Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv32504 Davidia involucrata HOM05D004297 ORTHO05D005213 0.0e+00 2200.2 1101 100.0
Dinv43843 Davidia involucrata HOM05D004297 ORTHO05D005213 0.0e+00 1874.8 1153 84.4
CSS0008006 Camellia sinensis var. sinensis HOM05D004297 ORTHO05D005213 0.0e+00 1792.7 1146 80.5
GSVIVG01026995001 Vitis vinifera HOM05D004297 ORTHO05D005213 0.0e+00 1748.0 1154 78.5
Actinidia20884 Actinidia chinensis HOM05D004297 ORTHO05D005213 0.0e+00 1738.8 1153 78.6
Thecc.01G355600 Theobroma cacao HOM05D004297 ORTHO05D005213 0.0e+00 1738.4 1153 77.8
Actinidia10047 Actinidia chinensis HOM05D004297 ORTHO05D005213 0.0e+00 1737.6 1157 78.3
Cfa003893 Carpinus fangiana HOM05D004297 ORTHO05D005213 0.0e+00 1736.5 1155 77.7
QL04p054287 Quercus lobata HOM05D004297 ORTHO05D005213 0.0e+00 1733.8 1159 77.6
Manes.01G254400 Manihot esculenta HOM05D004297 ORTHO05D005213 0.0e+00 1729.1 1152 76.8
TAR629G2795 Trochodendron aralioides HOM05D004297 ORTHO05D005213 0.0e+00 1726.5 1157 77.3
Gorai.001G159200 Gossypium raimondii HOM05D004297 ORTHO05D005213 0.0e+00 1719.1 1155 76.4
CiPaw.02G033500 Carya illinoinensis HOM05D004297 ORTHO05D005213 0.0e+00 1718.4 1153 77.1
Atru.chr5.535 Acer truncatum HOM05D004297 ORTHO05D005213 0.0e+00 1714.9 1152 76.7
Cpa.g.sc11.37 Carica papaya HOM05D004297 ORTHO05D005213 0.0e+00 1713.0 1103 79.4
Gohir.A07G141200 Gossypium hirsutum HOM05D004297 ORTHO05D005213 0.0e+00 1713.0 1155 76.2
Cc02_g38370 Coffea canephora HOM05D004297 ORTHO05D005213 0.0e+00 1712.6 1147 76.8
Prupe.2G174200 Prunus persica HOM05D004297 ORTHO05D005213 0.0e+00 1712.2 1147 76.3
RcHm_v2.0_Chr7g0221211 Rosa chinensis HOM05D004297 ORTHO05D005213 0.0e+00 1711.0 1150 76.8
Duzib138G1153 Durio zibethinus HOM05D004297 ORTHO05D005213 0.0e+00 1705.6 1127 78.0
Sopen01g038660 Solanum pennellii HOM05D004297 ORTHO05D005213 0.0e+00 1705.3 1159 75.9
Ciclev10018597m.g Citrus clementina HOM05D004297 ORTHO05D005213 0.0e+00 1703.3 1149 76.8
Duzib133G0964 Durio zibethinus HOM05D004297 ORTHO05D005213 0.0e+00 1700.3 1155 75.8
Solyc01g094880.3 Solanum lycopersicum HOM05D004297 ORTHO05D005213 0.0e+00 1696.8 1159 75.5
CANSAT56G3337 Cannabis sativa HOM05D004297 ORTHO05D005213 0.0e+00 1695.6 1152 76.0
Lj9C586G6 Lonicera japonica HOM05D004297 ORTHO05D005213 0.0e+00 1695.6 1150 76.3
CAN.G78.102 Capsicum annuum HOM05D004297 ORTHO05D005213 0.0e+00 1694.1 1156 75.7
MSTRG.17286 Avicennia marina HOM05D004297 ORTHO05D005213 0.0e+00 1689.5 1150 75.9
FvH4_5g28900 Fragaria vesca HOM05D004297 ORTHO05D005213 0.0e+00 1685.6 1151 75.8
Migut.B01779 Erythranthe guttata HOM05D004297 ORTHO05D005213 0.0e+00 1680.6 1155 74.5
Potri.014G087900 Populus trichocarpa HOM05D004297 ORTHO05D005213 0.0e+00 1679.1 1156 75.5
TAR636G0349 Trochodendron aralioides HOM05D004297 ORTHO05D005213 0.0e+00 1678.3 1079 79.6
FAN18G0188 Fragaria x ananassa HOM05D004297 ORTHO05D005213 0.0e+00 1677.1 1162 75.0
Gohir.D07G146700 Gossypium hirsutum HOM05D004297 ORTHO05D005213 0.0e+00 1675.6 1155 74.9
PSO063G5582 Papaver somniferum HOM05D004297 ORTHO05D005213 0.0e+00 1672.1 1150 74.5
Oeu036598.1 Olea europaea HOM05D004297 ORTHO05D005213 0.0e+00 1670.2 1178 73.5
Potri.002G162000 Populus trichocarpa HOM05D004297 ORTHO05D005213 0.0e+00 1669.8 1156 74.4
Glyma.09G256700 Glycine max HOM05D004297 ORTHO05D005213 0.0e+00 1667.1 1155 74.8
TWI59G0377 Tripterygium wilfordii HOM05D004297 ORTHO05D005213 0.0e+00 1666.4 1152 75.7
Lalb_Chr03g0038271 Lupinus albus HOM05D004297 ORTHO05D005213 0.0e+00 1665.6 1155 74.1
Lj1g0026001 Lotus japonicus HOM05D004297 ORTHO05D005213 0.0e+00 1662.5 1153 74.8
Glyma.18G235800 Glycine max HOM05D004297 ORTHO05D005213 0.0e+00 1661.4 1155 74.5
FAN13G2415 Fragaria x ananassa HOM05D004297 ORTHO05D005213 0.0e+00 1659.4 1162 74.4
VMungo1383G1290 Vigna mungo HOM05D004297 ORTHO05D005213 0.0e+00 1659.0 1155 73.9
Sabra14G0063700 Salix brachista HOM05D004297 ORTHO05D005213 0.0e+00 1649.8 1218 71.3
Nn6g33322 Nelumbo nucifera HOM05D004297 ORTHO05D005213 0.0e+00 1649.4 1145 74.1
arahy.Tifrunner.gnm1.ann1.553FBT Arachis hypogaea HOM05D004297 ORTHO05D005213 0.0e+00 1646.3 1150 74.4
arahy.Tifrunner.gnm1.ann1.0F1BT2 Arachis hypogaea HOM05D004297 ORTHO05D005213 0.0e+00 1645.9 1145 74.7
SalBow3G3037 Salvia bowleyana HOM05D004297 ORTHO05D005213 0.0e+00 1645.6 1158 73.1
Eucgr.E00109 Eucalyptus grandis HOM05D004297 ORTHO05D005213 0.0e+00 1644.8 1152 73.7
Medtr7g078170 Medicago truncatula HOM05D004297 ORTHO05D005213 0.0e+00 1644.8 1156 74.0
TPR.G37786 Trifolium pratense HOM05D004297 ORTHO05D005213 0.0e+00 1641.3 1158 73.8
SGA_v2.0_scaffold78G25411 Striga asiatica HOM05D004297 ORTHO05D005213 0.0e+00 1640.6 1154 73.4
Nitab4.5_0000583g0330 Nicotiana tabacum HOM05D004297 ORTHO05D005213 0.0e+00 1635.9 1225 70.6
Nitab4.5_0006942g0020 Nicotiana tabacum HOM05D004297 ORTHO05D005213 0.0e+00 1635.5 1191 72.3
PGR042G3632 Punica granatum HOM05D004297 ORTHO05D005213 0.0e+00 1632.8 1156 73.2
DCAR_006941 Daucus carota HOM05D004297 ORTHO05D005213 0.0e+00 1621.7 1150 72.4
Peaxi162Scf00020g01027 Petunia axillaris HOM05D004297 ORTHO05D005213 0.0e+00 1621.3 1084 76.9
Hund27256 Selenicereus undatus HOM05D004297 ORTHO05D005213 0.0e+00 1619.4 1150 72.6
MELO3C021189.2 Cucumis melo HOM05D004297 ORTHO05D005213 0.0e+00 1617.4 1152 72.1
HanXRQChr04g0121341 Helianthus annuus HOM05D004297 ORTHO05D005213 0.0e+00 1613.2 1148 72.6
Sed0013986 Sechium edule HOM05D004297 ORTHO05D005213 0.0e+00 1613.2 1146 72.3
CsaV3_6G000810 Cucumis sativus L. HOM05D004297 ORTHO05D005213 0.0e+00 1608.6 1154 71.8
Aqoxy5G04078 Aquilegia oxysepala HOM05D004297 ORTHO05D005213 0.0e+00 1606.7 1155 73.0
Rhsim07G0012700 Rhododendron simsii HOM05D004297 ORTHO05D005213 0.0e+00 1602.4 1344 65.9
Phvul.008G060200 Phaseolus vulgaris HOM05D004297 ORTHO05D005213 0.0e+00 1601.3 1102 75.1
Lsat_1_v5_gn_7_3220 Lactuca sativa HOM05D004297 ORTHO05D005213 0.0e+00 1595.9 1147 72.5
ECA236G0245 Erigeron canadensis HOM05D004297 ORTHO05D005213 0.0e+00 1595.1 1146 72.2
Haze_15540 Corylus avellana HOM05D004297 ORTHO05D005213 0.0e+00 1585.9 1136 73.2
ClCG06G003500 Citrullus lanatus HOM05D004297 ORTHO05D005213 0.0e+00 1573.9 1220 68.0
EL10Ac1g00379 Beta vulgaris HOM05D004297 ORTHO05D005213 0.0e+00 1560.4 1147 70.4
THA.LOC104817308 Tarenaya hassleriana HOM05D004297 ORTHO05D005213 0.0e+00 1557.3 1152 70.3
MD11G1239500 Malus domestica HOM05D004297 ORTHO05D005213 0.0e+00 1548.9 1041 76.4
Thhalv10005756m.g Eutrema salsugineum HOM05D004297 ORTHO05D005213 0.0e+00 1548.1 1152 69.4
Sabra02G0129100 Salix brachista HOM05D004297 ORTHO05D005213 0.0e+00 1541.9 1274 65.7
AL5G43840 Arabidopsis lyrata HOM05D004297 ORTHO05D005213 0.0e+00 1540.4 1148 69.3
Carub.0005s2817 Capsella rubella HOM05D004297 ORTHO05D005213 0.0e+00 1533.1 1150 68.9
AT3G61480 Arabidopsis thaliana HOM05D004297 ORTHO05D005213 0.0e+00 1527.3 1148 69.1
AT5G28350 Arabidopsis thaliana HOM05D004297 ORTHO05D005213 0.0e+00 1526.9 1148 69.0
BolC8t51219H Brassica oleracea HOM05D004297 ORTHO05D005213 0.0e+00 1500.0 1151 68.1
C08p36360 Brassica napus HOM05D004297 ORTHO05D005213 0.0e+00 1496.1 1151 67.9
vmacro13256 Vaccinium macrocarpon HOM05D004297 ORTHO05D005213 0.0e+00 1485.7 1191 68.3
A09p53530 Brassica napus HOM05D004297 ORTHO05D005213 0.0e+00 1477.6 1151 67.3
BraA09t40777Z Brassica rapa HOM05D004297 ORTHO05D005213 0.0e+00 1476.5 1151 67.2
ATR0661G292 Amborella trichopoda HOM05D004297 ORTHO05D005213 0.0e+00 1468.8 1151 66.7
unitig_749.g14347 Utricularia gibba HOM05D004297 ORTHO05D005213 0.0e+00 1461.8 1169 66.0
Ca_00827_v3 Cicer arietinum L. HOM05D000005 ORTHO05D005213 0.0e+00 1448.3 957 77.8
AL5G43780 Arabidopsis lyrata HOM05D004297 ORTHO05D005213 0.0e+00 1433.7 1139 66.5
Aa31LG1G27480 Aethionema arabicum HOM05D004297 ORTHO05D005213 0.0e+00 1426.0 1183 64.1
Os02g0786000 Oryza sativa ssp. japonica HOM05D004297 ORTHO05D005213 0.0e+00 1385.2 1144 63.5
BcaC07g40648 Brassica carinata HOM05D004297 ORTHO05D005213 0.0e+00 1380.9 1148 64.2
Zm00001eb257250 Zea mays HOM05D004297 ORTHO05D005213 0.0e+00 1376.3 1144 63.3
Hma1.2p1_0071F.1_g037770 Hydrangea macrophylla HOM05D004297 ORTHO05D005213 0.0e+00 1370.1 844 82.7
AUR62022597 Chenopodium quinoa HOM05D004297 ORTHO05D005213 0.0e+00 1367.4 1185 63.7
Hma1.2p1_0071F.1_g037780 Hydrangea macrophylla HOM05D004297 ORTHO05D005213 0.0e+00 1363.2 840 82.7
Zm00001eb192800 Zea mays HOM05D004297 ORTHO05D005213 0.0e+00 1362.8 1148 62.4
Sc23g0002720 Simmondsia chinensis HOM05D004297 ORTHO05D005213 0.0e+00 1324.7 894 76.2
Psat3g107280 Pisum sativum HOM05D004297 ORTHO05D005213 0.0e+00 1275.0 1006 68.4
CARHR171820 Cardamine hirsuta HOM05D004297 ORTHO05D005213 0.0e+00 1244.6 887 72.0
Sed0025112 Sechium edule HOM05D004297 ORTHO05D005213 0.0e+00 1157.5 1136 57.1
Sp5g01920 Schrenkiella parvula HOM05D004297 ORTHO05D005213 1.5e-311 1073.2 825 67.4
CiPaw.01G064500 Carya illinoinensis HOM05D004297 ORTHO05D005213 3.3e-310 1068.5 711 78.3
FAN08G3284 Fragaria x ananassa HOM05D004297 ORTHO05D005213 1.1e-308 1063.5 787 70.4
SHI13402 Sapria himalayana HOM05D004297 ORTHO05D005213 2.5e-297 1025.8 1552 41.6
Mapoly0027s0035 Marchantia polymorpha HOM05D004297 ORTHO05D005213 3.2e-276 955.7 1175 45.9
COL.COLO4_12744 Corchorus olitorius HOM05D004297 ORTHO05D005213 1.4e-271 940.3 557 85.8
CSS0030491 Camellia sinensis var. sinensis HOM05D004297 ORTHO05D005213 6.8e-263 911.4 557 82.9
SMO367G0176 Selaginella moellendorffii HOM05D004297 ORTHO05D005213 1.4e-255 887.1 1155 44.6
Pp3c2_4880 Physcomitrium patens HOM05D004297 ORTHO05D005213 1.9e-249 866.7 1173 43.4
MD01G1067900 Malus domestica HOM05D004297 ORTHO05D005213 4.3e-241 839.0 650 68.3
Pp3c14_21590 Physcomitrium patens HOM05D004297 ORTHO05D005213 5.1e-234 815.5 1170 41.5
AUR62004390 Chenopodium quinoa HOM05D004297 ORTHO05D005213 1.6e-227 793.9 709 60.1
CBR_g36279 Chara braunii HOM05D004297 ORTHO05D005213 1.1e-217 761.1 1411 35.1
CDE04G2307 Ceratophyllum demersum HOM05D004297 ORTHO05D005213 6.9e-215 751.9 679 58.6
CDE04G3641 Ceratophyllum demersum HOM05D004297 ORTHO05D005213 2.4e-207 726.9 453 80.8
Psat0ss4650g0200 Pisum sativum HOM05D004297 ORTHO05D005213 3.5e-182 643.3 589 60.4
Oeu039184.1 Olea europaea HOM05D004297 ORTHO05D005213 2.6e-169 600.5 455 68.8
SEGI_29424 Sequoiadendron giganteum HOM05D004297 ORTHO05D000001 1.6e-142 511.5 422 62.3
COL.COLO4_12743 Corchorus olitorius HOM05D004297 ORTHO05D005213 6.6e-141 506.1 450 59.3
AUR62004391 Chenopodium quinoa HOM05D004297 ORTHO05D005213 1.4e-135 488.4 399 68.7
Peaxi162Scf41243g00005 Petunia axillaris HOM05D004297 ORTHO05D005213 7.6e-129 466.1 330 76.1
HPP92_012694 Vanilla planifolia HOM05D004297 ORTHO05D005213 9.3e-127 459.1 591 45.2
Psat7g148560 Pisum sativum HOM05D004297 ORTHO05D005213 1.6e-99 368.6 314 64.6
MCO14G315 Micromonas commoda HOM05D004297 ORTHO05D005213 9.1e-82 309.7 1084 27.5
AagrBONN_evm.TU.Sc2ySwM_344.3195 Anthoceros agrestis HOM05D004297 ORTHO05D005213 2.1e-78 298.5 293 54.3
HPP92_012695 Vanilla planifolia HOM05D004297 ORTHO05D005213 1.0e-77 296.2 189 75.1
HPP92_012670 Vanilla planifolia HOM05D004297 ORTHO05D005213 4.8e-75 287.3 255 63.5
MD01G1068000 Malus domestica HOM05D004297 ORTHO05D005213 1.0e-69 269.6 199 75.4
PRCOL_00000293 Prasinoderma coloniale HOM05D004297 ORTHO05D005213 4.8e-67 260.8 774 28.6
Sc23g0002730 Simmondsia chinensis HOM05D004297 ORTHO05D005213 1.5e-63 249.2 191 63.4
vmacro23481 Vaccinium macrocarpon HOM05D004297 ORTHO05D005213 1.2e-62 246.1 294 50.7
Cre12.g506650 Chlamydomonas reinhardtii HOM05D004297 ORTHO05D005213 4.0e-53 214.5 1155 22.4
BolC6t37919H Brassica oleracea HOM05D004297 ORTHO05D005213 5.2e-53 214.2 215 59.1
Ah.05g180350 Amaranthus hybridus HOM05D004297 ORTHO05D005213 1.2e-52 213.0 206 53.4
Cc02_g24300 Coffea canephora HOM05D004297 ORTHO05D005213 1.2e-52 213.0 189 57.7
BcaC07g42689 Brassica carinata HOM05D004297 ORTHO05D005213 1.1e-50 206.5 186 55.9
C06p27520 Brassica napus HOM05D004297 ORTHO05D005213 1.1e-50 206.5 215 56.3
AagrBONN_evm.TU.Sc2ySwM_344.3204 Anthoceros agrestis HOM05D004297 ORTHO05D005213 7.8e-49 200.3 324 35.8
Lsat_1_v5_gn_9_9281 Lactuca sativa HOM05D004297 ORTHO05D005213 3.6e-46 191.4 329 43.8
SEGI_39496 Sequoiadendron giganteum HOM05D004297 ORTHO05D005213 4.4e-44 184.5 248 43.1
Rhsim06G0128600 Rhododendron simsii HOM05D000263 ORTHO05D000213 7.8e-41 173.7 183 55.2
CSS0029755 Camellia sinensis var. sinensis HOM05D004297 ORTHO05D005213 1.5e-39 169.5 290 42.4
TAR629G3312 Trochodendron aralioides HOM05D004297 ORTHO05D005213 2.4e-34 152.1 90 82.2
MD11G1239400 Malus domestica HOM05D004297 ORTHO05D005213 2.3e-29 135.6 112 66.1
Rhsim06G0126700 Rhododendron simsii HOM05D000263 ORTHO05D000213 1.1e-26 126.7 164 46.3
arahy.Tifrunner.gnm1.ann1.K3XHZI Arachis hypogaea HOM05D004297 ORTHO05D005213 1.2e-25 123.2 111 62.2
SEGI_34049 Sequoiadendron giganteum HOM05D004297 ORTHO05D005213 2.5e-23 115.5 107 61.7
Cpa.g.sc11.39 Carica papaya HOM05D004297 ORTHO05D005213 2.8e-22 112.1 65 81.5
Rhsim12G0103300 Rhododendron simsii HOM05D004297 ORTHO05D339569 2.8e-22 112.1 218 39.4
Cfa026409 Carpinus fangiana HOM05D004297 ORTHO05D005213 1.7e-19 102.8 227 31.3
RcHm_v2.0_Chr1g0356921 Rosa chinensis HOM05D004297 ORTHO05D005213 4.2e-18 98.2 64 75.0
SEGI_01640 Sequoiadendron giganteum HOM05D004297 ORTHO05D005213 2.1e-17 95.9 85 55.3
arahy.Tifrunner.gnm1.ann1.WWIQ7K Arachis hypogaea HOM05D004297 ORTHO05D005213 1.1e-15 90.1 59 76.3
CSS0014634 Camellia sinensis var. sinensis HOM05D004297 ORTHO05D005213 2.5e-15 89.0 118 50.0
VMungo0464G0057 Vigna mungo HOM05D004297 ORTHO05D005213 7.3e-15 87.4 67 64.2
Rhsim06G0128400 Rhododendron simsii HOM05D000263 ORTHO05D000213 1.8e-13 82.8 56 69.6
RcHm_v2.0_Chr1g0356891 Rosa chinensis HOM05D004297 ORTHO05D005213 6.9e-13 80.9 45 77.8
Lsat_1_v5_gn_4_49241 Lactuca sativa HOM05D004297 ORTHO05D005213 2.6e-12 79.0 56 66.1
AT5G28442 Arabidopsis thaliana HOM05D004297 ORTHO05D005213 1.6e-09 69.7 74 50.0
RcHm_v2.0_Chr1g0356911 Rosa chinensis HOM05D004297 ORTHO05D005213 6.0e-09 67.8 34 79.4
arahy.Tifrunner.gnm1.ann1.19V8U8 Arachis hypogaea HOM05D000005 ORTHO05D000012 1.7e-08 66.2 71 50.7
Hma1.2p1_0733F.1_g210090 Hydrangea macrophylla HOM05D004297 ORTHO05D005213 2.5e-07 62.4 54 59.3
Rhsim06G0128800 Rhododendron simsii HOM05D000263 ORTHO05D000213 3.3e-07 62.0 42 69.0
CSS0021987 Camellia sinensis var. sinensis HOM05D004297 ORTHO05D005213 5.6e-07 61.2 78 48.7


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