Glycine max HOM05D000769 ORTHO05D000598 1.9e-07 58.9 38 73.7
Gohir.A08G066900 Gossypium hirsutum HOM05D000769 ORTHO05D000598 1.9e-07 58.9 29 93.1
Gohir.D08G075500 Gossypium hirsutum HOM05D000769 ORTHO05D000598 1.9e-07 58.9 29 93.1
Gorai.004G079800 Gossypium raimondii HOM05D000769 ORTHO05D000598 1.9e-07 58.9 29 93.1
MD03G1264800 Malus domestica HOM05D000769 ORTHO05D000598 1.9e-07 58.9 29 93.1
Psat3g064240 Pisum sativum HOM05D000769 ORTHO05D000598 1.9e-07 58.9 29 93.1
Aqoxy2G03337 Aquilegia oxysepala HOM05D000769 ORTHO05D000598 2.4e-07 58.5 29 89.7
Eucgr.H01477 Eucalyptus grandis HOM05D000769 ORTHO05D000598 2.4e-07 58.5 33 81.8
CAN.G232.2 Capsicum annuum HOM05D000769 ORTHO05D000598 3.2e-07 58.2 38 73.7
Nitab4.5_0000458g0060 Nicotiana tabacum HOM05D000769 ORTHO05D000598 3.2e-07 58.2 38 73.7
Nitab4.5_0006749g0010 Nicotiana tabacum HOM05D000769 ORTHO05D000598 3.2e-07 58.2 38 73.7
Peaxi162Scf00641g00815 Petunia axillaris HOM05D000769 ORTHO05D000598 3.2e-07 58.2 38 73.7
Sed0002803 Sechium edule HOM05D000769 ORTHO05D000598 3.2e-07 58.2 34 79.4
Solyc09g065200.4 Solanum lycopersicum HOM05D000769 ORTHO05D000598 3.2e-07 58.2 38 73.7
Sopen09g026930 Solanum pennellii HOM05D000769 ORTHO05D000598 3.2e-07 58.2 38 73.7
PGSC0003DMG400012887 Solanum tuberosum HOM05D000769 ORTHO05D000598 3.2e-07 58.2 38 73.7
SGA_v2.0_scaffold138G35340 Striga asiatica HOM05D000769 ORTHO05D000598 3.2e-07 58.2 34 73.5
arahy.Tifrunner.gnm1.ann1.DVHD2P Arachis hypogaea HOM05D000769 ORTHO05D000598 4.1e-07 57.8 29 89.7
arahy.Tifrunner.gnm1.ann1.JX4N9L Arachis hypogaea HOM05D000769 ORTHO05D000598 4.1e-07 57.8 29 89.7
CANSAT25G1716 Cannabis sativa HOM05D000769 ORTHO05D000598 4.1e-07 57.8 29 89.7
COL.COLO4_09093 Corchorus olitorius HOM05D000769 ORTHO05D000598 4.1e-07 57.8 34 76.5
Glyma.03G153800 Glycine max HOM05D000769 ORTHO05D000598 4.1e-07 57.8 29 89.7
Gohir.D11G128000 Gossypium hirsutum HOM05D000769 ORTHO05D000598 4.1e-07 57.8 34 76.5
Gorai.007G136900 Gossypium raimondii HOM05D000769 ORTHO05D000598 4.1e-07 57.8 34 76.5
Lj1g0010934 Lotus japonicus HOM05D000769 ORTHO05D000598 4.1e-07 57.8 29 89.7
Phvul.001G151100 Phaseolus vulgaris HOM05D000769 ORTHO05D000598 4.1e-07 57.8 29 89.7
Sabra02G0042900 Salix brachista HOM05D000769 ORTHO05D000598 4.1e-07 57.8 38 71.1
SalBow6G2825 Salvia bowleyana HOM05D000769 ORTHO05D000598 4.1e-07 57.8 38 71.1
TPR.G9928 Trifolium pratense HOM05D000769 ORTHO05D000598 4.1e-07 57.8 29 89.7
VMungo1383G2868 Vigna mungo HOM05D000769 ORTHO05D000598 4.1e-07 57.8 29 89.7
MSTRG.18235 Avicennia marina HOM05D000769 ORTHO05D000598 5.4e-07 57.4 38 71.1
Cc01_g19450 Coffea canephora HOM05D000769 ORTHO05D000598 5.4e-07 57.4 38 73.7
Duzib138G0490 Durio zibethinus HOM05D000769 ORTHO05D000598 5.4e-07 57.4 34 79.4
Lsat_1_v5_gn_9_3660 Lactuca sativa HOM05D000769 ORTHO05D000598 5.4e-07 57.4 38 71.1
Lalb_Chr01g0020151 Lupinus albus HOM05D000769 ORTHO05D000598 5.4e-07 57.4 29 89.7
TWI14G1123 Tripterygium wilfordii HOM05D000769 ORTHO05D000598 5.4e-07 57.4 29 93.1
ATR0626G111 Amborella trichopoda HOM05D000769 ORTHO05D000598 7.0e-07 57.0 29 89.7
PSO170G0293 Papaver somniferum HOM05D000769 ORTHO05D000598 7.0e-07 57.0 29 86.2
PSO302G0280 Papaver somniferum HOM05D000769 ORTHO05D000598 7.0e-07 57.0 29 86.2
TAR633G1542 Trochodendron aralioides HOM05D000769 ORTHO05D000598 7.0e-07 57.0 34 76.5
AUR62043697 Chenopodium quinoa HOM05D000769 ORTHO05D000598 9.2e-07 56.6 36 72.2
PSO832G3034 Papaver somniferum HOM05D000769 ORTHO05D000598 9.2e-07 56.6 35 82.9
Rhsim13G0025000 Rhododendron simsii HOM05D000769 ORTHO05D000598 9.2e-07 56.6 38 73.7
Potri.002G052800 Populus trichocarpa HOM05D000769 ORTHO05D000598 1.6e-06 55.8 34 73.5
MBI17_g09113_MAGBIO Magnolia biondii HOM05D000769 ORTHO05D000598 2.0e-06 55.5 34 76.5
SMO269G0010 Selaginella moellendorffii HOM05D000769 ORTHO05D000598 2.0e-06 55.5 29 82.8
Actinidia12639 Actinidia chinensis HOM05D000769 ORTHO05D000598 3.5e-06 54.7 29 79.3
Cc02_g25260 Coffea canephora HOM05D000769 ORTHO05D000598 3.5e-06 54.7 29 79.3
FvH4_7g09340 Fragaria vesca HOM05D000769 ORTHO05D000598 3.5e-06 54.7 29 79.3
FAN01G0161 Fragaria x ananassa HOM05D000769 ORTHO05D000598 3.5e-06 54.7 29 79.3
Manes.08G121100 Manihot esculenta HOM05D000769 ORTHO05D000598 3.5e-06 54.7 36 69.4
Medtr7g094880 Medicago truncatula HOM05D000769 ORTHO05D000598 3.5e-06 54.7 29 82.8
RcHm_v2.0_Chr1g0345981 Rosa chinensis HOM05D000769 ORTHO05D000598 3.5e-06 54.7 29 79.3
SGA_v2.0_scaffold81G25997 Striga asiatica HOM05D000769 ORTHO05D000598 3.5e-06 54.7 38 68.4
Atru.chr5.1439 Acer truncatum HOM05D000769 ORTHO05D000598 4.6e-06 54.3 34 76.5
CDE05G0852 Ceratophyllum demersum HOM05D000769 ORTHO05D000598 4.6e-06 54.3 36 69.4
CBR_g46429 Chara braunii HOM05D000769 ORTHO05D000598 4.6e-06 54.3 29 79.3
Mapoly0199s0006 Marchantia polymorpha HOM05D000769 ORTHO05D000598 4.6e-06 54.3 29 79.3
SMO343G0023 Selaginella moellendorffii HOM05D000769 ORTHO05D000598 4.6e-06 54.3 29 79.3
CDE11G0779 Ceratophyllum demersum HOM05D000769 ORTHO05D000598 6.0e-06 53.9 29 75.9
Sc05g0004800 Simmondsia chinensis HOM05D000769 ORTHO05D000598 6.0e-06 53.9 34 73.5
Thecc.05G304300 Theobroma cacao HOM05D000769 ORTHO05D000598 6.0e-06 53.9 36 72.2
Cpa.g.sc370.7 Carica papaya HOM05D000769 ORTHO05D000598 7.8e-06 53.5 29 82.8
ECA247G0892 Erigeron canadensis HOM05D000769 ORTHO05D000598 7.8e-06 53.5 34 67.6
Lalb_Chr01g0021671 Lupinus albus HOM05D000769 ORTHO05D000598 7.8e-06 53.5 74 44.6
Oeu006081.1 Olea europaea HOM05D000769 ORTHO05D000598 7.8e-06 53.5 29 75.9
SGA_v2.0_scaffold1284G53896 Striga asiatica HOM05D000769 ORTHO05D000598 7.8e-06 53.5 29 75.9
TPR.G32135 Trifolium pratense HOM05D000769 ORTHO05D000598 7.8e-06 53.5 74 41.9
vmacro13515 Vaccinium macrocarpon HOM05D000769 ORTHO05D000598 7.8e-06 53.5 29 75.9


User provided reference genes

Program Settings