Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv32513 Davidia involucrata HOM05D003611 ORTHO05D004281 5.7e-42 173.7 81 100.0
Dinv43856 Davidia involucrata HOM05D003611 ORTHO05D004281 4.0e-35 151.0 81 86.4
CSS0009973 Camellia sinensis var. sinensis HOM05D003611 ORTHO05D004281 5.7e-34 147.1 81 82.7
CSS0038908 Camellia sinensis var. sinensis HOM05D003611 ORTHO05D004281 1.2e-31 139.4 81 80.2
Prupe.2G176000 Prunus persica HOM05D003611 ORTHO05D004281 3.5e-31 137.9 81 76.5
Hma1.2p1_0627F.1_g191700 Hydrangea macrophylla HOM05D003611 ORTHO05D004281 1.0e-30 136.3 81 77.8
Actinidia02822 Actinidia chinensis HOM05D003611 ORTHO05D004281 2.3e-30 135.2 81 77.8
CiPaw.01G065700 Carya illinoinensis HOM05D003611 ORTHO05D004281 5.0e-30 134.0 81 72.8
Cc02_g38450 Coffea canephora HOM05D003611 ORTHO05D004281 1.1e-29 132.9 81 77.8
Thecc.01G353800 Theobroma cacao HOM05D003611 ORTHO05D004281 1.9e-29 132.1 83 77.1
TAR375G0370 Trochodendron aralioides HOM05D003611 ORTHO05D004281 2.5e-29 131.7 79 77.2
COL.COLO4_12765 Corchorus olitorius HOM05D003611 ORTHO05D004281 9.5e-29 129.8 83 74.7
Cfa003881 Carpinus fangiana HOM05D003611 ORTHO05D004281 1.6e-28 129.0 79 73.4
MD07G1132600 Malus domestica HOM05D003611 ORTHO05D004281 3.6e-28 127.9 82 74.4
QL04p055101 Quercus lobata HOM05D003611 ORTHO05D004281 8.0e-28 126.7 80 71.2
MD01G1069900 Malus domestica HOM05D003611 ORTHO05D004281 1.8e-27 125.6 82 74.4
Duzib133G0517 Durio zibethinus HOM05D003611 ORTHO05D004281 4.0e-27 124.4 85 72.9
CiPaw.02G033900 Carya illinoinensis HOM05D003611 ORTHO05D004281 2.0e-26 122.1 81 66.7
FAN03G1353 Fragaria x ananassa HOM05D003611 ORTHO05D004281 3.4e-26 121.3 83 69.9
RcHm_v2.0_Chr1g0357311 Rosa chinensis HOM05D003611 ORTHO05D004281 4.4e-26 120.9 83 69.9
FvH4_7g15120 Fragaria vesca HOM05D003611 ORTHO05D004281 5.7e-26 120.6 83 69.9
FAN06G0771 Fragaria x ananassa HOM05D003611 ORTHO05D004281 5.7e-26 120.6 83 69.9
Atru.chr5.552 Acer truncatum HOM05D003611 ORTHO05D004281 1.3e-25 119.4 81 66.7
Eucgr.E00101 Eucalyptus grandis HOM05D003611 ORTHO05D004281 1.7e-25 119.0 86 67.4
FAN06G4234 Fragaria x ananassa HOM05D003611 ORTHO05D004281 1.7e-25 119.0 83 68.7
FAN10G1370 Fragaria x ananassa HOM05D003611 ORTHO05D004281 1.7e-25 119.0 83 68.7
FAN10G4104 Fragaria x ananassa HOM05D003611 ORTHO05D004281 1.7e-25 119.0 83 68.7
FAN01G0094 Fragaria x ananassa HOM05D003611 ORTHO05D004281 2.2e-25 118.6 83 68.7
Manes.05G030300 Manihot esculenta HOM05D003611 ORTHO05D004281 2.9e-25 118.2 81 66.7
TWI14G0836 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 4.9e-25 117.5 81 66.7
Potri.002G163000 Populus trichocarpa HOM05D003611 ORTHO05D004281 6.4e-25 117.1 81 69.1
Nn1g01656 Nelumbo nucifera HOM05D003611 ORTHO05D004281 1.8e-24 115.5 81 65.4
Ciclev10018621m.g Citrus clementina HOM05D003611 ORTHO05D004281 3.2e-24 114.8 84 64.3
Actinidia20152 Actinidia chinensis HOM05D003611 ORTHO05D004281 4.1e-24 114.4 80 63.8
Sabra14G0064800 Salix brachista HOM05D003611 ORTHO05D004281 4.1e-24 114.4 81 66.7
TWI59G0398 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 5.4e-24 114.0 81 63.0
Hma1.2p1_0623F.1_g191005 Hydrangea macrophylla HOM05D003611 ORTHO05D004281 7.0e-24 113.6 67 76.1
TWI23G0144 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 9.2e-24 113.2 81 64.2
Potri.014G089200 Populus trichocarpa HOM05D003611 ORTHO05D004281 1.2e-23 112.8 81 66.7
Rhsim07G0011300 Rhododendron simsii HOM05D003611 ORTHO05D004281 2.0e-23 112.1 82 67.1
Gohir.A11G091700 Gossypium hirsutum HOM05D003611 ORTHO05D004281 3.5e-23 111.3 87 66.7
Sabra02G0147500 Salix brachista HOM05D003611 ORTHO05D004281 3.5e-23 111.3 81 65.4
Actinidia18539 Actinidia chinensis HOM05D003611 ORTHO05D004281 7.8e-23 110.2 81 67.9
Gohir.D11G096300 Gossypium hirsutum HOM05D003611 ORTHO05D004281 1.3e-22 109.4 87 64.4
vmacro13239 Vaccinium macrocarpon HOM05D003611 ORTHO05D004281 2.3e-22 108.6 108 55.6
Oeu018963.2 Olea europaea HOM05D003611 ORTHO05D004281 3.0e-22 108.2 81 65.4
Gorai.007G102800 Gossypium raimondii HOM05D003611 ORTHO05D004281 3.9e-22 107.8 87 65.5
Gohir.D11G096500 Gossypium hirsutum HOM05D003611 ORTHO05D004281 6.6e-22 107.1 87 65.5
MBI11_g13553_MAGBIO Magnolia biondii HOM05D003611 ORTHO05D004281 6.6e-22 107.1 79 67.1
TAR374G0905 Trochodendron aralioides HOM05D003611 ORTHO05D004281 6.6e-22 107.1 79 64.6
AUR62004403 Chenopodium quinoa HOM05D003611 ORTHO05D004281 2.5e-21 105.1 81 63.0
Migut.B01791 Erythranthe guttata HOM05D003611 ORTHO05D004281 2.5e-21 105.1 82 67.1
Gohir.A11G091600 Gossypium hirsutum HOM05D003611 ORTHO05D004281 2.5e-21 105.1 87 63.2
Lj7A508G38 Lonicera japonica HOM05D003611 ORTHO05D004281 2.5e-21 105.1 85 65.9
PGR042G1491 Punica granatum HOM05D003611 ORTHO05D004281 2.5e-21 105.1 85 64.7
SalBow3G3040 Salvia bowleyana HOM05D003611 ORTHO05D004281 2.5e-21 105.1 81 64.2
AUR62022609 Chenopodium quinoa HOM05D003611 ORTHO05D004281 3.3e-21 104.8 81 63.0
Hund27250 Selenicereus undatus HOM05D003611 ORTHO05D004281 5.6e-21 104.0 77 62.3
Solyc01g095020.3 Solanum lycopersicum HOM05D003611 ORTHO05D004281 5.6e-21 104.0 81 64.2
Glyma.09G255400 Glycine max HOM05D003611 ORTHO05D004281 9.5e-21 103.2 84 65.5
Glyma.18G237600 Glycine max HOM05D003611 ORTHO05D004281 9.5e-21 103.2 84 65.5
Sopen01g038800 Solanum pennellii HOM05D003611 ORTHO05D004281 1.2e-20 102.8 81 63.0
DCAR_008631 Daucus carota HOM05D003611 ORTHO05D004281 2.1e-20 102.1 81 63.0
ECA234G2210 Erigeron canadensis HOM05D003611 ORTHO05D004281 2.1e-20 102.1 82 63.4
Hund16671 Selenicereus undatus HOM05D003611 ORTHO05D004281 2.1e-20 102.1 80 65.0
Phvul.008G059100 Phaseolus vulgaris HOM05D003611 ORTHO05D004281 2.8e-20 101.7 84 64.3
arahy.Tifrunner.gnm1.ann1.9C73IW Arachis hypogaea HOM05D003611 ORTHO05D004281 3.6e-20 101.3 83 67.5
MSTRG.20858 Avicennia marina HOM05D003611 ORTHO05D004281 3.6e-20 101.3 81 64.2
Gorai.007G102600 Gossypium raimondii HOM05D003611 ORTHO05D004281 4.7e-20 100.9 107 52.3
Lj1g0014988 Lotus japonicus HOM05D003611 ORTHO05D004281 4.7e-20 100.9 82 63.4
Sc23g0002620 Simmondsia chinensis HOM05D003611 ORTHO05D004281 6.2e-20 100.5 82 59.8
arahy.Tifrunner.gnm1.ann1.I9FVBP Arachis hypogaea HOM05D003611 ORTHO05D004281 1.1e-19 99.8 83 66.3
Aqoxy7G00231 Aquilegia oxysepala HOM05D003611 ORTHO05D004281 1.4e-19 99.4 79 58.2
Sc01g0003270 Simmondsia chinensis HOM05D003611 ORTHO05D004281 1.4e-19 99.4 82 56.1
Ca_00818_v3 Cicer arietinum L. HOM05D003611 ORTHO05D004281 1.8e-19 99.0 82 61.0
Peaxi162Scf00020g01228 Petunia axillaris HOM05D003611 ORTHO05D004281 1.8e-19 99.0 81 65.4
VMungo1383G2804 Vigna mungo HOM05D003611 ORTHO05D004281 3.1e-19 98.2 80 63.8
Nitab4.5_0010703g0040 Nicotiana tabacum HOM05D003611 ORTHO05D004281 6.8e-19 97.1 81 61.7
Cpa.g.sc184.26 Carica papaya HOM05D003611 ORTHO05D004281 8.9e-19 96.7 81 64.2
Manes.01G253100 Manihot esculenta HOM05D003611 ORTHO05D004281 1.2e-18 96.3 76 63.2
CANSAT56G4470 Cannabis sativa HOM05D003611 ORTHO05D004281 2.0e-18 95.5 84 59.5
Nitab4.5_0000690g0050 Nicotiana tabacum HOM05D003611 ORTHO05D004281 2.0e-18 95.5 81 60.5
Nitab4.5_0000200g0170 Nicotiana tabacum HOM05D003611 ORTHO05D004281 3.4e-18 94.7 81 60.5
EL10Ac1g00365 Beta vulgaris HOM05D003611 ORTHO05D004281 4.4e-18 94.4 81 56.8
GSVIVG01026955001 Vitis vinifera HOM05D003611 ORTHO05D004281 4.4e-18 94.4 74 66.2
Nitab4.5_0000915g0210 Nicotiana tabacum HOM05D003611 ORTHO05D004281 1.3e-17 92.8 80 61.2
Peaxi162Scf00585g00319 Petunia axillaris HOM05D003611 ORTHO05D004281 2.2e-17 92.0 80 60.0
Ah.05g180230 Amaranthus hybridus HOM05D003611 ORTHO05D007544 1.1e-16 89.7 78 59.0
Sed0010511 Sechium edule HOM05D003611 ORTHO05D004281 1.4e-16 89.4 82 56.1
ClCG05G001310 Citrullus lanatus HOM05D003611 ORTHO05D004281 1.9e-16 89.0 81 56.8
MELO3C006087.2 Cucumis melo HOM05D003611 ORTHO05D004281 3.2e-16 88.2 82 56.1
Medtr7g078820 Medicago truncatula HOM05D003611 ORTHO05D004281 4.1e-16 87.8 69 60.9
MSTRG.4840 Avicennia marina HOM05D003611 ORTHO05D004281 7.0e-16 87.0 73 56.2
HanXRQChr17g0562341 Helianthus annuus HOM05D003611 ORTHO05D004281 7.0e-16 87.0 79 57.0
Sopen10g005780 Solanum pennellii HOM05D003611 ORTHO05D004281 1.2e-15 86.3 81 56.8
TPR.G22300 Trifolium pratense HOM05D003611 ORTHO05D004281 1.2e-15 86.3 69 59.4
Solyc10g012030.4 Solanum lycopersicum HOM05D003611 ORTHO05D004281 2.7e-15 85.1 81 55.6
DCAR_006945 Daucus carota HOM05D003611 ORTHO05D004281 3.9e-14 81.3 81 51.9
CsaV3_3G008680 Cucumis sativus L. HOM05D003611 ORTHO05D004281 3.3e-13 78.2 82 52.4
PSO478G2290 Papaver somniferum HOM05D003611 ORTHO05D004281 1.6e-12 75.9 79 53.2
Lalb_Chr10g0096711 Lupinus albus HOM05D003611 ORTHO05D004281 3.6e-12 74.7 55 67.3
Psat3g107120 Pisum sativum HOM05D003611 ORTHO05D004281 4.7e-12 74.3 69 56.5
Lalb_Chr17g0339111 Lupinus albus HOM05D003611 ORTHO05D004281 1.1e-11 73.2 55 63.6
PSO782G0890 Papaver somniferum HOM05D003611 ORTHO05D004281 1.4e-11 72.8 79 50.6
Zm00001eb374330 Zea mays HOM05D003611 ORTHO05D004281 1.4e-11 72.8 84 48.8
AT4G01290 Arabidopsis thaliana HOM05D003611 ORTHO05D004281 3.1e-11 71.6 82 50.0
Os06g0105900 Oryza sativa ssp. japonica HOM05D003611 ORTHO05D004281 3.1e-11 71.6 80 46.2
Sed0009698 Sechium edule HOM05D003611 ORTHO05D004281 4.0e-11 71.2 80 48.8
Lsat_1_v5_gn_4_35681 Lactuca sativa HOM05D003611 ORTHO05D004281 6.8e-11 70.5 77 58.4
Aa31LG5G740 Aethionema arabicum HOM05D003611 ORTHO05D007544 1.2e-10 69.7 81 48.1
Carub.0006s3636 Capsella rubella HOM05D003611 ORTHO05D004281 2.6e-10 68.6 82 50.0
AL6G52100 Arabidopsis lyrata HOM05D003611 ORTHO05D004281 5.8e-10 67.4 82 47.6
Lalb_Chr04g0259231 Lupinus albus HOM05D003611 ORTHO05D004281 7.5e-10 67.0 55 58.2
CARHR249020 Cardamine hirsuta HOM05D003611 ORTHO05D004281 9.9e-10 66.6 82 48.8
Lalb_Chr04g0259241 Lupinus albus HOM05D003611 ORTHO05D004281 6.4e-09 63.9 55 58.2
Sp6g00840 Schrenkiella parvula HOM05D003611 ORTHO05D004281 6.4e-09 63.9 82 45.1
Thhalv10028394m.g Eutrema salsugineum HOM05D003611 ORTHO05D004281 8.3e-09 63.5 82 47.6
BcaB01g02283 Brassica carinata HOM05D003611 ORTHO05D004281 2.4e-08 62.0 85 47.1
THA.LOC104825859 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 2.4e-08 62.0 82 41.5
A03p31960 Brassica napus HOM05D003611 ORTHO05D004281 3.2e-08 61.6 82 45.1
BraA03t12368Z Brassica rapa HOM05D003611 ORTHO05D004281 3.2e-08 61.6 82 45.1
THA.LOC104817035 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 5.4e-08 60.8 81 45.7
BcaC04g24140 Brassica carinata HOM05D003611 ORTHO05D004281 7.1e-08 60.5 85 47.1
C09p00670 Brassica napus HOM05D003611 ORTHO05D004281 7.1e-08 60.5 85 47.1
BolC9t53001H Brassica oleracea HOM05D003611 ORTHO05D004281 7.1e-08 60.5 85 47.1
ATR0661G469 Amborella trichopoda HOM05D003611 ORTHO05D004281 9.2e-08 60.1 73 49.3
BcaC01g06854 Brassica carinata HOM05D003611 ORTHO05D004281 1.2e-07 59.7 82 46.3
BolC3t16170H Brassica oleracea HOM05D003611 ORTHO05D004281 1.2e-07 59.7 82 46.3
A09p00050 Brassica napus HOM05D003611 ORTHO05D004281 2.7e-07 58.5 82 45.1
BraA09t35736Z Brassica rapa HOM05D003611 ORTHO05D004281 2.7e-07 58.5 82 45.1
C03p38980 Brassica napus HOM05D003611 ORTHO05D004281 3.5e-07 58.2 82 41.5
Lalb_Chr17g0339131 Lupinus albus HOM05D003611 ORTHO05D004281 6.0e-07 57.4 58 55.2
BcaB01g02151 Brassica carinata HOM05D003611 ORTHO05D004281 7.8e-07 57.0 82 41.5
THA.LOC104801395 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 3.0e-06 55.1 81 42.0


User provided reference genes

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