Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv32364 Davidia involucrata HOM05D006696 ORTHO05D008683 3.9e-153 544.7 256 100.0
Hma1.2p1_0301F.1_g118560 Hydrangea macrophylla HOM05D006696 ORTHO05D008683 3.2e-131 471.9 256 85.2
TWI14G1225 Tripterygium wilfordii HOM05D006696 ORTHO05D008683 1.0e-129 466.8 256 82.8
Rhsim01G0149400 Rhododendron simsii HOM05D006696 ORTHO05D008683 2.3e-129 465.7 256 83.2
Manes.01G267400 Manihot esculenta HOM05D006696 ORTHO05D008683 1.1e-128 463.4 255 82.0
COL.COLO4_24599 Corchorus olitorius HOM05D006696 ORTHO05D008683 3.3e-128 461.8 255 82.4
CSS0014714 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 4.3e-128 461.5 256 82.8
CSS0026641 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 1.3e-127 459.9 256 82.4
Cc02_g24120 Coffea canephora HOM05D006696 ORTHO05D008683 8.2e-127 457.2 256 82.0
Gohir.D13G120600 Gossypium hirsutum HOM05D006696 ORTHO05D008683 2.4e-126 455.7 256 81.6
Gorai.013G134800 Gossypium raimondii HOM05D006696 ORTHO05D008683 2.4e-126 455.7 256 81.6
Ciclev10019231m.g Citrus clementina HOM05D006696 ORTHO05D008683 3.1e-126 455.3 255 81.2
PGSC0003DMG400025962 Solanum tuberosum HOM05D006696 ORTHO05D008683 4.1e-126 454.9 255 82.0
Actinidia33475 Actinidia chinensis HOM05D006696 ORTHO05D008683 5.3e-126 454.5 290 73.8
AUR62004189 Chenopodium quinoa HOM05D006696 ORTHO05D008683 5.3e-126 454.5 256 80.1
CAN.G388.34 Capsicum annuum HOM05D006696 ORTHO05D008683 1.5e-125 453.0 256 80.5
MD07G1119000 Malus domestica HOM05D006696 ORTHO05D008683 3.4e-125 451.8 256 80.5
Potri.002G146100 Populus trichocarpa HOM05D006696 ORTHO05D008683 4.5e-125 451.4 256 79.3
Gohir.A13G117300 Gossypium hirsutum HOM05D006696 ORTHO05D008683 5.9e-125 451.1 256 80.9
Peaxi162Scf00013g03019 Petunia axillaris HOM05D006696 ORTHO05D008683 5.9e-125 451.1 257 80.5
Solyc01g091130.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 2.2e-124 449.1 256 80.5
EL10Ac1g00866 Beta vulgaris HOM05D006696 ORTHO05D008683 5.0e-124 448.0 256 80.1
Hund27369 Selenicereus undatus HOM05D006696 ORTHO05D008683 5.0e-124 448.0 255 80.4
ClCG05G002380 Citrullus lanatus HOM05D006696 ORTHO05D008683 8.5e-124 447.2 256 81.2
HanXRQChr03g0093971 Helianthus annuus HOM05D006696 ORTHO05D008683 1.1e-123 446.8 256 81.2
Lj7C531T6 Lonicera japonica HOM05D006696 ORTHO05D008683 1.1e-123 446.8 255 78.8
Sopen01g036880 Solanum pennellii HOM05D006696 ORTHO05D008683 1.1e-123 446.8 256 79.7
CsaV3_3G009820 Cucumis sativus L. HOM05D006696 ORTHO05D008683 1.4e-123 446.4 256 79.7
AUR62013656 Chenopodium quinoa HOM05D006696 ORTHO05D008683 3.2e-123 445.3 256 79.3
Ah.05g174590 Amaranthus hybridus HOM05D006696 ORTHO05D008683 4.2e-123 444.9 256 78.9
Medtr4g025130 Medicago truncatula HOM05D006696 ORTHO05D008683 5.5e-123 444.5 256 79.3
Eucgr.D02468 Eucalyptus grandis HOM05D006696 ORTHO05D008683 7.2e-123 444.1 255 79.2
DCAR_015916 Daucus carota HOM05D006696 ORTHO05D008683 9.4e-123 443.7 252 79.4
Thecc.08G173400 Theobroma cacao HOM05D006696 ORTHO05D008683 1.6e-122 443.0 255 79.2
Lalb_Chr07g0189961 Lupinus albus HOM05D006696 ORTHO05D008683 2.1e-122 442.6 255 79.2
GSVIVG01027661001 Vitis vinifera HOM05D006696 ORTHO05D008683 2.1e-122 442.6 255 78.8
Atru.chr5.281 Acer truncatum HOM05D006696 ORTHO05D008683 2.7e-122 442.2 255 79.6
Sabra02G0113800 Salix brachista HOM05D006696 ORTHO05D008683 3.6e-122 441.8 256 78.1
Nn6g34076 Nelumbo nucifera HOM05D006696 ORTHO05D008683 6.1e-122 441.0 256 78.1
Prupe.2G142200 Prunus persica HOM05D006696 ORTHO05D008683 7.9e-122 440.7 256 79.7
RcHm_v2.0_Chr1g0349711 Rosa chinensis HOM05D006696 ORTHO05D008683 1.0e-121 440.3 255 80.4
MELO3C006203.2 Cucumis melo HOM05D006696 ORTHO05D008683 1.4e-121 439.9 251 80.1
Duzib177G0277 Durio zibethinus HOM05D006696 ORTHO05D008683 1.4e-121 439.9 255 79.2
Glyma.03G028100 Glycine max HOM05D006696 ORTHO05D008683 1.8e-121 439.5 256 79.3
TPR.G7586 Trifolium pratense HOM05D006696 ORTHO05D008683 2.3e-121 439.1 260 78.1
ECA232G1408 Erigeron canadensis HOM05D006696 ORTHO05D008683 3.0e-121 438.7 255 79.6
Nitab4.5_0000457g0140 Nicotiana tabacum HOM05D006696 ORTHO05D008683 6.7e-121 437.6 286 72.7
Sed0011228 Sechium edule HOM05D006696 ORTHO05D008683 1.1e-120 436.8 256 77.7
Aqoxy7G00691 Aquilegia oxysepala HOM05D006696 ORTHO05D008683 1.5e-120 436.4 256 78.1
FAN01G1519 Fragaria x ananassa HOM05D006696 ORTHO05D008683 3.3e-120 435.3 256 78.1
Ca_19926_v3 Cicer arietinum L. HOM05D006696 ORTHO05D008683 4.4e-120 434.9 262 77.5
MBI12_g20403_MAGBIO Magnolia biondii HOM05D006696 ORTHO05D008683 9.7e-120 433.7 256 78.9
FvH4_7g11430 Fragaria vesca HOM05D006696 ORTHO05D008683 1.3e-119 433.3 256 78.1
TAR629G0060 Trochodendron aralioides HOM05D006696 ORTHO05D008683 1.3e-119 433.3 256 79.3
THA.LOC104814083 Tarenaya hassleriana HOM05D006696 ORTHO05D008683 1.7e-119 433.0 255 77.6
FAN06G3694 Fragaria x ananassa HOM05D006696 ORTHO05D008683 2.2e-119 432.6 256 77.7
VMungo0331G0021 Vigna mungo HOM05D006696 ORTHO05D008683 2.2e-119 432.6 255 77.6
Phvul.010G081400 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 2.8e-119 432.2 255 78.0
CiPaw.01G264000 Carya illinoinensis HOM05D006696 ORTHO05D008683 3.7e-119 431.8 255 77.3
arahy.Tifrunner.gnm1.ann1.30BUB6 Arachis hypogaea HOM05D006696 ORTHO05D008683 6.3e-119 431.0 256 76.2
arahy.Tifrunner.gnm1.ann1.PBYD8I Arachis hypogaea HOM05D006696 ORTHO05D008683 6.3e-119 431.0 256 76.2
FAN03G1153 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.4e-118 429.9 252 78.2
FAN06G1977 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.4e-118 429.9 256 77.7
vmacro21023 Vaccinium macrocarpon HOM05D006696 ORTHO05D008683 1.4e-118 429.9 341 63.0
Aa31LG1G11340 Aethionema arabicum HOM05D006696 ORTHO05D008683 2.4e-118 429.1 256 76.2
Nitab4.5_0010616g0010 Nicotiana tabacum HOM05D006696 ORTHO05D008683 2.4e-118 429.1 297 69.4
Lsat_1_v5_gn_3_132380 Lactuca sativa HOM05D006696 ORTHO05D008683 2.0e-117 426.0 251 78.1
Psat7g231000 Pisum sativum HOM05D006696 ORTHO05D008683 2.0e-117 426.0 255 78.8
MSTRG.20736 Avicennia marina HOM05D006696 ORTHO05D008683 2.6e-117 425.6 254 76.4
Migut.B01614 Erythranthe guttata HOM05D006696 ORTHO05D008683 2.6e-117 425.6 253 76.3
Sp1g37340 Schrenkiella parvula HOM05D006696 ORTHO05D008683 7.7e-117 424.1 253 75.9
BcaB07g33486 Brassica carinata HOM05D006696 ORTHO05D008683 1.9e-115 419.5 253 75.1
QL08p052869 Quercus lobata HOM05D006696 ORTHO05D008683 1.9e-115 419.5 260 74.6
Carub.0001s0021 Capsella rubella HOM05D006696 ORTHO05D008683 3.2e-115 418.7 248 75.0
Haze_16792 Corylus avellana HOM05D006696 ORTHO05D008683 7.2e-115 417.5 254 76.0
BcaC08g43220 Brassica carinata HOM05D006696 ORTHO05D008683 8.0e-114 414.1 254 74.8
BolC6t35679H Brassica oleracea HOM05D006696 ORTHO05D008683 8.0e-114 414.1 254 74.8
AL1G10260 Arabidopsis lyrata HOM05D006696 ORTHO05D008683 1.0e-113 413.7 249 74.7
SGA_v2.0_scaffold95G28911 Striga asiatica HOM05D006696 ORTHO05D008683 1.4e-113 413.3 254 76.4
unitig_22.g5383 Utricularia gibba HOM05D006696 ORTHO05D008683 1.8e-113 412.9 257 73.9
PSO782G1103 Papaver somniferum HOM05D006696 ORTHO05D008683 3.0e-113 412.1 255 75.7
C06p05680 Brassica napus HOM05D006696 ORTHO05D008683 3.9e-113 411.8 254 74.4
A06p03080 Brassica napus HOM05D006696 ORTHO05D008683 2.8e-111 405.6 253 73.9
HPP92_022287 Vanilla planifolia HOM05D006696 ORTHO05D008683 6.3e-111 404.4 256 73.4
PSO478G1798 Papaver somniferum HOM05D006696 ORTHO05D008683 1.1e-110 403.7 255 73.7
BraA06t23521Z Brassica rapa HOM05D006696 ORTHO05D008683 2.4e-110 402.5 253 73.5
CDE04G1815 Ceratophyllum demersum HOM05D006696 ORTHO05D008683 5.9e-109 397.9 256 72.3
Os10g0190800 Oryza sativa ssp. japonica HOM05D006696 ORTHO05D008683 1.0e-108 397.1 256 71.1
AT1G02020 Arabidopsis thaliana HOM05D006696 ORTHO05D008683 6.5e-108 394.4 243 73.7
Zm00001eb145800 Zea mays HOM05D006696 ORTHO05D008683 4.2e-107 391.7 256 68.8
Thhalv10007140m.g Eutrema salsugineum HOM05D006696 ORTHO05D008683 8.0e-106 387.5 252 71.0
ATR0041G020 Amborella trichopoda HOM05D006696 ORTHO05D008683 5.7e-104 381.3 255 68.6
Cpa.g.sc611.2 Carica papaya HOM05D006696 ORTHO05D008683 6.5e-100 367.9 212 78.3
CANSAT21G0759 Cannabis sativa HOM05D006696 ORTHO05D008683 2.1e-98 362.8 210 79.5
Lj3g0014279 Lotus japonicus HOM05D006696 ORTHO05D008683 3.6e-98 362.1 213 77.0
Sc26g0001290 Simmondsia chinensis HOM05D006696 ORTHO05D008683 1.8e-97 359.8 212 77.4
SalBow5G3816 Salvia bowleyana HOM05D006696 ORTHO05D008683 3.4e-96 355.5 210 77.6
AagrBONN_evm.TU.Sc2ySwM_228.1723 Anthoceros agrestis HOM05D006696 ORTHO05D008683 9.8e-88 327.4 240 62.5
SMO011G0006 Selaginella moellendorffii HOM05D006696 ORTHO05D008683 2.0e-85 319.7 237 63.7
SEGI_31859 Sequoiadendron giganteum HOM05D006696 ORTHO05D008683 2.8e-82 309.3 217 65.0
Mapoly0117s0009 Marchantia polymorpha HOM05D006696 ORTHO05D008683 8.9e-81 304.3 245 58.4
Solyc01g091140.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 1.2e-80 303.9 255 60.8
Pp3c18_8320 Physcomitrium patens HOM05D006696 ORTHO05D008683 4.9e-79 298.5 242 57.4
CARHR000330 Cardamine hirsuta HOM05D006696 ORTHO05D008683 1.7e-55 220.3 147 66.0
CARHR000320 Cardamine hirsuta HOM05D006696 ORTHO05D008683 6.9e-49 198.4 107 83.2
VMungo0720G2385 Vigna mungo HOM05D006696 ORTHO05D008683 2.8e-26 123.2 65 83.1
Sopen01g036890 Solanum pennellii HOM05D006696 ORTHO05D008683 1.1e-25 121.3 80 72.5
VMungo1309G0520 Vigna mungo HOM05D006696 ORTHO05D008683 4.5e-24 115.9 65 80.0
SGA_v2.0_scaffold581G53050 Striga asiatica HOM05D006696 ORTHO05D008683 4.8e-18 95.9 72 63.9
Cpa.g.sc14.75 Carica papaya HOM05D006696 ORTHO05D008683 2.7e-13 80.1 37 94.6
SalBow5G1567 Salvia bowleyana HOM05D006696 ORTHO05D008683 1.0e-12 78.2 43 81.4
Atru.chr4.903 Acer truncatum HOM05D006696 ORTHO05D030753 1.3e-10 71.2 39 79.5


User provided reference genes

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