Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv32395 Davidia involucrata HOM05D006684 ORTHO05D008443 1.4e-145 519.6 276 100.0
CSS0020305 Camellia sinensis var. sinensis HOM05D006684 ORTHO05D008443 4.2e-76 288.9 241 70.1
TAR636G0929 Trochodendron aralioides HOM05D006684 ORTHO05D008443 4.8e-64 248.8 240 60.4
GSVIVG01027546001 Vitis vinifera HOM05D006684 ORTHO05D008443 2.4e-63 246.5 253 60.5
Hma1.2p1_0053F.1_g030880 Hydrangea macrophylla HOM05D006684 ORTHO05D008443 5.1e-58 228.8 241 56.4
Cfa010232 Carpinus fangiana HOM05D006684 ORTHO05D008443 1.5e-57 227.3 245 56.7
Atru.chr5.338 Acer truncatum HOM05D006684 ORTHO05D008443 2.8e-56 223.0 237 57.4
Ciclev10022036m.g Citrus clementina HOM05D006684 ORTHO05D008443 9.0e-55 218.0 245 55.5
Aqoxy7G00540 Aquilegia oxysepala HOM05D006684 ORTHO05D008443 1.9e-52 210.3 237 54.4
Nitab4.5_0010110g0010 Nicotiana tabacum HOM05D006684 ORTHO05D008443 2.5e-52 209.9 243 55.1
Cc02_g36430 Coffea canephora HOM05D006684 ORTHO05D008443 5.5e-52 208.8 244 50.4
QL08p051764 Quercus lobata HOM05D006684 ORTHO05D008443 7.1e-52 208.4 244 54.1
Cpa.g.sc18.149 Carica papaya HOM05D006684 ORTHO05D008443 1.2e-51 207.6 240 54.6
Sopen05g028070 Solanum pennellii HOM05D006684 ORTHO05D008443 1.8e-50 203.8 239 54.8
Nn6g34351 Nelumbo nucifera HOM05D006684 ORTHO05D008443 8.7e-50 201.4 251 51.4
Prupe.2G148900 Prunus persica HOM05D006684 ORTHO05D008443 8.7e-50 201.4 246 52.8
PGSC0003DMG400021635 Solanum tuberosum HOM05D006684 ORTHO05D008443 1.5e-49 200.7 239 54.0
CiPaw.01G260000 Carya illinoinensis HOM05D006684 ORTHO05D008443 5.7e-49 198.7 243 52.7
Sed0022399 Sechium edule HOM05D006684 ORTHO05D008443 1.8e-47 193.7 243 49.4
ECA240G0119 Erigeron canadensis HOM05D006684 ORTHO05D008443 3.1e-47 193.0 241 52.7
COL.COLO4_12585 Corchorus olitorius HOM05D006684 ORTHO05D008443 4.1e-47 192.6 240 51.7
MELO3C022508.2 Cucumis melo HOM05D006684 ORTHO05D008443 4.1e-47 192.6 242 48.8
TWI59G0969 Tripterygium wilfordii HOM05D006684 ORTHO05D008443 7.7e-46 188.3 242 50.4
SGA_v2.0_scaffold11G05605 Striga asiatica HOM05D006684 ORTHO05D008443 1.4e-44 184.1 243 48.6
LjContig00136g0018410 Lotus japonicus HOM05D006684 ORTHO05D008443 5.5e-44 182.2 242 47.1
MSTRG.4882 Avicennia marina HOM05D006684 ORTHO05D008443 7.2e-44 181.8 243 51.9
Thecc.01G373000 Theobroma cacao HOM05D006684 ORTHO05D008443 1.6e-43 180.6 241 49.4
RcHm_v2.0_Chr1g0351131 Rosa chinensis HOM05D006684 ORTHO05D008443 6.1e-43 178.7 243 49.8
Eucgr.E01357 Eucalyptus grandis HOM05D006684 ORTHO05D008443 1.4e-42 177.6 235 49.8
Hund17005 Selenicereus undatus HOM05D006684 ORTHO05D008443 3.0e-42 176.4 240 50.0
Glyma.09G267200 Glycine max HOM05D006684 ORTHO05D008443 3.9e-42 176.0 242 48.3
MD02G1199700 Malus domestica HOM05D006684 ORTHO05D008443 6.7e-42 175.3 242 48.8
SalBow5G0966 Salvia bowleyana HOM05D006684 ORTHO05D008443 6.7e-42 175.3 244 47.5
Sp4g27550 Schrenkiella parvula HOM05D006684 ORTHO05D008443 8.8e-42 174.9 245 47.8
Gohir.D11G086900 Gossypium hirsutum HOM05D006684 ORTHO05D008443 4.3e-41 172.6 241 46.9
Gorai.007G092800 Gossypium raimondii HOM05D006684 ORTHO05D008443 4.3e-41 172.6 241 46.5
SalBow5G5079 Salvia bowleyana HOM05D006684 ORTHO05D008443 4.3e-41 172.6 244 47.1
PGR042G1390 Punica granatum HOM05D006684 ORTHO05D008443 5.7e-41 172.2 247 48.2
CsaV3_6G006090 Cucumis sativus L. HOM05D006684 ORTHO05D008443 9.7e-41 171.4 242 47.5
FAN01G2432 Fragaria x ananassa HOM05D006684 ORTHO05D008443 9.7e-41 171.4 243 49.4
Thhalv10001611m.g Eutrema salsugineum HOM05D006684 ORTHO05D008443 3.7e-40 169.5 244 47.1
FvH4_7g12340 Fragaria vesca HOM05D006684 ORTHO05D008443 3.7e-40 169.5 243 48.6
FAN06G2821 Fragaria x ananassa HOM05D006684 ORTHO05D008443 3.7e-40 169.5 243 48.6
FAN06G3889 Fragaria x ananassa HOM05D006684 ORTHO05D008443 3.7e-40 169.5 243 48.6
EL10Ac1g00926 Beta vulgaris HOM05D006684 ORTHO05D008443 4.8e-40 169.1 242 49.2
C04p71620 Brassica napus HOM05D000147 ORTHO05D007841 8.2e-40 168.3 239 47.7
HanXRQChr03g0093671 Helianthus annuus HOM05D006684 ORTHO05D008443 1.4e-39 167.5 240 48.3
Gohir.A11G082800 Gossypium hirsutum HOM05D006684 ORTHO05D008443 1.8e-39 167.2 239 46.4
Manes.05G043400 Manihot esculenta HOM05D006684 ORTHO05D008443 2.4e-39 166.8 237 47.7
CANSAT94G0012 Cannabis sativa HOM05D006684 ORTHO05D008443 5.3e-39 165.6 237 46.4
BolC4t28667H Brassica oleracea HOM05D000147 ORTHO05D007841 9.1e-39 164.9 249 46.2
BcaB06g29418 Brassica carinata HOM05D006684 ORTHO05D008443 1.2e-38 164.5 239 47.7
FAN10G0264 Fragaria x ananassa HOM05D006684 ORTHO05D008443 3.4e-38 162.9 243 48.1
VMungo1383G3715 Vigna mungo HOM05D006684 ORTHO05D008443 3.4e-38 162.9 242 46.7
Lalb_Chr03g0039091 Lupinus albus HOM05D006684 ORTHO05D008443 4.5e-38 162.5 240 45.0
vmacro20994 Vaccinium macrocarpon HOM05D006684 ORTHO05D008443 1.0e-37 161.4 357 38.4
BcaC02g07085 Brassica carinata HOM05D006684 ORTHO05D008443 1.7e-37 160.6 241 46.9
Peaxi162Scf00207g00165 Petunia axillaris HOM05D006684 ORTHO05D008443 1.7e-37 160.6 243 47.7
BraA04t18849Z Brassica rapa HOM05D000147 ORTHO05D007841 2.5e-36 156.8 238 45.0
Manes.12G048300 Manihot esculenta HOM05D006684 ORTHO05D008443 4.2e-36 156.0 241 45.2
Potri.014G072400 Populus trichocarpa HOM05D006684 ORTHO05D008443 4.2e-36 156.0 244 46.3
CAN.G333.1 Capsicum annuum HOM05D006684 ORTHO05D008443 5.5e-36 155.6 244 46.3
FAN03G1779 Fragaria x ananassa HOM05D006684 ORTHO05D008443 5.5e-36 155.6 253 45.5
Sc02g0002410 Simmondsia chinensis HOM05D006684 ORTHO05D008443 2.7e-35 153.3 204 47.1
ClCG06G000300 Citrullus lanatus HOM05D006684 ORTHO05D008443 3.6e-35 152.9 291 39.9
FAN10G2097 Fragaria x ananassa HOM05D006684 ORTHO05D008443 4.7e-35 152.5 243 46.9
AL4G44700 Arabidopsis lyrata HOM05D006684 ORTHO05D008443 7.9e-35 151.8 243 44.0
CDE04G1869 Ceratophyllum demersum HOM05D006684 ORTHO05D008443 1.0e-34 151.4 243 47.7
Phvul.008G074700 Phaseolus vulgaris HOM05D006684 ORTHO05D008443 1.0e-34 151.4 240 43.3
Aa31LG1G27020 Aethionema arabicum HOM05D006684 ORTHO05D008443 3.9e-34 149.4 242 45.0
PSO478G1842 Papaver somniferum HOM05D006684 ORTHO05D008443 5.1e-34 149.1 250 44.8
Nitab4.5_0001702g0200 Nicotiana tabacum HOM05D006684 ORTHO05D008443 8.8e-34 148.3 243 44.4
CARHR140710 Cardamine hirsuta HOM05D006684 ORTHO05D008443 1.1e-33 147.9 240 44.2
Lsat_1_v5_gn_3_135520 Lactuca sativa HOM05D006684 ORTHO05D008443 1.5e-33 147.5 240 46.2
Duzib138G0092 Durio zibethinus HOM05D006684 ORTHO05D008443 2.0e-33 147.1 209 48.3
Actinidia33456 Actinidia chinensis HOM05D006684 ORTHO05D008443 2.6e-33 146.7 151 59.6
Medtr7g075640 Medicago truncatula HOM05D006684 ORTHO05D008443 7.4e-33 145.2 241 43.6
Os06g0129800 Oryza sativa ssp. japonica HOM05D006684 ORTHO05D008443 7.4e-33 145.2 243 42.8
Zm00001eb378390 Zea mays HOM05D006684 ORTHO05D008443 9.7e-33 144.8 242 43.0
A04p33890 Brassica napus HOM05D000147 ORTHO05D007841 1.3e-32 144.4 241 43.6
THA.LOC104801995 Tarenaya hassleriana HOM05D006684 ORTHO05D008443 1.7e-32 144.1 239 45.6
arahy.Tifrunner.gnm1.ann1.3Z62KU Arachis hypogaea HOM05D006684 ORTHO05D008443 2.2e-32 143.7 241 41.5
Migut.N01586 Erythranthe guttata HOM05D006684 ORTHO05D008443 3.7e-32 142.9 145 56.6
Solyc05g048750.3 Solanum lycopersicum HOM05D006684 ORTHO05D008443 4.8e-32 142.5 185 51.9
AUR62004244 Chenopodium quinoa HOM05D006684 ORTHO05D008443 2.4e-31 140.2 222 43.7
Rhsim01G0161500 Rhododendron simsii HOM05D006684 ORTHO05D008443 2.4e-31 140.2 113 69.0
Carub.0004s2814 Capsella rubella HOM05D006684 ORTHO05D008443 1.5e-30 137.5 238 42.0
Duzib133G0994 Durio zibethinus HOM05D006684 ORTHO05D008443 2.6e-30 136.7 237 42.2
TPR.G37765 Trifolium pratense HOM05D006684 ORTHO05D008443 2.6e-30 136.7 241 41.9
arahy.Tifrunner.gnm1.ann1.CFQ18P Arachis hypogaea HOM05D006684 ORTHO05D008443 3.5e-30 136.3 241 42.7
BolC4t22271H Brassica oleracea HOM05D006684 ORTHO05D008443 3.5e-30 136.3 238 43.7
AT2G45520 Arabidopsis thaliana HOM05D006684 ORTHO05D008443 3.8e-29 132.9 239 42.7
Manes.12G048301 Manihot esculenta HOM05D006684 ORTHO05D008443 9.4e-28 128.3 235 40.4
ATR0757G101 Amborella trichopoda HOM05D006684 ORTHO05D008443 2.7e-27 126.7 188 47.9
PSO782G3084 Papaver somniferum HOM05D006684 ORTHO05D008443 1.4e-26 124.4 205 44.4
Duzib138G0657 Durio zibethinus HOM05D006684 ORTHO05D008443 1.5e-25 120.9 156 47.4
Manes.12G053501 Manihot esculenta HOM05D006684 ORTHO05D008443 2.6e-25 120.2 235 39.1
AUR62013604 Chenopodium quinoa HOM05D006684 ORTHO05D008443 3.3e-25 119.8 236 39.4
TWI23G1019 Tripterygium wilfordii HOM05D006684 ORTHO05D008443 3.3e-25 119.8 111 60.4
Hma1.2p1_0053F.1_g030890 Hydrangea macrophylla HOM05D006684 ORTHO05D008443 4.4e-25 119.4 168 48.8
BraA05t19524Z Brassica rapa HOM05D006684 ORTHO05D008443 4.1e-23 112.8 232 40.5
Haze_16738 Corylus avellana HOM05D006684 ORTHO05D008443 4.1e-23 112.8 158 50.0
Ah.07g198740 Amaranthus hybridus HOM05D006684 ORTHO05D008443 5.3e-23 112.5 202 39.6
vmacro20995 Vaccinium macrocarpon HOM05D006684 ORTHO05D008443 3.5e-22 109.8 124 55.6
SGA_v2.0_scaffold43G16466 Striga asiatica HOM05D006684 ORTHO05D008443 1.7e-21 107.5 123 50.4
C04p06480 Brassica napus HOM05D000921 ORTHO05D002852 2.2e-21 107.1 152 48.0
Oeu036610.1 Olea europaea HOM05D006684 ORTHO05D008443 2.2e-21 107.1 80 68.8
Psat3g104080 Pisum sativum HOM05D006684 ORTHO05D008443 2.2e-21 107.1 75 68.0
Haze_16739 Corylus avellana HOM05D006684 ORTHO05D008443 2.9e-21 106.7 72 70.8
SEGI_35511 Sequoiadendron giganteum HOM05D006684 ORTHO05D008443 8.5e-21 105.1 261 34.5
Ca_07836_v3 Cicer arietinum L. HOM05D006684 ORTHO05D008443 4.2e-20 102.8 71 67.6
unitig_578.g16483 Utricularia gibba HOM05D006684 ORTHO05D008443 8.0e-19 98.6 246 35.4
MBI12_g38018_MAGBIO Magnolia biondii HOM05D006684 ORTHO05D008443 4.0e-18 96.3 159 45.3
HPP92_020257 Vanilla planifolia HOM05D006684 ORTHO05D008443 7.7e-14 82.0 215 36.7
Pp3c22_10350 Physcomitrium patens HOM05D006684 ORTHO05D008443 1.0e-13 81.6 246 33.3
Zm00001eb269540 Zea mays HOM05D006684 ORTHO05D008443 8.5e-13 78.6 86 53.5
SMO347G0023 Selaginella moellendorffii HOM05D006684 ORTHO05D008443 1.2e-11 74.7 236 34.3
AagrBONN_evm.TU.Sc2ySwM_344.4110 Anthoceros agrestis HOM05D006684 ORTHO05D008443 4.7e-11 72.8 257 33.9
Mapoly0084s0081 Marchantia polymorpha HOM05D006684 ORTHO05D008443 1.3e-08 64.7 245 30.6


User provided reference genes

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