Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv32450 Davidia involucrata HOM05D001826 ORTHO05D018157 3.5e-138 495.0 256 100.0
CSS0017008 Camellia sinensis var. sinensis HOM05D001826 ORTHO05D004184 2.1e-69 266.5 289 58.5
CSS0031422 Camellia sinensis var. sinensis HOM05D001826 ORTHO05D004184 6.0e-69 265.0 285 57.5
CSS0033058 Camellia sinensis var. sinensis HOM05D001826 ORTHO05D004184 6.0e-69 265.0 289 58.1
Hma1.2p1_0001F.1_g001660 Hydrangea macrophylla HOM05D001826 ORTHO05D004184 2.3e-68 263.1 289 54.7
Actinidia33430 Actinidia chinensis HOM05D001826 ORTHO05D004184 1.9e-62 243.4 281 55.9
Actinidia20930 Actinidia chinensis HOM05D001826 ORTHO05D004184 3.2e-62 242.7 288 53.5
QL08p049532 Quercus lobata HOM05D001826 ORTHO05D004184 2.1e-61 240.0 272 54.8
CiPaw.02G028500 Carya illinoinensis HOM05D001826 ORTHO05D004184 6.6e-60 235.0 265 54.7
vmacro20955 Vaccinium macrocarpon HOM05D001826 ORTHO05D004184 1.8e-57 226.9 286 52.1
TAR375G0082 Trochodendron aralioides HOM05D001826 ORTHO05D004184 4.0e-57 225.7 290 49.7
RhsimUnG0002100 Rhododendron simsii HOM05D001826 ORTHO05D004184 1.2e-56 224.2 284 51.4
CiPaw.01G057800 Carya illinoinensis HOM05D001826 ORTHO05D004184 9.9e-56 221.1 246 54.9
Lj7A516T61 Lonicera japonica HOM05D001826 ORTHO05D004184 1.3e-55 220.7 290 51.0
TAR374G0002 Trochodendron aralioides HOM05D001826 ORTHO05D004184 1.7e-55 220.3 280 51.4
Rhsim07G0018000 Rhododendron simsii HOM05D001826 ORTHO05D004184 8.4e-55 218.0 283 47.7
vmacro13307 Vaccinium macrocarpon HOM05D001826 ORTHO05D004184 8.7e-52 208.0 280 48.6
Prupe.2G162700 Prunus persica HOM05D001826 ORTHO05D004184 4.3e-51 205.7 289 47.1
Nn6g33530 Nelumbo nucifera HOM05D001826 ORTHO05D004184 2.8e-50 203.0 287 45.6
Oeu014675.3 Olea europaea HOM05D001826 ORTHO05D004184 3.6e-50 202.6 280 48.2
Thecc.01G363300 Theobroma cacao HOM05D001826 ORTHO05D004184 8.1e-50 201.4 283 49.5
MD01G1053700 Malus domestica HOM05D001826 ORTHO05D004184 1.8e-49 200.3 288 47.2
MD07G1141400 Malus domestica HOM05D001826 ORTHO05D004184 2.4e-49 199.9 289 47.1
Haze_15465 Corylus avellana HOM05D001826 ORTHO05D004184 2.0e-48 196.8 238 55.5
FvH4_7g13660 Fragaria vesca HOM05D001826 ORTHO05D004184 5.8e-48 195.3 290 47.9
FAN10G1065 Fragaria x ananassa HOM05D001826 ORTHO05D004184 7.6e-48 194.9 290 47.6
CSS0034842 Camellia sinensis var. sinensis HOM05D001826 ORTHO05D004184 2.9e-47 193.0 254 53.1
FAN03G3317 Fragaria x ananassa HOM05D001826 ORTHO05D004184 1.4e-46 190.7 288 47.2
Oeu004525.1 Olea europaea HOM05D001826 ORTHO05D004184 1.4e-46 190.7 284 45.8
FAN01G1586 Fragaria x ananassa HOM05D001826 ORTHO05D004184 3.2e-46 189.5 289 47.4
Duzib138G1216 Durio zibethinus HOM05D001826 ORTHO05D004184 4.2e-46 189.1 283 45.9
Gohir.D12G108900 Gossypium hirsutum HOM05D001826 ORTHO05D004184 1.6e-45 187.2 290 45.5
MSTRG.4866 Avicennia marina HOM05D001826 ORTHO05D004184 3.5e-45 186.0 276 44.2
Gorai.008G118000 Gossypium raimondii HOM05D001826 ORTHO05D004184 4.6e-45 185.7 290 45.5
Lj9C580G11 Lonicera japonica HOM05D001826 ORTHO05D004184 4.6e-45 185.7 281 46.6
Manes.05G037400 Manihot esculenta HOM05D001826 ORTHO05D004184 6.0e-45 185.3 285 44.9
Gohir.A12G105000 Gossypium hirsutum HOM05D001826 ORTHO05D004184 1.0e-44 184.5 292 46.6
CANSAT56G1923 Cannabis sativa HOM05D001826 ORTHO05D004184 1.3e-44 184.1 272 49.6
Ciclev10018563m.g Citrus clementina HOM05D001826 ORTHO05D004184 2.5e-43 179.9 247 48.2
RcHm_v2.0_Chr1g0353741 Rosa chinensis HOM05D001826 ORTHO05D004184 2.8e-42 176.4 289 44.3
DCAR_006915 Daucus carota HOM05D001826 ORTHO05D004184 6.2e-42 175.3 277 45.8
Cpa.g.sc18.224 Carica papaya HOM05D001826 ORTHO05D004184 5.3e-41 172.2 256 47.3
Nitab4.5_0003111g0100 Nicotiana tabacum HOM05D001826 ORTHO05D004184 5.3e-41 172.2 283 44.2
Atru.chr5.450 Acer truncatum HOM05D001826 ORTHO05D004184 6.9e-41 171.8 274 44.9
Nitab4.5_0001620g0100 Nicotiana tabacum HOM05D001826 ORTHO05D004184 1.2e-40 171.0 283 44.2
COL.COLO4_12675 Corchorus olitorius HOM05D001826 ORTHO05D004184 2.0e-40 170.2 271 44.6
MELO3C006129.2 Cucumis melo HOM05D001826 ORTHO05D004184 3.4e-40 169.5 285 44.2
Gorai.001G170200 Gossypium raimondii HOM05D001826 ORTHO05D004184 3.4e-40 169.5 245 46.1
ClCG05G001700 Citrullus lanatus HOM05D001826 ORTHO05D004184 7.6e-40 168.3 285 42.8
SGA_v2.0_scaffold277G46674 Striga asiatica HOM05D001826 ORTHO05D004184 8.4e-39 164.9 280 41.8
Potri.014G080800 Populus trichocarpa HOM05D001826 ORTHO05D004184 1.1e-38 164.5 280 42.5
Duzib133G0016 Durio zibethinus HOM05D001826 ORTHO05D004184 1.4e-38 164.1 282 43.6
Gohir.A08G130000 Gossypium hirsutum HOM05D001826 ORTHO05D004184 1.9e-38 163.7 277 42.6
SalBow3G1103 Salvia bowleyana HOM05D001826 ORTHO05D004184 1.9e-38 163.7 276 40.2
THA.LOC104801451 Tarenaya hassleriana HOM05D001826 ORTHO05D004184 2.4e-38 163.3 283 44.2
Glyma.09G262000 Glycine max HOM05D001826 ORTHO05D004184 7.1e-38 161.8 294 41.8
TWI59G0720 Tripterygium wilfordii HOM05D001826 ORTHO05D004184 9.3e-38 161.4 286 42.3
TWI59G1454 Tripterygium wilfordii HOM05D001826 ORTHO05D004184 9.3e-38 161.4 286 42.3
Sabra14G0058600 Salix brachista HOM05D001826 ORTHO05D004184 1.6e-37 160.6 287 40.8
Gorai.004G157200 Gossypium raimondii HOM05D001826 ORTHO05D004184 2.7e-37 159.8 277 42.2
Gohir.D08G151300 Gossypium hirsutum HOM05D001826 ORTHO05D004184 4.6e-37 159.1 277 41.9
Peaxi162Scf00397g00111 Petunia axillaris HOM05D001826 ORTHO05D004184 4.6e-37 159.1 248 45.2
Ca_07891_v3 Cicer arietinum L. HOM05D001826 ORTHO05D004184 6.0e-37 158.7 285 42.8
Solyc01g094290.3 Solanum lycopersicum HOM05D001826 ORTHO05D004184 6.0e-37 158.7 280 42.9
Sopen01g038090 Solanum pennellii HOM05D001826 ORTHO05D004184 6.0e-37 158.7 280 42.9
TWI23G0863 Tripterygium wilfordii HOM05D001826 ORTHO05D004184 6.0e-37 158.7 279 43.0
CARHR248780 Cardamine hirsuta HOM05D001826 ORTHO05D004184 1.3e-36 157.5 265 44.2
Potri.002G157200 Populus trichocarpa HOM05D001826 ORTHO05D004184 1.3e-36 157.5 295 40.7
Sp1g00500 Schrenkiella parvula HOM05D001826 ORTHO05D004184 1.3e-36 157.5 272 41.2
arahy.Tifrunner.gnm1.ann1.SLD8LW Arachis hypogaea HOM05D001826 ORTHO05D004184 1.8e-36 157.1 284 42.3
ECA240G3725 Erigeron canadensis HOM05D001826 ORTHO05D004184 1.8e-36 157.1 278 41.7
Lj3g0020333 Lotus japonicus HOM05D001826 ORTHO05D004184 2.3e-36 156.8 258 43.4
PGR042G0308 Punica granatum HOM05D001826 ORTHO05D004184 2.3e-36 156.8 284 41.9
Sc18g0003430 Simmondsia chinensis HOM05D001826 ORTHO05D004184 3.0e-36 156.4 236 48.3
Hund16940 Selenicereus undatus HOM05D001826 ORTHO05D004184 3.9e-36 156.0 283 39.9
Aa31LG5G380 Aethionema arabicum HOM05D001826 ORTHO05D004184 5.1e-36 155.6 243 45.7
Cc02_g37680 Coffea canephora HOM05D001826 ORTHO05D004184 5.1e-36 155.6 278 42.1
CsaV3_3G009090 Cucumis sativus L. HOM05D001826 ORTHO05D004184 6.7e-36 155.2 272 43.8
EL10Ac1g00529 Beta vulgaris HOM05D001826 ORTHO05D004184 8.7e-36 154.8 291 38.8
CAN.G78.31 Capsicum annuum HOM05D001826 ORTHO05D004184 8.7e-36 154.8 285 43.2
arahy.Tifrunner.gnm1.ann1.8F4Z70 Arachis hypogaea HOM05D001826 ORTHO05D004184 1.1e-35 154.5 284 42.3
AL6G52810 Arabidopsis lyrata HOM05D001826 ORTHO05D004184 1.5e-35 154.1 254 45.3
MSTRG.20812 Avicennia marina HOM05D001826 ORTHO05D004184 2.5e-35 153.3 275 40.4
Migut.B01724 Erythranthe guttata HOM05D001826 ORTHO05D004184 3.3e-35 152.9 271 43.9
AL1G10550 Arabidopsis lyrata HOM05D001826 ORTHO05D004184 5.6e-35 152.1 264 43.9
AT4G00630 Arabidopsis thaliana HOM05D001826 ORTHO05D004184 5.6e-35 152.1 251 45.0
Aa31LG1G11160 Aethionema arabicum HOM05D001826 ORTHO05D004184 1.6e-34 150.6 268 41.0
TPR.G37729 Trifolium pratense HOM05D001826 ORTHO05D004184 2.1e-34 150.2 255 42.4
Carub.0006s3656 Capsella rubella HOM05D001826 ORTHO05D004184 2.8e-34 149.8 268 43.7
Phvul.008G067800 Phaseolus vulgaris HOM05D001826 ORTHO05D004184 3.7e-34 149.4 248 44.4
SalBow5G0163 Salvia bowleyana HOM05D001826 ORTHO05D004184 3.7e-34 149.4 275 40.7
DCAR_008601 Daucus carota HOM05D001826 ORTHO05D004184 4.8e-34 149.1 281 39.9
SalBow5G2532 Salvia bowleyana HOM05D001826 ORTHO05D004184 4.8e-34 149.1 275 40.7
Sabra02G0124800 Salix brachista HOM05D001826 ORTHO05D004184 1.4e-33 147.5 288 39.9
Sed0024442 Sechium edule HOM05D001826 ORTHO05D004184 2.4e-33 146.7 288 40.3
Sed0005198 Sechium edule HOM05D001826 ORTHO05D004184 3.1e-33 146.4 160 58.1
Ca_23666_v3 Cicer arietinum L. HOM05D001826 ORTHO05D004184 5.3e-33 145.6 230 47.0
Psat3g110880 Pisum sativum HOM05D001826 ORTHO05D004184 6.9e-33 145.2 283 41.7
Lj1g0018622 Lotus japonicus HOM05D001826 ORTHO05D004184 9.0e-33 144.8 268 42.2
Glyma.03G014000 Glycine max HOM05D001826 ORTHO05D004184 1.5e-32 144.1 263 39.9
BraA10t42302Z Brassica rapa HOM05D001826 ORTHO05D004184 2.6e-32 143.3 245 42.9
DCAR_015945 Daucus carota HOM05D001826 ORTHO05D004184 4.5e-32 142.5 265 41.9
TPR.G4440 Trifolium pratense HOM05D001826 ORTHO05D004184 4.5e-32 142.5 247 44.1
Lsat_1_v5_gn_3_136621 Lactuca sativa HOM05D001826 ORTHO05D004184 5.8e-32 142.1 284 39.8
ECA236G3271 Erigeron canadensis HOM05D001826 ORTHO05D004184 7.6e-32 141.7 244 44.3
Thhalv10006595m.g Eutrema salsugineum HOM05D001826 ORTHO05D004184 7.6e-32 141.7 266 41.0
Actinidia12714 Actinidia chinensis HOM05D001826 ORTHO05D004184 9.9e-32 141.4 110 75.5
C05p00270 Brassica napus HOM05D001826 ORTHO05D004184 2.2e-31 140.2 245 41.2
BolC5t28817H Brassica oleracea HOM05D001826 ORTHO05D004184 2.2e-31 140.2 245 41.2
AUR62033325 Chenopodium quinoa HOM05D001826 ORTHO05D004184 2.9e-31 139.8 292 38.0
BcaB03g13614 Brassica carinata HOM05D001826 ORTHO05D018157 3.8e-31 139.4 140 60.0
Eucgr.E00180 Eucalyptus grandis HOM05D001826 ORTHO05D004184 3.8e-31 139.4 283 39.2
HanXRQChr03g0093471 Helianthus annuus HOM05D001826 ORTHO05D004184 3.8e-31 139.4 267 40.4
AUR62004319 Chenopodium quinoa HOM05D001826 ORTHO05D004184 6.4e-31 138.7 293 39.2
DCAR_025143 Daucus carota HOM05D001826 ORTHO05D004184 6.4e-31 138.7 272 41.5
Glyma.07G073700 Glycine max HOM05D001826 ORTHO05D004184 8.4e-31 138.3 266 40.6
AUR62033334 Chenopodium quinoa HOM05D001826 ORTHO05D004184 1.1e-30 137.9 292 37.7
AT1G01790 Arabidopsis thaliana HOM05D001826 ORTHO05D004184 1.9e-30 137.1 272 41.9
Thhalv10006607m.g Eutrema salsugineum HOM05D001826 ORTHO05D004184 1.9e-30 137.1 239 43.1
FAN10G2518 Fragaria x ananassa HOM05D001826 ORTHO05D018157 1.9e-30 137.1 210 47.6
HanXRQChr06g0169881 Helianthus annuus HOM05D001826 ORTHO05D004184 5.5e-30 135.6 239 42.7
arahy.Tifrunner.gnm1.ann1.42EX8Y Arachis hypogaea HOM05D001826 ORTHO05D004184 7.1e-30 135.2 278 38.5
Glyma.18G230100 Glycine max HOM05D001826 ORTHO05D004184 7.1e-30 135.2 258 41.9
PSO063G0747 Papaver somniferum HOM05D001826 ORTHO05D004184 9.3e-30 134.8 258 41.1
Psat4g153760 Pisum sativum HOM05D001826 ORTHO05D004184 1.2e-29 134.4 248 42.3
PSO782G0182 Papaver somniferum HOM05D001826 ORTHO05D004184 2.1e-29 133.7 257 40.5
arahy.Tifrunner.gnm1.ann1.253UZ6 Arachis hypogaea HOM05D001826 ORTHO05D004184 3.5e-29 132.9 277 37.5
Sp1g00490 Schrenkiella parvula HOM05D001826 ORTHO05D004184 3.5e-29 132.9 242 42.6
A10p00260 Brassica napus HOM05D001826 ORTHO05D004184 1.3e-28 131.0 153 52.3
vmacro13312 Vaccinium macrocarpon HOM05D001826 ORTHO05D004184 1.3e-28 131.0 125 63.2
BcaB03g13615 Brassica carinata HOM05D001826 ORTHO05D004184 1.8e-28 130.6 224 42.4
CDE06G2718 Ceratophyllum demersum HOM05D001826 ORTHO05D018157 1.8e-28 130.6 136 55.9
Phvul.010G095600 Phaseolus vulgaris HOM05D001826 ORTHO05D004184 1.8e-28 130.6 256 41.8
CDE04G2063 Ceratophyllum demersum HOM05D001826 ORTHO05D004184 2.3e-28 130.2 136 56.6
Lsat_1_v5_gn_7_5161 Lactuca sativa HOM05D001826 ORTHO05D004184 3.0e-28 129.8 250 41.6
Lalb_Chr19g0127041 Lupinus albus HOM05D001826 ORTHO05D004184 6.7e-28 128.6 285 38.2
Nn1g01434 Nelumbo nucifera HOM05D001826 ORTHO05D018157 1.1e-27 127.9 280 35.7
Lalb_Chr10g0097211 Lupinus albus HOM05D001826 ORTHO05D004184 3.3e-27 126.3 161 52.8
CARHR000530 Cardamine hirsuta HOM05D001826 ORTHO05D004184 4.3e-27 125.9 132 58.3
Medtr8g031550 Medicago truncatula HOM05D001826 ORTHO05D004184 4.3e-27 125.9 124 62.1
Ah.05g176450 Amaranthus hybridus HOM05D001826 ORTHO05D004184 7.4e-27 125.2 291 36.1
BraA09t42264Z Brassica rapa HOM05D001826 ORTHO05D004184 9.6e-27 124.8 127 60.6
VMungo0331G1572 Vigna mungo HOM05D001826 ORTHO05D004184 2.1e-26 123.6 228 40.4
BcaB03g13616 Brassica carinata HOM05D001826 ORTHO05D004184 2.8e-26 123.2 132 57.6
Hund27301 Selenicereus undatus HOM05D001826 ORTHO05D004184 3.7e-26 122.9 286 34.3
Atru.chr10.2376 Acer truncatum HOM05D001826 ORTHO05D018157 8.2e-26 121.7 129 58.1
HanXRQChr13g0426341 Helianthus annuus HOM05D001826 ORTHO05D004184 8.2e-26 121.7 246 39.8
MBI17_g08175_MAGBIO Magnolia biondii HOM05D005566 ORTHO05D004184 1.8e-25 120.6 166 47.6
Phvul.010G095800 Phaseolus vulgaris HOM05D001826 ORTHO05D004184 3.1e-25 119.8 232 41.4
C08p53870 Brassica napus HOM05D001826 ORTHO05D004184 5.3e-25 119.0 114 62.3
BolC8t52901H Brassica oleracea HOM05D001826 ORTHO05D004184 5.3e-25 119.0 114 62.3
Aqoxy5G04023 Aquilegia oxysepala HOM05D001826 ORTHO05D004184 1.2e-24 117.9 235 40.0
HanXRQChr04g0121631 Helianthus annuus HOM05D001826 ORTHO05D004184 1.5e-24 117.5 196 44.4
C05p00260 Brassica napus HOM05D001826 ORTHO05D004184 1.7e-23 114.0 118 59.3
BolC5t28815H Brassica oleracea HOM05D001826 ORTHO05D004184 1.7e-23 114.0 118 59.3
Carub.0001s0042 Capsella rubella HOM05D001826 ORTHO05D004184 2.9e-23 113.2 107 62.6
A10p00230 Brassica napus HOM05D001826 ORTHO05D004184 2.5e-22 110.2 121 57.0
unitig_8.g3808 Utricularia gibba HOM05D001826 ORTHO05D004184 5.5e-22 109.0 265 35.8
ATR0680G345 Amborella trichopoda HOM05D001826 ORTHO05D004184 9.3e-22 108.2 130 50.8
CDE04G1203 Ceratophyllum demersum HOM05D001826 ORTHO05D018157 6.0e-21 105.5 90 64.4
FAN10G2366 Fragaria x ananassa HOM05D001826 ORTHO05D018157 1.0e-20 104.8 285 34.0
Zm00001eb065780 Zea mays HOM05D001826 ORTHO05D004184 5.1e-20 102.4 111 56.8
Zm00001eb433980 Zea mays HOM05D001826 ORTHO05D004184 5.1e-20 102.4 142 45.8
Carub.0006s3629 Capsella rubella HOM05D001826 ORTHO05D114377 5.0e-07 59.3 97 41.2
Mapoly0055s0072 Marchantia polymorpha HOM05D001826 ORTHO05D004184 9.4e-06 55.1 163 30.7


User provided reference genes

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