Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv32422 Davidia involucrata HOM05D006418 ORTHO05D008063 4.9e-176 620.9 295 100.0
CSS0035566 Camellia sinensis var. sinensis HOM05D006418 ORTHO05D008063 1.8e-162 575.9 295 90.5
vmacro13338 Vaccinium macrocarpon HOM05D006418 ORTHO05D008063 9.0e-162 573.5 295 90.8
Hma1.2p1_0033F.1_g020630 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 2.0e-161 572.4 294 90.1
Actinidia38288 Actinidia chinensis HOM05D006418 ORTHO05D008063 4.5e-161 571.2 294 91.2
TAR375G0873 Trochodendron aralioides HOM05D006418 ORTHO05D008063 1.0e-160 570.1 295 89.8
Rhsim07G0021100 Rhododendron simsii HOM05D006418 ORTHO05D008063 2.5e-159 565.5 295 89.8
Lj7A519G38 Lonicera japonica HOM05D006418 ORTHO05D008063 7.2e-159 563.9 295 89.5
Aqoxy5G03975 Aquilegia oxysepala HOM05D006418 ORTHO05D008063 9.4e-159 563.5 294 87.4
Nn1g01350 Nelumbo nucifera HOM05D006418 ORTHO05D008063 1.6e-158 562.8 295 88.1
Ciclev10021113m.g Citrus clementina HOM05D006418 ORTHO05D008063 3.6e-158 561.6 295 88.1
CANSAT56G2190 Cannabis sativa HOM05D006418 ORTHO05D008063 4.6e-158 561.2 295 87.8
Potri.002G153100 Populus trichocarpa HOM05D006418 ORTHO05D008063 6.1e-158 560.8 292 89.0
Lj3g0006580 Lotus japonicus HOM05D006418 ORTHO05D008063 1.8e-157 559.3 295 87.1
GSVIVG01027527001 Vitis vinifera HOM05D006418 ORTHO05D008063 1.8e-157 559.3 291 88.3
ECA236G1148 Erigeron canadensis HOM05D006418 ORTHO05D008063 8.8e-157 557.0 295 86.8
TWI59G1449 Tripterygium wilfordii HOM05D006418 ORTHO05D008063 1.1e-156 556.6 295 87.5
Cfa004182 Carpinus fangiana HOM05D006418 ORTHO05D008063 2.5e-156 555.4 295 86.8
MD07G1128500 Malus domestica HOM05D006418 ORTHO05D008063 3.3e-156 555.1 295 86.1
arahy.Tifrunner.gnm1.ann1.K1NG1D Arachis hypogaea HOM05D006418 ORTHO05D008063 4.3e-156 554.7 295 86.4
FvH4_7g13130 Fragaria vesca HOM05D006418 ORTHO05D008063 4.3e-156 554.7 295 86.4
FAN06G0540 Fragaria x ananassa HOM05D006418 ORTHO05D008063 4.3e-156 554.7 295 86.4
FAN06G3976 Fragaria x ananassa HOM05D006418 ORTHO05D008063 4.3e-156 554.7 295 86.4
Sabra02G0121400 Salix brachista HOM05D006418 ORTHO05D008063 7.4e-156 553.9 292 87.7
FAN01G2003 Fragaria x ananassa HOM05D006418 ORTHO05D008063 9.7e-156 553.5 295 86.1
FAN03G2411 Fragaria x ananassa HOM05D006418 ORTHO05D008063 2.2e-155 552.4 295 86.1
RcHm_v2.0_Chr1g0352261 Rosa chinensis HOM05D006418 ORTHO05D008063 2.2e-155 552.4 295 86.8
FAN10G2923 Fragaria x ananassa HOM05D006418 ORTHO05D008063 2.8e-155 552.0 295 86.1
Nitab4.5_0010430g0060 Nicotiana tabacum HOM05D006418 ORTHO05D008063 8.2e-155 550.4 295 85.8
CiPaw.01G053600 Carya illinoinensis HOM05D006418 ORTHO05D008063 1.1e-154 550.1 295 86.1
Peaxi162Scf00021g00525 Petunia axillaris HOM05D006418 ORTHO05D008063 1.1e-154 550.1 295 87.1
Cc02_g37230 Coffea canephora HOM05D006418 ORTHO05D008063 1.8e-154 549.3 295 85.8
HanXRQChr06g0169031 Helianthus annuus HOM05D006418 ORTHO05D008063 1.8e-154 549.3 295 85.1
DCAR_025170 Daucus carota HOM05D006418 ORTHO05D008063 4.1e-154 548.1 300 86.0
Duzib138G1515 Durio zibethinus HOM05D006418 ORTHO05D008063 5.3e-154 547.7 295 85.4
TPR.G17586 Trifolium pratense HOM05D006418 ORTHO05D008063 9.1e-154 547.0 295 85.1
Eucgr.E00217 Eucalyptus grandis HOM05D006418 ORTHO05D008063 1.2e-153 546.6 295 85.1
Sopen01g037560 Solanum pennellii HOM05D006418 ORTHO05D008063 1.5e-153 546.2 295 85.1
PGSC0003DMG400017054 Solanum tuberosum HOM05D006418 ORTHO05D008063 2.0e-153 545.8 295 85.1
Glyma.03G017600 Glycine max HOM05D006418 ORTHO05D008063 3.4e-153 545.0 295 84.7
THA.LOC104827683 Tarenaya hassleriana HOM05D006418 ORTHO05D008063 4.5e-153 544.7 295 84.7
Solyc01g091780.4 Solanum lycopersicum HOM05D006418 ORTHO05D008063 7.7e-153 543.9 295 84.7
CAN.G170.50 Capsicum annuum HOM05D006418 ORTHO05D008063 1.3e-152 543.1 295 84.4
Gorai.007G095100 Gossypium raimondii HOM05D006418 ORTHO05D008063 1.3e-152 543.1 295 83.7
PGR042G1311 Punica granatum HOM05D006418 ORTHO05D008063 1.7e-152 542.7 295 85.4
Hund27325 Selenicereus undatus HOM05D006418 ORTHO05D008063 3.8e-152 541.6 295 83.1
COL.COLO4_12625 Corchorus olitorius HOM05D006418 ORTHO05D008063 1.1e-151 540.0 295 83.1
Gohir.D11G089100 Gossypium hirsutum HOM05D006418 ORTHO05D008063 1.1e-151 540.0 295 83.4
PSO063G7157 Papaver somniferum HOM05D006418 ORTHO05D008063 1.4e-151 539.7 295 83.4
ClCG05G001910 Citrullus lanatus HOM05D006418 ORTHO05D008063 3.2e-151 538.5 293 83.6
Lalb_Chr10g0097531 Lupinus albus HOM05D006418 ORTHO05D008063 3.2e-151 538.5 295 83.4
Aa31LG10G15180 Aethionema arabicum HOM05D006418 ORTHO05D008063 4.2e-151 538.1 295 83.4
Thhalv10006098m.g Eutrema salsugineum HOM05D006418 ORTHO05D008063 9.4e-151 537.0 295 84.1
EL10Ac1g00963 Beta vulgaris HOM05D006418 ORTHO05D008063 2.7e-150 535.4 293 82.9
CARHR171390 Cardamine hirsuta HOM05D006418 ORTHO05D008063 6.1e-150 534.3 295 83.7
VMungo0331G0376 Vigna mungo HOM05D006418 ORTHO05D008063 2.3e-149 532.3 295 82.7
Migut.B01688 Erythranthe guttata HOM05D006418 ORTHO05D008063 3.9e-149 531.6 295 84.4
Medtr8g032700 Medicago truncatula HOM05D006418 ORTHO05D008063 3.9e-149 531.6 295 83.4
AT3G61080 Arabidopsis thaliana HOM05D006418 ORTHO05D008063 6.7e-149 530.8 295 82.4
Ca_23755_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 6.7e-149 530.8 295 82.7
Nitab4.5_0004550g0130 Nicotiana tabacum HOM05D006418 ORTHO05D008063 8.8e-149 530.4 306 82.4
Carub.0005s2773 Capsella rubella HOM05D006418 ORTHO05D008063 1.1e-148 530.0 295 83.1
AL5G43290 Arabidopsis lyrata HOM05D006418 ORTHO05D008063 2.6e-148 528.9 295 81.7
CiPaw.01G023800 Carya illinoinensis HOM05D006418 ORTHO05D008063 4.8e-147 524.6 297 82.2
Phvul.010G092700 Phaseolus vulgaris HOM05D006418 ORTHO05D008063 1.8e-146 522.7 295 81.4
Sp5g02280 Schrenkiella parvula HOM05D006418 ORTHO05D008063 3.1e-146 521.9 295 81.0
Os03g0117800 Oryza sativa ssp. japonica HOM05D006418 ORTHO05D008063 5.3e-146 521.2 295 80.7
ATR0757G200 Amborella trichopoda HOM05D006418 ORTHO05D008063 2.0e-145 519.2 294 81.3
BcaB02g07390 Brassica carinata HOM05D006418 ORTHO05D008063 2.6e-145 518.8 295 81.4
Zm00001eb001200 Zea mays HOM05D006418 ORTHO05D008063 7.7e-145 517.3 292 80.8
BcaC08g45098 Brassica carinata HOM05D006418 ORTHO05D008063 2.2e-144 515.8 295 81.0
SalBow3G2367 Salvia bowleyana HOM05D006418 ORTHO05D008063 5.0e-144 514.6 295 82.7
A07p25300 Brassica napus HOM05D006418 ORTHO05D008063 1.6e-142 509.6 302 79.5
C06p27060 Brassica napus HOM05D006418 ORTHO05D008063 2.7e-142 508.8 302 79.1
BolC6t37878H Brassica oleracea HOM05D006418 ORTHO05D008063 2.7e-142 508.8 302 79.1
BraA07t30173Z Brassica rapa HOM05D006418 ORTHO05D008063 6.1e-142 507.7 302 78.5
MELO3C006151.2 Cucumis melo HOM05D006418 ORTHO05D008063 1.0e-141 506.9 334 73.1
HPP92_014577 Vanilla planifolia HOM05D006418 ORTHO05D008063 1.4e-141 506.5 292 79.5
Manes.01G262400 Manihot esculenta HOM05D006418 ORTHO05D008063 6.3e-131 471.1 247 88.3
CDE01G0065 Ceratophyllum demersum HOM05D006418 ORTHO05D008063 4.5e-129 464.9 260 82.3
Atru.chr5.403 Acer truncatum HOM05D006418 ORTHO05D008063 1.1e-127 460.3 238 87.4
Lsat_1_v5_gn_7_8501 Lactuca sativa HOM05D006418 ORTHO05D008063 1.5e-127 459.9 263 81.7
Prupe.2G154600 Prunus persica HOM05D006418 ORTHO05D008063 3.2e-127 458.8 241 87.1
SGA_v2.0_scaffold95G28870 Striga asiatica HOM05D006418 ORTHO05D008063 1.6e-126 456.4 306 75.2
CsaV3_3G009310 Cucumis sativus L. HOM05D006418 ORTHO05D008063 3.0e-125 452.2 241 85.5
Thecc.01G368600 Theobroma cacao HOM05D006418 ORTHO05D008063 3.0e-125 452.2 252 82.5
Mapoly0138s0005 Marchantia polymorpha HOM05D006418 ORTHO05D008063 6.8e-125 451.1 292 70.9
Sed0024588 Sechium edule HOM05D006418 ORTHO05D008063 4.8e-123 444.9 241 83.8
Psat4g151800 Pisum sativum HOM05D006418 ORTHO05D008063 1.8e-122 443.0 246 81.3
Oeu024416.1 Olea europaea HOM05D006418 ORTHO05D008063 4.1e-122 441.8 257 82.5
AUR62004291 Chenopodium quinoa HOM05D006418 ORTHO05D008063 7.0e-122 441.0 247 80.6
AagrBONN_evm.TU.Sc2ySwM_344.2134 Anthoceros agrestis HOM05D006418 ORTHO05D008063 1.9e-119 433.0 289 67.8
Pp3c15_5030 Physcomitrium patens HOM05D006418 ORTHO05D008063 1.2e-118 430.3 293 66.6
CBR_g38943 Chara braunii HOM05D006418 ORTHO05D008063 1.5e-116 423.3 286 66.4
SMO356G0133 Selaginella moellendorffii HOM05D006418 ORTHO05D008063 2.0e-113 412.9 291 65.3
QL08p050652 Quercus lobata HOM05D006418 ORTHO05D008063 3.5e-113 412.1 223 85.2
Cpa.g.sc18.197 Carica papaya HOM05D006418 ORTHO05D008063 4.6e-105 385.2 215 81.9
unitig_22.g5367 Utricularia gibba HOM05D006418 ORTHO05D008063 6.6e-104 381.3 204 85.8
Cc02_g37660 Coffea canephora HOM05D006418 ORTHO05D008063 1.4e-101 373.6 208 82.7
Gohir.A11G085000 Gossypium hirsutum HOM05D006418 ORTHO05D008063 2.7e-97 359.4 182 87.9
Hma1.2p1_0033F.1_g020640 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 3.3e-95 352.4 255 70.6
MBI12_g25033_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 4.7e-94 348.6 220 74.5
MCO14G366 Micromonas commoda HOM05D006418 ORTHO05D008063 1.2e-73 280.8 296 49.3
SEGI_14549 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 3.5e-73 279.3 170 74.7
Cre12.g542202 Chlamydomonas reinhardtii HOM05D006418 ORTHO05D008063 1.7e-67 260.4 255 51.0
Sc26g0001060 Simmondsia chinensis HOM05D001335 ORTHO05D001184 4.9e-67 258.8 181 69.6
arahy.Tifrunner.gnm1.ann1.N7AMXP Arachis hypogaea HOM05D006418 ORTHO05D008063 9.0e-61 238.0 133 84.2
Haze_15226 Corylus avellana HOM05D006418 ORTHO05D008063 3.4e-60 236.1 133 82.7
FAN10G0301 Fragaria x ananassa HOM05D006418 ORTHO05D008063 2.1e-57 226.9 174 64.9
PRCOL_00000121 Prasinoderma coloniale HOM05D006418 ORTHO05D008063 2.5e-55 219.9 313 40.9
Pp3c1_6480 Physcomitrium patens HOM05D006418 ORTHO05D008063 4.8e-46 189.1 277 38.3
Glyma.07G078900 Glycine max HOM05D006418 ORTHO05D008063 2.2e-43 180.3 147 63.9
Sc26g0001070 Simmondsia chinensis HOM05D006418 ORTHO05D008063 2.9e-43 179.9 133 67.7
Sabra14G0055300 Salix brachista HOM05D006418 ORTHO05D008063 1.4e-42 177.6 248 43.1
Gohir.A11G084900 Gossypium hirsutum HOM05D006418 ORTHO05D008063 3.7e-38 162.9 95 76.8
Ca_28970_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 1.4e-34 151.0 280 35.4
ATR0620G127 Amborella trichopoda HOM05D006418 ORTHO05D008063 1.1e-29 134.8 157 46.5
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 5.3e-29 132.5 272 32.7
unitig_22.g5366 Utricularia gibba HOM05D003447 ORTHO05D003967 8.5e-19 98.6 58 75.9
Cc00_g22860 Coffea canephora HOM05D006418 ORTHO05D008063 4.0e-16 89.7 57 73.7
CiPaw.01G052800 Carya illinoinensis HOM05D006418 ORTHO05D008063 1.5e-15 87.8 49 75.5
Actinidia27830 Actinidia chinensis HOM05D006418 ORTHO05D008063 7.7e-12 75.5 41 80.5
SEGI_36912 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 1.3e-11 74.7 48 64.6
MBI16_g15528_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 6.5e-11 72.4 42 78.6
MBI11_g05318_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.4e-07 60.1 30 90.0
SEGI_18314 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 2.8e-06 57.0 25 92.0


User provided reference genes

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