Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv32750 Davidia involucrata HOM05D005227 ORTHO05D006379 2.8e-49 198.4 103 100.0
CSS0013199 Camellia sinensis var. sinensis HOM05D005227 ORTHO05D006379 7.0e-45 183.7 103 91.3
Cc09_g04960 Coffea canephora HOM05D005227 ORTHO05D006379 7.8e-44 180.3 102 87.3
Dinv26307 Davidia involucrata HOM05D005227 ORTHO05D006379 1.0e-43 179.9 103 87.4
Lalb_Chr10g0097141 Lupinus albus HOM05D005227 ORTHO05D006379 2.5e-42 175.3 103 86.4
Peaxi162Scf00890g00011 Petunia axillaris HOM05D005227 ORTHO05D006379 3.3e-42 174.9 102 86.3
PGSC0003DMG400031097 Solanum tuberosum HOM05D005227 ORTHO05D006379 3.3e-42 174.9 103 86.4
GSVIVG01012160001 Vitis vinifera HOM05D005227 ORTHO05D006379 3.3e-42 174.9 99 90.9
CAN.G585.8 Capsicum annuum HOM05D005227 ORTHO05D006379 7.3e-42 173.7 103 86.4
Thecc.03G046200 Theobroma cacao HOM05D005227 ORTHO05D006379 7.3e-42 173.7 103 85.4
Nn7g38372 Nelumbo nucifera HOM05D005227 ORTHO05D006379 9.5e-42 173.3 100 89.0
Sopen07g029430 Solanum pennellii HOM05D005227 ORTHO05D006379 1.2e-41 172.9 103 85.4
Nitab4.5_0000743g0160 Nicotiana tabacum HOM05D005227 ORTHO05D006379 1.6e-41 172.6 103 85.4
Actinidia33652 Actinidia chinensis HOM05D005227 ORTHO05D006379 6.2e-41 170.6 103 84.5
Prupe.1G101300 Prunus persica HOM05D005227 ORTHO05D006379 6.2e-41 170.6 102 83.3
Solyc07g056070.2 Solanum lycopersicum HOM05D005227 ORTHO05D006379 6.2e-41 170.6 103 83.5
MSTRG.21442 Avicennia marina HOM05D005227 ORTHO05D006379 1.1e-40 169.9 100 85.0
ClCG03G004140 Citrullus lanatus HOM05D005227 ORTHO05D006379 1.1e-40 169.9 103 83.5
Peaxi162Scf00254g00421 Petunia axillaris HOM05D005227 ORTHO05D006379 1.4e-40 169.5 97 87.6
MELO3C002397.2 Cucumis melo HOM05D005227 ORTHO05D006379 1.8e-40 169.1 102 83.3
arahy.Tifrunner.gnm1.ann1.59GI1K Arachis hypogaea HOM05D005227 ORTHO05D006379 2.3e-40 168.7 100 85.0
arahy.Tifrunner.gnm1.ann1.GL2DWM Arachis hypogaea HOM05D005227 ORTHO05D006379 2.3e-40 168.7 100 85.0
PGR004G2312 Punica granatum HOM05D005227 ORTHO05D006379 2.3e-40 168.7 98 87.8
Sopen07g027180 Solanum pennellii HOM05D005227 ORTHO05D006379 2.3e-40 168.7 103 82.5
PGSC0003DMG401020444 Solanum tuberosum HOM05D005227 ORTHO05D006379 2.3e-40 168.7 103 82.5
CsaV3_1G010070 Cucumis sativus L. HOM05D005227 ORTHO05D006379 4.0e-40 167.9 103 82.5
Sed0019581 Sechium edule HOM05D005227 ORTHO05D006379 4.0e-40 167.9 103 82.5
Duzib084G1247 Durio zibethinus HOM05D005227 ORTHO05D006379 5.2e-40 167.5 103 79.6
QL07p000144 Quercus lobata HOM05D005227 ORTHO05D006379 6.8e-40 167.2 102 82.4
QL08p045548 Quercus lobata HOM05D005227 ORTHO05D006379 6.8e-40 167.2 102 82.4
Solyc07g055030.1 Solanum lycopersicum HOM05D005227 ORTHO05D006379 6.8e-40 167.2 103 81.6
TAR627G1207 Trochodendron aralioides HOM05D005227 ORTHO05D006379 6.8e-40 167.2 103 83.5
Lalb_Chr17g0339811 Lupinus albus HOM05D005227 ORTHO05D006379 8.9e-40 166.8 103 81.6
unitig_8.g3748 Utricularia gibba HOM05D005227 ORTHO05D006379 8.9e-40 166.8 103 79.6
CiPaw.09G138800 Carya illinoinensis HOM05D005227 ORTHO05D006379 1.5e-39 166.0 102 81.4
Atru.chr8.505 Acer truncatum HOM05D005227 ORTHO05D006379 2.0e-39 165.6 103 80.6
TWI81G0571 Tripterygium wilfordii HOM05D005227 ORTHO05D006379 3.4e-39 164.9 100 84.0
COL.COLO4_36891 Corchorus olitorius HOM05D005227 ORTHO05D006379 4.4e-39 164.5 103 80.6
arahy.Tifrunner.gnm1.ann1.BUN8CC Arachis hypogaea HOM05D005227 ORTHO05D006379 5.8e-39 164.1 100 83.0
Duzib205G0364 Durio zibethinus HOM05D005227 ORTHO05D006379 5.8e-39 164.1 100 81.0
Migut.D00502 Erythranthe guttata HOM05D005227 ORTHO05D006379 5.8e-39 164.1 99 81.8
ATR0752G166 Amborella trichopoda HOM05D005227 ORTHO05D006379 7.5e-39 163.7 98 82.7
Manes.03G071400 Manihot esculenta HOM05D005227 ORTHO05D006379 7.5e-39 163.7 102 81.4
Cpa.g.c40334 Carica papaya HOM05D005227 ORTHO05D006379 9.8e-39 163.3 103 79.6
Gohir.A11G165700 Gossypium hirsutum HOM05D005227 ORTHO05D006379 9.8e-39 163.3 103 79.6
SGA_v2.0_scaffold1G00678 Striga asiatica HOM05D005227 ORTHO05D006379 1.3e-38 162.9 99 79.8
Atru.chr9.939 Acer truncatum HOM05D005227 ORTHO05D006379 1.7e-38 162.5 103 79.6
Cfa001143 Carpinus fangiana HOM05D005227 ORTHO05D006379 1.7e-38 162.5 102 80.4
Ciclev10017275m.g Citrus clementina HOM05D005227 ORTHO05D006379 1.7e-38 162.5 100 83.0
Gohir.D11G171900 Gossypium hirsutum HOM05D005227 ORTHO05D006379 1.7e-38 162.5 103 79.6
Gorai.007G184300 Gossypium raimondii HOM05D005227 ORTHO05D006379 1.7e-38 162.5 103 79.6
Sed0010668 Sechium edule HOM05D005227 ORTHO05D006379 1.7e-38 162.5 103 80.6
PGR142G0063 Punica granatum HOM05D005227 ORTHO05D006379 2.2e-38 162.2 98 84.7
AL8G14830 Arabidopsis lyrata HOM05D005227 ORTHO05D006379 2.9e-38 161.8 103 78.6
Eucgr.D00008 Eucalyptus grandis HOM05D005227 ORTHO05D006379 2.9e-38 161.8 100 79.0
Glyma.07G072800 Glycine max HOM05D005227 ORTHO05D006379 2.9e-38 161.8 103 79.6
Sc15g0005680 Simmondsia chinensis HOM05D005227 ORTHO05D006379 2.9e-38 161.8 97 80.4
Nitab4.5_0001904g0080 Nicotiana tabacum HOM05D005227 ORTHO05D006379 3.7e-38 161.4 103 79.6
EL10Ac4g09705 Beta vulgaris HOM05D005227 ORTHO05D006379 4.9e-38 161.0 96 83.3
Haze_05241 Corylus avellana HOM05D005227 ORTHO05D006379 4.9e-38 161.0 102 80.4
MD05G1245000 Malus domestica HOM05D005227 ORTHO05D006379 6.4e-38 160.6 94 85.1
TWI15G1171 Tripterygium wilfordii HOM05D005227 ORTHO05D006379 6.4e-38 160.6 103 78.6
Lsat_1_v5_gn_5_150700 Lactuca sativa HOM05D005227 ORTHO05D006379 8.3e-38 160.2 98 82.7
AT5G44710 Arabidopsis thaliana HOM05D005227 ORTHO05D006379 1.1e-37 159.8 103 77.7
HanXRQChr01g0006241 Helianthus annuus HOM05D005227 ORTHO05D006379 1.4e-37 159.5 103 76.7
Carub.0001s3436 Capsella rubella HOM05D005227 ORTHO05D006379 1.9e-37 159.1 103 76.7
HanXRQChr01g0006251 Helianthus annuus HOM05D005227 ORTHO05D006379 1.9e-37 159.1 99 78.8
Thhalv10001080m.g Eutrema salsugineum HOM05D005227 ORTHO05D006379 3.2e-37 158.3 103 76.7
Glyma.03G013100 Glycine max HOM05D005227 ORTHO05D006379 3.2e-37 158.3 103 78.6
THA.LOC104806226 Tarenaya hassleriana HOM05D005227 ORTHO05D006379 3.2e-37 158.3 103 76.7
MD10G1226300 Malus domestica HOM05D005227 ORTHO05D006379 4.1e-37 157.9 94 84.0
CANSAT21G1070 Cannabis sativa HOM05D005227 ORTHO05D006379 5.4e-37 157.5 100 79.0
CARHR178190 Cardamine hirsuta HOM05D005227 ORTHO05D006379 7.0e-37 157.1 102 76.5
BcaC06g31592 Brassica carinata HOM05D005227 ORTHO05D006379 1.6e-36 156.0 103 75.7
BcaC06g31593 Brassica carinata HOM05D005227 ORTHO05D006379 1.6e-36 156.0 103 75.7
HPP92_006340 Vanilla planifolia HOM05D005227 ORTHO05D006379 2.1e-36 155.6 98 79.6
A02p28550 Brassica napus HOM05D005227 ORTHO05D006379 2.7e-36 155.2 103 75.7
BraA02t07892Z Brassica rapa HOM05D005227 ORTHO05D006379 2.7e-36 155.2 103 75.7
Phvul.010G097600 Phaseolus vulgaris HOM05D005227 ORTHO05D006379 2.7e-36 155.2 98 81.6
Aqoxy1G01370 Aquilegia oxysepala HOM05D005227 ORTHO05D006379 3.5e-36 154.8 98 78.6
Carub.0008s0355 Capsella rubella HOM05D005227 ORTHO05D006379 3.5e-36 154.8 100 76.0
Cfa001148 Carpinus fangiana HOM05D005227 ORTHO05D006379 3.5e-36 154.8 102 76.5
Lj3g0019179 Lotus japonicus HOM05D005227 ORTHO05D006379 3.5e-36 154.8 103 78.6
BolC2t10561H Brassica oleracea HOM05D005227 ORTHO05D006379 4.6e-36 154.5 100 77.0
BcaB07g30501 Brassica carinata HOM05D005227 ORTHO05D006379 6.0e-36 154.1 103 74.8
Oeu041343.1 Olea europaea HOM05D005227 ORTHO05D006379 6.0e-36 154.1 98 79.6
BraA06t27572Z Brassica rapa HOM05D005227 ORTHO05D006379 7.8e-36 153.7 103 75.7
AUR62042297 Chenopodium quinoa HOM05D005227 ORTHO05D006379 1.0e-35 153.3 98 76.5
SalBow2G2250 Salvia bowleyana HOM05D005227 ORTHO05D006379 1.0e-35 153.3 100 77.0
BcaC03g16691 Brassica carinata HOM05D005227 ORTHO05D006379 1.3e-35 152.9 100 76.0
BcaC06g34520 Brassica carinata HOM05D005227 ORTHO05D006379 1.3e-35 152.9 103 73.8
C07p27610 Brassica napus HOM05D005227 ORTHO05D006379 1.3e-35 152.9 103 73.8
FAN21G2110 Fragaria x ananassa HOM05D005227 ORTHO05D006379 1.3e-35 152.9 96 79.2
BolC7t43294H Brassica oleracea HOM05D003109 ORTHO05D003578 1.7e-35 152.5 102 73.5
RcHm_v2.0_Chr3g0492041 Rosa chinensis HOM05D005227 ORTHO05D006379 2.3e-35 152.1 101 74.3
BcaB07g30937 Brassica carinata HOM05D005227 ORTHO05D006379 3.0e-35 151.8 103 73.8
Ciclev10010372m.g Citrus clementina HOM05D005227 ORTHO05D006379 3.9e-35 151.4 100 79.0
FvH4_3g13100 Fragaria vesca HOM05D005227 ORTHO05D006379 3.9e-35 151.4 96 78.1
FAN11G3694 Fragaria x ananassa HOM05D005227 ORTHO05D006379 3.9e-35 151.4 96 78.1
FAN16G1292 Fragaria x ananassa HOM05D005227 ORTHO05D006379 3.9e-35 151.4 96 78.1
RcHm_v2.0_Chr5g0021361 Rosa chinensis HOM05D005227 ORTHO05D006379 3.9e-35 151.4 98 75.5
Sp2g09520 Schrenkiella parvula HOM05D005227 ORTHO05D006379 3.9e-35 151.4 103 73.8
Os05g0148300 Oryza sativa ssp. japonica HOM05D005227 ORTHO05D006379 5.1e-35 151.0 100 74.0
Aa31LG9G8450 Aethionema arabicum HOM05D003109 ORTHO05D003578 6.6e-35 150.6 99 74.7
A09p21240 Brassica napus HOM05D005227 ORTHO05D006379 8.6e-35 150.2 103 72.8
BraA09t37729Z Brassica rapa HOM05D005227 ORTHO05D006379 8.6e-35 150.2 103 72.8
PSO832G3358 Papaver somniferum HOM05D005227 ORTHO05D006379 8.6e-35 150.2 95 81.1
TPR.G4382 Trifolium pratense HOM05D005227 ORTHO05D006379 8.6e-35 150.2 99 76.8
Zm00001eb354280 Zea mays HOM05D005227 ORTHO05D006379 8.6e-35 150.2 100 73.0
ECA248G3549 Erigeron canadensis HOM05D005227 ORTHO05D006379 1.5e-34 149.4 103 73.8
TPR.G1285 Trifolium pratense HOM05D005227 ORTHO05D006379 1.5e-34 149.4 103 73.8
Glyma.03G084100 Glycine max HOM05D005227 ORTHO05D006379 1.9e-34 149.1 98 76.5
PSO198G0154 Papaver somniferum HOM05D005227 ORTHO05D006379 2.5e-34 148.7 95 80.0
Rhsim13G0134700 Rhododendron simsii HOM05D005227 ORTHO05D006379 2.5e-34 148.7 98 76.5
RhsimUnG0177600 Rhododendron simsii HOM05D005227 ORTHO05D006379 2.5e-34 148.7 98 76.5
PSO541G1361 Papaver somniferum HOM05D005227 ORTHO05D006379 4.3e-34 147.9 95 80.0
Medtr8g031320 Medicago truncatula HOM05D005227 ORTHO05D006379 5.6e-34 147.5 103 72.8
Potri.003G155000 Populus trichocarpa HOM05D005227 ORTHO05D006379 1.6e-33 146.0 99 74.7
Sabra03G0112200 Salix brachista HOM05D005861 ORTHO05D007151 2.8e-33 145.2 99 73.7
PSO541G0222 Papaver somniferum HOM05D005227 ORTHO05D006379 3.6e-33 144.8 95 77.9
PSO675G1867 Papaver somniferum HOM05D005227 ORTHO05D006379 3.6e-33 144.8 95 77.9
CDE05G2352 Ceratophyllum demersum HOM05D005227 ORTHO05D006379 4.7e-33 144.4 95 74.7
Dinv26329 Davidia involucrata HOM05D005227 ORTHO05D006379 1.4e-29 132.9 74 83.8
CSS0027348 Camellia sinensis var. sinensis HOM05D005227 ORTHO05D006379 1.7e-27 125.9 104 68.3
CSS0030749 Camellia sinensis var. sinensis HOM05D005227 ORTHO05D006379 1.7e-27 125.9 104 68.3
DCAR_003751 Daucus carota HOM05D005861 ORTHO05D007151 1.9e-26 122.5 77 74.0
Ah.06g187780 Amaranthus hybridus HOM05D005227 ORTHO05D006379 4.3e-26 121.3 157 46.5
arahy.Tifrunner.gnm1.ann1.RE1YA1 Arachis hypogaea HOM05D005227 ORTHO05D006379 4.0e-24 114.8 70 77.1
Psat0s277g0080 Pisum sativum HOM05D005227 ORTHO05D006379 4.9e-22 107.8 73 71.2
Psat4g202600 Pisum sativum HOM05D005227 ORTHO05D006379 6.4e-22 107.5 73 69.9
AUR62040506 Chenopodium quinoa HOM05D005227 ORTHO05D006379 8.4e-22 107.1 65 73.8
VMungo0859G0001 Vigna mungo HOM05D005227 ORTHO05D006379 8.4e-22 107.1 68 75.0
CDE02G3990 Ceratophyllum demersum HOM05D001323 ORTHO05D001223 1.9e-21 105.9 68 72.1
Ca_23647_v3 Cicer arietinum L. HOM05D005227 ORTHO05D006379 2.4e-21 105.5 73 68.5
FAN25G2025 Fragaria x ananassa HOM05D005227 ORTHO05D006379 7.1e-21 104.0 85 63.5
Pp3c15_4210 Physcomitrium patens HOM05D005227 ORTHO05D006379 7.8e-20 100.5 89 60.7
AagrBONN_evm.TU.Sc2ySwM_228.4328 Anthoceros agrestis HOM05D005227 ORTHO05D006379 1.0e-19 100.1 88 60.2
AUR62035552 Chenopodium quinoa HOM05D005227 ORTHO05D006379 3.0e-19 98.6 83 59.0
C02p45310 Brassica napus HOM05D005227 ORTHO05D006379 8.7e-19 97.1 62 77.4
BcaC04g21823 Brassica carinata HOM05D005227 ORTHO05D006379 9.6e-18 93.6 103 54.4
Ciclev10006880m.g Citrus clementina HOM05D005227 ORTHO05D006379 6.4e-14 80.9 98 53.1
Lsat_1_v5_gn_4_103780 Lactuca sativa HOM05D005227 ORTHO05D006379 8.4e-14 80.5 61 63.9
Mapoly0090s0044 Marchantia polymorpha HOM05D005227 ORTHO05D006379 8.4e-14 80.5 83 51.8
HPP92_027864 Vanilla planifolia HOM05D005227 ORTHO05D006379 1.1e-13 80.1 54 70.4
C09p27040 Brassica napus HOM05D005227 ORTHO05D006379 1.5e-10 69.7 75 53.3
MCO07G459 Micromonas commoda HOM05D005227 ORTHO05D006379 6.2e-09 64.3 85 49.4
Cfa022274 Carpinus fangiana HOM05D005227 ORTHO05D006379 1.2e-07 60.1 101 37.6


User provided reference genes

Program Settings