Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv32378 Davidia involucrata HOM05D006036 ORTHO05D007736 6.1e-120 434.1 211 100.0
Oeu037915.1 Olea europaea HOM05D006036 ORTHO05D007736 9.9e-86 320.5 210 74.8
CiPaw.01G261900 Carya illinoinensis HOM05D006036 ORTHO05D007736 4.1e-84 315.1 201 77.6
Nn1g01232 Nelumbo nucifera HOM05D006036 ORTHO05D007736 1.6e-83 313.2 205 76.1
Lj9A569G50 Lonicera japonica HOM05D006036 ORTHO05D007736 2.1e-83 312.8 210 73.3
Cfa001720 Carpinus fangiana HOM05D006036 ORTHO05D007736 1.5e-81 306.6 201 75.1
Actinidia12688 Actinidia chinensis HOM05D006036 ORTHO05D007736 3.3e-81 305.4 201 76.1
Aqoxy7G00627 Aquilegia oxysepala HOM05D006036 ORTHO05D007736 1.2e-80 303.5 200 73.0
MSTRG.4890 Avicennia marina HOM05D006036 ORTHO05D007736 1.6e-80 303.1 210 73.3
DCAR_031531 Daucus carota HOM05D006036 ORTHO05D007736 1.6e-80 303.1 203 73.4
AUR62013628 Chenopodium quinoa HOM05D006036 ORTHO05D007736 2.1e-80 302.8 209 72.7
Haze_16816 Corylus avellana HOM05D006036 ORTHO05D007736 3.6e-80 302.0 201 74.6
SalBow5G3583 Salvia bowleyana HOM05D006036 ORTHO05D007736 4.7e-80 301.6 210 69.5
EL10Ac1g00899 Beta vulgaris HOM05D006036 ORTHO05D007736 8.1e-80 300.8 205 73.2
Cc02_g36690 Coffea canephora HOM05D006036 ORTHO05D007736 1.1e-79 300.4 161 85.7
CsaV3_6G006160 Cucumis sativus L. HOM05D006036 ORTHO05D007736 1.1e-79 300.4 209 70.3
Sed0014119 Sechium edule HOM05D006036 ORTHO05D007736 1.1e-79 300.4 209 69.4
TWI14G1308 Tripterygium wilfordii HOM05D006036 ORTHO05D007736 1.1e-79 300.4 207 73.4
Gohir.A08G134500 Gossypium hirsutum HOM05D006036 ORTHO05D007736 1.4e-79 300.1 204 73.0
Thecc.01G376100 Theobroma cacao HOM05D006036 ORTHO05D007736 1.4e-79 300.1 208 74.0
RcHm_v2.0_Chr1g0350591 Rosa chinensis HOM05D006036 ORTHO05D007736 2.4e-79 299.3 211 72.0
Ah.16g109830 Amaranthus hybridus HOM05D006036 ORTHO05D007736 3.1e-79 298.9 209 72.2
Cpa.g.sc349.4 Carica papaya HOM05D006036 ORTHO05D007736 5.2e-79 298.1 203 74.9
Atru.chr5.310 Acer truncatum HOM05D006036 ORTHO05D007736 6.8e-79 297.7 206 75.2
Duzib133G1287 Durio zibethinus HOM05D006036 ORTHO05D007736 1.2e-78 297.0 207 74.4
FAN10G3538 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.2e-78 297.0 207 72.5
Hund17020 Selenicereus undatus HOM05D006036 ORTHO05D007736 1.2e-78 297.0 213 71.4
SalBow5G0783 Salvia bowleyana HOM05D006036 ORTHO05D007736 2.0e-78 296.2 210 68.6
Sc02g0002580 Simmondsia chinensis HOM05D006036 ORTHO05D007736 2.6e-78 295.8 169 81.7
Sed0006891 Sechium edule HOM05D006036 ORTHO05D007736 5.8e-78 294.7 205 69.8
Glyma.01G142900 Glycine max HOM05D006036 ORTHO05D007736 7.6e-78 294.3 207 72.9
FAN01G0425 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.3e-77 293.5 206 71.8
HanXRQChr16g0520241 Helianthus annuus HOM05D006036 ORTHO05D007736 1.3e-77 293.5 209 69.4
QL08p052466 Quercus lobata HOM05D006036 ORTHO05D007736 1.3e-77 293.5 208 72.6
FAN03G0372 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.7e-77 293.1 207 72.5
Prupe.2G145700 Prunus persica HOM05D006036 ORTHO05D007736 1.7e-77 293.1 205 73.2
FvH4_7g11910 Fragaria vesca HOM05D006036 ORTHO05D007736 4.9e-77 291.6 207 72.5
Glyma.03G023900 Glycine max HOM05D006036 ORTHO05D007736 6.4e-77 291.2 204 73.0
GSVIVG01027612001 Vitis vinifera HOM05D006036 ORTHO05D007736 8.4e-77 290.8 202 72.8
unitig_8.g4983 Utricularia gibba HOM05D006036 ORTHO05D007736 1.4e-76 290.0 203 69.0
MBI04_g35276_MAGBIO Magnolia biondii HOM05D006036 ORTHO05D007736 5.4e-76 288.1 211 69.7
Glyma.14G070200 Glycine max HOM05D006036 ORTHO05D007736 7.1e-76 287.7 204 72.5
Rhsim01G0147400 Rhododendron simsii HOM05D006036 ORTHO05D007736 2.7e-75 285.8 214 71.0
ECA234G4399 Erigeron canadensis HOM05D006036 ORTHO05D007736 3.5e-75 285.4 171 76.0
Lsat_1_v5_gn_4_40940 Lactuca sativa HOM05D006036 ORTHO05D007736 6.0e-75 284.6 217 66.8
ATR0810G113 Amborella trichopoda HOM05D006036 ORTHO05D007736 1.3e-74 283.5 165 80.6
Lalb_Chr07g0189801 Lupinus albus HOM05D006036 ORTHO05D007736 3.9e-74 282.0 201 69.7
Medtr4g023550 Medicago truncatula HOM05D006036 ORTHO05D007736 1.5e-73 280.0 206 69.4
PGR042G0035 Punica granatum HOM05D006036 ORTHO05D007736 1.5e-73 280.0 213 65.7
vmacro21009 Vaccinium macrocarpon HOM05D006036 ORTHO05D007736 1.9e-73 279.6 167 79.6
Psat7g231640 Pisum sativum HOM05D006036 ORTHO05D007736 7.3e-73 277.7 208 67.8
Solyc01g091360.4 Solanum lycopersicum HOM05D006036 ORTHO05D007736 7.3e-73 277.7 169 79.3
Ca_03013_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 9.6e-73 277.3 205 67.3
Eucgr.E01417 Eucalyptus grandis HOM05D006036 ORTHO05D007736 9.6e-73 277.3 179 73.2
Manes.05G045200 Manihot esculenta HOM05D006036 ORTHO05D007736 1.3e-72 276.9 208 67.8
Sopen01g037100 Solanum pennellii HOM05D006036 ORTHO05D007736 2.8e-72 275.8 169 78.1
PGSC0003DMG400012774 Solanum tuberosum HOM05D006036 ORTHO05D007736 4.8e-72 275.0 173 74.6
MD02G1204100 Malus domestica HOM05D006036 ORTHO05D007736 1.1e-71 273.9 206 70.9
CDE02G2016 Ceratophyllum demersum HOM05D006036 ORTHO05D007736 9.0e-71 270.8 158 81.6
TPR.G9852 Trifolium pratense HOM05D006036 ORTHO05D007736 9.0e-71 270.8 163 79.1
Phvul.010G084400 Phaseolus vulgaris HOM05D006036 ORTHO05D007736 1.2e-70 270.4 207 68.1
SEGI_01363 Sequoiadendron giganteum HOM05D006036 ORTHO05D007736 1.5e-70 270.0 183 64.5
CANSAT56G2189 Cannabis sativa HOM05D006036 ORTHO05D007736 2.0e-70 269.6 207 68.1
Sabra02G0117300 Salix brachista HOM05D006036 ORTHO05D007736 9.9e-70 267.3 179 72.6
Lj3g0008791 Lotus japonicus HOM05D006036 ORTHO05D007736 1.7e-69 266.5 207 66.2
Sabra02G0115600 Salix brachista HOM05D006036 ORTHO05D007736 2.9e-69 265.8 179 72.1
Glyma.08G286100 Glycine max HOM05D006036 ORTHO05D007736 6.4e-69 264.6 205 67.3
Potri.002G148400 Populus trichocarpa HOM05D006036 ORTHO05D007736 6.4e-69 264.6 207 64.7
AUR62004220 Chenopodium quinoa HOM05D006036 ORTHO05D007736 8.4e-69 264.2 174 74.7
CSS0011162 Camellia sinensis var. sinensis HOM05D006036 ORTHO05D007736 9.3e-68 260.8 206 68.4
arahy.Tifrunner.gnm1.ann1.B3VI1A Arachis hypogaea HOM05D006036 ORTHO05D007736 7.9e-67 257.7 213 62.4
Ciclev10022362m.g Citrus clementina HOM05D006036 ORTHO05D007736 7.9e-67 257.7 203 68.5
CSS0022013 Camellia sinensis var. sinensis HOM05D006036 ORTHO05D007736 1.0e-66 257.3 207 67.6
Carub.0005s2756 Capsella rubella HOM05D006036 ORTHO05D007736 1.0e-66 257.3 202 68.3
Zm00001eb210410 Zea mays HOM05D006036 ORTHO05D007736 1.0e-66 257.3 163 71.2
CARHR171200 Cardamine hirsuta HOM05D006036 ORTHO05D007736 8.7e-66 254.2 206 67.0
AL5G43130 Arabidopsis lyrata HOM05D006036 ORTHO05D007736 4.3e-65 251.9 204 65.7
A09p53070 Brassica napus HOM05D006036 ORTHO05D007736 9.6e-65 250.8 204 68.1
THA.LOC104802443 Tarenaya hassleriana HOM05D006036 ORTHO05D007736 9.6e-65 250.8 206 64.1
AT3G60810 Arabidopsis thaliana HOM05D006036 ORTHO05D007736 1.3e-64 250.4 206 65.5
Nitab4.5_0005372g0020 Nicotiana tabacum HOM05D006036 ORTHO05D007736 2.8e-64 249.2 212 63.7
Gohir.D08G155400 Gossypium hirsutum HOM05D006036 ORTHO05D007736 3.6e-64 248.8 178 70.2
BcaC07g40602 Brassica carinata HOM05D006036 ORTHO05D007736 4.8e-64 248.4 204 67.6
C08p35770 Brassica napus HOM05D006036 ORTHO05D007736 4.8e-64 248.4 207 65.2
BolC8t51167H Brassica oleracea HOM05D006036 ORTHO05D007736 6.2e-64 248.1 204 67.6
Sp5g02440 Schrenkiella parvula HOM05D006036 ORTHO05D007736 8.1e-64 247.7 202 66.3
BcaC07g42642 Brassica carinata HOM05D006036 ORTHO05D007736 2.4e-63 246.1 204 65.7
Thhalv10006234m.g Eutrema salsugineum HOM05D006036 ORTHO05D007736 2.4e-63 246.1 202 66.8
Aa31LG10G15050 Aethionema arabicum HOM05D006036 ORTHO05D007736 4.0e-63 245.4 202 66.3
Os03g0858700 Oryza sativa ssp. japonica HOM05D006036 ORTHO05D007736 1.2e-62 243.8 161 67.7
FAN10G0738 Fragaria x ananassa HOM05D006036 ORTHO05D007736 2.6e-62 242.7 140 80.7
BraA09t40733Z Brassica rapa HOM05D006036 ORTHO05D007736 3.4e-62 242.3 201 67.2
Medtr7g074920 Medicago truncatula HOM05D006036 ORTHO05D007736 3.2e-60 235.7 170 65.3
vmacro21008 Vaccinium macrocarpon HOM05D006036 ORTHO05D007736 9.3e-60 234.2 137 81.8
SGA_v2.0_scaffold153G37014 Striga asiatica HOM05D006036 ORTHO05D001464 1.6e-59 233.4 227 55.1
AagrBONN_evm.TU.Sc2ySwM_117.1558 Anthoceros agrestis HOM05D006036 ORTHO05D007736 1.8e-58 229.9 156 66.0
Pp3c23_9860 Physcomitrium patens HOM05D006036 ORTHO05D007736 5.1e-58 228.4 161 64.6
Mapoly0007s0216 Marchantia polymorpha HOM05D006036 ORTHO05D007736 1.1e-57 227.3 168 59.5
arahy.Tifrunner.gnm1.ann1.Y8TVDJ Arachis hypogaea HOM05D006036 ORTHO05D007736 4.3e-57 225.3 138 76.8
PSO782G0421 Papaver somniferum HOM05D006036 ORTHO05D007736 1.4e-55 220.3 209 57.4
SMO143G0045 Selaginella moellendorffii HOM05D006036 ORTHO05D007736 9.0e-55 217.6 138 68.8
COL.COLO4_12549 Corchorus olitorius HOM05D006036 ORTHO05D007736 1.3e-53 213.8 169 68.0
PSO478G2400 Papaver somniferum HOM05D006036 ORTHO05D007736 2.2e-53 213.0 213 54.0
Nitab4.5_0000457g0290 Nicotiana tabacum HOM05D006036 ORTHO05D007736 3.8e-53 212.2 213 57.3
VMungo0251G0926 Vigna mungo HOM05D006036 ORTHO05D007736 4.9e-53 211.8 208 57.2
Hma1.2p1_1122F.1_g259290 Hydrangea macrophylla HOM05D006036 ORTHO05D007736 2.5e-52 209.5 157 68.2
VMungo0331G0186 Vigna mungo HOM05D006036 ORTHO05D007736 6.0e-51 204.9 235 52.3
ClCG06G000370 Citrullus lanatus HOM05D006036 ORTHO05D007736 8.7e-50 201.1 207 53.6
Cre11.g468750 Chlamydomonas reinhardtii HOM05D006036 ORTHO05D007736 4.2e-44 182.2 186 49.5
MELO3C035247.2 Cucumis melo HOM05D006036 ORTHO05D007736 6.7e-42 174.9 95 84.2
Peaxi162Scf00021g01720 Petunia axillaris HOM05D006036 ORTHO05D007736 1.4e-39 167.2 95 85.3
Glyma.09G269100 Glycine max HOM05D006036 ORTHO05D007736 6.9e-39 164.9 144 59.7
Migut.N01635 Erythranthe guttata HOM05D006036 ORTHO05D007736 7.7e-38 161.4 135 60.7
Lalb_Chr03g0039561 Lupinus albus HOM05D006036 ORTHO05D007736 2.1e-35 153.3 131 58.8
CAN.G388.12 Capsicum annuum HOM05D006036 ORTHO05D007736 1.0e-34 151.0 95 76.8
FAN06G2896 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.4e-34 150.6 84 83.3
Ca_19909_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 3.7e-32 142.5 101 63.4
FAN06G1700 Fragaria x ananassa HOM05D006036 ORTHO05D007736 8.2e-32 141.4 77 87.0
MELO3C034959.2 Cucumis melo HOM05D006036 ORTHO05D007736 5.9e-30 135.2 113 63.7
MCO13G087 Micromonas commoda HOM05D006036 ORTHO05D007736 1.4e-26 124.0 146 44.5
Gorai.007G091200 Gossypium raimondii HOM05D001611 ORTHO05D001464 3.0e-26 122.9 94 64.9
Ca_07819_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 4.4e-25 119.0 77 72.7
Gohir.D11G085366 Gossypium hirsutum HOM05D001611 ORTHO05D001464 5.7e-25 118.6 94 62.8
CBR_g54966 Chara braunii HOM05D006036 ORTHO05D007736 1.1e-23 114.4 70 74.3
Ciclev10033315m.g Citrus clementina HOM05D006036 ORTHO05D007736 3.8e-21 105.9 128 50.8
Psat3g116040 Pisum sativum HOM05D006036 ORTHO05D007736 4.2e-20 102.4 73 63.0
Gorai.004G161600 Gossypium raimondii HOM05D006036 ORTHO05D007736 3.3e-17 92.8 69 71.0
arahy.Tifrunner.gnm1.ann1.WD24C8 Arachis hypogaea HOM05D006036 ORTHO05D007736 9.7e-17 91.3 62 67.7
arahy.Tifrunner.gnm1.ann1.BW32E7 Arachis hypogaea HOM05D006036 ORTHO05D000587 3.8e-13 79.3 79 50.6
Lalb_Chr03g0039551 Lupinus albus HOM05D006036 ORTHO05D007736 5.0e-13 79.0 64 59.4
Lj1g0011795 Lotus japonicus HOM05D006036 ORTHO05D007736 8.8e-10 68.2 38 78.9


User provided reference genes

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