Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv32860 Davidia involucrata HOM05D006681 ORTHO05D008338 7.1e-141 503.8 239 100.0
CSS0007914 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 1.8e-107 392.9 235 77.9
CSS0025304 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 3.9e-107 391.7 235 77.9
Oeu040277.1 Olea europaea HOM05D006681 ORTHO05D008338 6.3e-105 384.4 225 81.3
GSVIVG01025054001 Vitis vinifera HOM05D006681 ORTHO05D008338 7.0e-104 380.9 220 80.5
TAR633G1649 Trochodendron aralioides HOM05D006681 ORTHO05D008338 9.1e-104 380.6 237 76.8
Cfa011429 Carpinus fangiana HOM05D006681 ORTHO05D008338 1.0e-102 377.1 220 83.2
FvH4_3g34680 Fragaria vesca HOM05D006681 ORTHO05D008338 5.5e-101 371.3 224 79.9
FAN11G3596 Fragaria x ananassa HOM05D006681 ORTHO05D008338 7.2e-101 370.9 224 79.9
Atru.chr3.3798 Acer truncatum HOM05D006681 ORTHO05D008338 9.4e-101 370.5 219 78.5
FAN16G0358 Fragaria x ananassa HOM05D006681 ORTHO05D008338 9.4e-101 370.5 224 79.5
ECA236G1321 Erigeron canadensis HOM05D006681 ORTHO05D008338 6.1e-100 367.9 219 79.0
Thecc.09G329700 Theobroma cacao HOM05D006681 ORTHO05D008338 8.0e-100 367.5 225 77.3
RcHm_v2.0_Chr5g0062361 Rosa chinensis HOM05D006681 ORTHO05D008338 4.0e-99 365.2 218 81.2
QL01p034239 Quercus lobata HOM05D006681 ORTHO05D008338 2.0e-98 362.8 218 78.4
Ciclev10028948m.g Citrus clementina HOM05D006681 ORTHO05D008338 3.3e-98 362.1 223 78.5
Potri.009G026700 Populus trichocarpa HOM05D006681 ORTHO05D008338 5.7e-98 361.3 222 77.5
MD11G1116600 Malus domestica HOM05D006681 ORTHO05D008338 7.5e-98 360.9 218 78.0
Cc01_g12140 Coffea canephora HOM05D006681 ORTHO05D008338 1.7e-97 359.8 227 74.0
Rhsim13G0088300 Rhododendron simsii HOM05D006681 ORTHO05D008338 2.2e-97 359.4 238 74.8
Prupe.6G086900 Prunus persica HOM05D006681 ORTHO05D008338 6.3e-97 357.8 218 78.9
Nn2g10531 Nelumbo nucifera HOM05D006681 ORTHO05D008338 4.1e-96 355.1 220 76.4
SGA_v2.0_scaffold134G34764 Striga asiatica HOM05D006681 ORTHO05D008338 4.1e-96 355.1 223 75.8
CiPaw.13G101600 Carya illinoinensis HOM05D006681 ORTHO05D008338 5.3e-96 354.8 218 78.0
COL.COLO4_18427 Corchorus olitorius HOM05D006681 ORTHO05D008338 2.0e-95 352.8 227 74.0
Sabra09G0017800 Salix brachista HOM05D006681 ORTHO05D008338 2.7e-95 352.4 222 76.1
Migut.D02146 Erythranthe guttata HOM05D006681 ORTHO05D008338 3.5e-95 352.1 225 73.8
Gorai.009G102400 Gossypium raimondii HOM05D006681 ORTHO05D008338 7.7e-95 350.9 219 76.3
FAN21G0481 Fragaria x ananassa HOM05D006681 ORTHO05D008338 1.0e-94 350.5 249 71.1
Sopen11g030630 Solanum pennellii HOM05D006681 ORTHO05D008338 1.0e-94 350.5 224 74.6
Duzib170G0311 Durio zibethinus HOM05D006681 ORTHO05D008338 1.7e-94 349.7 227 73.1
Lsat_1_v5_gn_8_78740 Lactuca sativa HOM05D006681 ORTHO05D008338 2.2e-94 349.4 219 76.7
Solyc11g072970.2 Solanum lycopersicum HOM05D006681 ORTHO05D008338 2.2e-94 349.4 224 74.6
PGSC0003DMG400015551 Solanum tuberosum HOM05D006681 ORTHO05D008338 2.2e-94 349.4 224 75.0
Gohir.A05G098700 Gossypium hirsutum HOM05D006681 ORTHO05D008338 2.9e-94 349.0 219 75.8
Gohir.D05G098750 Gossypium hirsutum HOM05D006681 ORTHO05D008338 2.9e-94 349.0 219 75.8
Lalb_Chr03g0026931 Lupinus albus HOM05D006681 ORTHO05D008338 6.5e-94 347.8 227 74.4
TWI31G0387 Tripterygium wilfordii HOM05D006681 ORTHO05D008338 6.5e-94 347.8 220 75.0
MSTRG.18607 Avicennia marina HOM05D006681 ORTHO05D008338 1.5e-93 346.7 229 71.6
HanXRQChr05g0134071 Helianthus annuus HOM05D006681 ORTHO05D008338 4.2e-93 345.1 219 77.6
CAN.G1647.1 Capsicum annuum HOM05D006681 ORTHO05D008338 7.2e-93 344.4 218 75.2
Cpa.g.sc2126.1 Carica papaya HOM05D006681 ORTHO05D008338 1.2e-92 343.6 206 78.2
Medtr4g062130 Medicago truncatula HOM05D006681 ORTHO05D008338 8.0e-92 340.9 219 76.7
CANSAT54G2145 Cannabis sativa HOM05D006681 ORTHO05D008338 1.0e-91 340.5 218 73.9
Ca_19209_v3 Cicer arietinum L. HOM05D006681 ORTHO05D008338 4.0e-91 338.6 219 74.9
Peaxi162Scf00411g00068 Petunia axillaris HOM05D006681 ORTHO05D008338 1.2e-90 337.0 218 72.9
SalBow3G4078 Salvia bowleyana HOM05D006681 ORTHO05D008338 1.2e-90 337.0 224 70.5
arahy.Tifrunner.gnm1.ann1.SK7GFS Arachis hypogaea HOM05D006681 ORTHO05D008338 2.6e-90 335.9 222 73.4
Lj3g0002575 Lotus japonicus HOM05D006681 ORTHO05D008338 4.4e-90 335.1 219 76.7
TPR.G3006 Trifolium pratense HOM05D006681 ORTHO05D008338 5.7e-90 334.7 219 74.9
Duzib168G1095 Durio zibethinus HOM05D006681 ORTHO05D008338 9.8e-90 334.0 205 77.6
arahy.Tifrunner.gnm1.ann1.FZI6FG Arachis hypogaea HOM05D006681 ORTHO05D008338 1.3e-89 333.6 222 73.0
Eucgr.J02098 Eucalyptus grandis HOM05D006681 ORTHO05D008338 1.7e-89 333.2 238 66.8
Psat7g220640 Pisum sativum HOM05D006681 ORTHO05D008338 2.2e-89 332.8 219 74.9
PSO339G5789 Papaver somniferum HOM05D006681 ORTHO05D008338 3.7e-89 332.0 220 72.3
DCAR_006014 Daucus carota HOM05D006681 ORTHO05D008338 4.8e-89 331.6 222 71.6
Phvul.011G069100 Phaseolus vulgaris HOM05D006681 ORTHO05D008338 1.4e-88 330.1 222 73.0
EL10Ac7g15941 Beta vulgaris HOM05D006681 ORTHO05D008338 1.8e-88 329.7 219 73.1
Sed0010670 Sechium edule HOM05D006681 ORTHO05D008338 4.1e-88 328.6 219 73.5
MBI14_g35939_MAGBIO Magnolia biondii HOM05D006681 ORTHO05D008338 7.0e-88 327.8 237 67.5
PGR119G1802 Punica granatum HOM05D006681 ORTHO05D008338 7.0e-88 327.8 238 71.0
Aqoxy4G03072 Aquilegia oxysepala HOM05D006681 ORTHO05D008338 2.7e-87 325.9 220 71.4
PSO384G0101 Papaver somniferum HOM05D006681 ORTHO05D008338 2.7e-87 325.9 220 71.4
THA.LOC104814870 Tarenaya hassleriana HOM05D006681 ORTHO05D008338 5.9e-87 324.7 218 69.7
CsaV3_6G022080 Cucumis sativus L. HOM05D006681 ORTHO05D008338 1.0e-86 323.9 222 69.4
AUR62001852 Chenopodium quinoa HOM05D006681 ORTHO05D008338 2.3e-86 322.8 231 68.8
VMungo1127G1059 Vigna mungo HOM05D006681 ORTHO05D008338 8.6e-86 320.9 243 67.5
AL5G24960 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 1.5e-85 320.1 220 69.5
Lj1A175T11 Lonicera japonica HOM05D006681 ORTHO05D008338 2.5e-85 319.3 227 70.5
Carub.0005s1203 Capsella rubella HOM05D006681 ORTHO05D008338 4.2e-85 318.5 218 68.8
Thhalv10002615m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 8.0e-84 314.3 219 68.9
AT3G46200 Arabidopsis thaliana HOM05D006681 ORTHO05D008338 1.5e-82 310.1 219 68.0
ClCG02G020630 Citrullus lanatus HOM05D006681 ORTHO05D008338 5.7e-82 308.1 274 59.9
Manes.11G136100 Manihot esculenta HOM05D006681 ORTHO05D008338 5.7e-82 308.1 222 70.7
Os05g0117500 Oryza sativa ssp. japonica HOM05D006681 ORTHO05D008338 1.3e-81 307.0 220 67.7
Nitab4.5_0002684g0160 Nicotiana tabacum HOM05D006681 ORTHO05D008338 4.9e-81 305.1 229 66.4
FAN25G3219 Fragaria x ananassa HOM05D006681 ORTHO05D008338 8.3e-81 304.3 224 70.1
Glyma.12G075000 Glycine max HOM05D006681 ORTHO05D008338 2.4e-80 302.8 224 67.9
C03p70520 Brassica napus HOM05D006681 ORTHO05D008338 7.0e-80 301.2 218 66.1
BolC3t19336H Brassica oleracea HOM05D006681 ORTHO05D008338 7.0e-80 301.2 218 66.1
vmacro03125 Vaccinium macrocarpon HOM05D006681 ORTHO05D008338 1.2e-79 300.4 237 65.8
HPP92_006593 Vanilla planifolia HOM05D006681 ORTHO05D008338 3.5e-79 298.9 219 64.4
Sp5g15430 Schrenkiella parvula HOM05D006681 ORTHO05D008338 4.5e-79 298.5 218 66.1
BcaC01g01926 Brassica carinata HOM05D006681 ORTHO05D008338 1.3e-78 297.0 218 64.7
BraA06t25188Z Brassica rapa HOM05D006681 ORTHO05D008338 1.3e-78 297.0 218 65.1
A06p21000 Brassica napus HOM05D006681 ORTHO05D008338 2.9e-78 295.8 218 65.1
Zm00001eb266060 Zea mays HOM05D006681 ORTHO05D008338 1.5e-77 293.5 221 64.3
Nitab4.5_0002684g0190 Nicotiana tabacum HOM05D006681 ORTHO05D008338 5.2e-75 285.0 218 67.0
Carub.0003s2829 Capsella rubella HOM05D006681 ORTHO05D008338 1.5e-74 283.5 218 62.8
Aa31LG4G15300 Aethionema arabicum HOM05D006681 ORTHO05D008338 2.7e-71 272.7 293 49.5
Thhalv10002633m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 1.1e-69 267.3 219 60.7
AUR62009646 Chenopodium quinoa HOM05D006681 ORTHO05D008338 1.6e-68 263.5 175 69.7
Hund05017 Selenicereus undatus HOM05D006681 ORTHO05D008338 1.6e-68 263.5 206 65.0
Ah.08g214980 Amaranthus hybridus HOM05D006681 ORTHO05D008338 2.8e-68 262.7 229 60.3
SMO367G0798 Selaginella moellendorffii HOM05D006681 ORTHO05D008338 7.5e-66 254.6 219 56.2
MELO3C013668.2 Cucumis melo HOM05D006681 ORTHO05D008338 1.1e-64 250.8 218 58.3
Pp3c11_23040 Physcomitrium patens HOM05D006681 ORTHO05D008338 2.4e-64 249.6 220 54.1
Haze_24007 Corylus avellana HOM05D006681 ORTHO05D008338 7.0e-64 248.1 355 44.5
Nitab4.5_0001953g0020 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.0e-62 244.2 213 59.6
Lj3g0011020 Lotus japonicus HOM05D006681 ORTHO05D008338 3.0e-62 242.7 160 75.0
Mapoly0128s0008 Marchantia polymorpha HOM05D006681 ORTHO05D008338 1.1e-61 240.7 218 53.2
AL1G56400 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 7.3e-61 238.0 181 61.9
AagrBONN_evm.TU.Sc2ySwM_228.1772 Anthoceros agrestis HOM05D006681 ORTHO05D008338 2.1e-60 236.5 218 53.2
ATR0759G055 Amborella trichopoda HOM05D006681 ORTHO05D008338 1.1e-56 224.2 160 64.4
CBR_g415 Chara braunii HOM05D006681 ORTHO05D008338 9.6e-45 184.5 278 37.4
Nitab4.5_0001953g0050 Nicotiana tabacum HOM05D006681 ORTHO05D008338 2.4e-43 179.9 145 61.4
Sc06g0008200 Simmondsia chinensis HOM05D006681 ORTHO05D008338 2.9e-41 172.9 126 65.1
Sc06g0008190 Simmondsia chinensis HOM05D006681 ORTHO05D008338 3.2e-40 169.5 112 71.4
Glyma.11G145018 Glycine max HOM05D006681 ORTHO05D008338 1.0e-38 164.5 110 67.3
SEGI_27570 Sequoiadendron giganteum HOM05D006681 ORTHO05D008338 1.6e-31 140.6 130 56.9
Pp3c11_23047 Physcomitrium patens HOM05D006681 ORTHO05D008338 1.1e-29 134.4 111 56.8
CAN.G1289.2 Capsicum annuum HOM05D006681 ORTHO05D008338 2.1e-28 130.2 125 57.6
Actinidia20468 Actinidia chinensis HOM05D006681 ORTHO05D008338 3.2e-24 116.3 79 70.9
MCO11G760 Micromonas commoda HOM05D006681 ORTHO05D008338 4.6e-23 112.5 208 33.2
Nitab4.5_0000766g0030 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.0e-22 111.3 105 58.1
PRCOL_00001211 Prasinoderma coloniale HOM05D006681 ORTHO05D008338 3.4e-10 69.7 185 26.5
CARHR154620 Cardamine hirsuta HOM05D006681 ORTHO05D008338 4.2e-08 62.8 51 60.8


User provided reference genes

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