Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv32261 Davidia involucrata HOM05D004997 ORTHO05D005921 6.2e-62 240.7 131 100.0
CSS0020008 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 2.4e-58 228.8 131 93.9
TWI38G0351 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 5.4e-58 227.6 131 93.1
Solyc08g016420.3 Solanum lycopersicum HOM05D004997 ORTHO05D005921 2.1e-57 225.7 131 90.8
Actinidia07691 Actinidia chinensis HOM05D004997 ORTHO05D005921 3.5e-57 224.9 131 92.4
Eucgr.E02397 Eucalyptus grandis HOM05D004997 ORTHO05D005921 6.0e-57 224.2 131 91.6
Sopen08g006800 Solanum pennellii HOM05D004997 ORTHO05D005921 7.8e-57 223.8 131 90.1
TAR626G0896 Trochodendron aralioides HOM05D004997 ORTHO05D005921 1.7e-56 222.6 131 90.8
Potri.004G131900 Populus trichocarpa HOM05D004997 ORTHO05D005921 2.3e-56 222.2 131 91.6
PSO339G4484 Papaver somniferum HOM05D004997 ORTHO05D005921 5.1e-56 221.1 131 90.8
CANSAT35G1260 Cannabis sativa HOM05D004997 ORTHO05D005921 6.6e-56 220.7 129 91.5
Lj5g0010316 Lotus japonicus HOM05D004997 ORTHO05D005921 8.6e-56 220.3 129 90.7
Cfa000953 Carpinus fangiana HOM05D004997 ORTHO05D005921 1.1e-55 219.9 131 90.8
Lalb_Chr05g0222161 Lupinus albus HOM05D004997 ORTHO05D005921 1.1e-55 219.9 127 92.1
PSO384G3576 Papaver somniferum HOM05D004997 ORTHO05D005921 1.5e-55 219.5 131 90.1
VMungo0251G3606 Vigna mungo HOM05D004997 ORTHO05D005921 1.5e-55 219.5 129 91.5
CiPaw.10G092400 Carya illinoinensis HOM05D004997 ORTHO05D005921 1.9e-55 219.2 131 89.3
Ciclev10017164m.g Citrus clementina HOM05D004997 ORTHO05D005921 1.9e-55 219.2 131 90.8
Lj4g0009583 Lotus japonicus HOM05D004997 ORTHO05D005921 1.9e-55 219.2 129 89.9
Medtr5g055650 Medicago truncatula HOM05D004997 ORTHO05D005921 1.9e-55 219.2 129 89.9
Glyma.12G006600 Glycine max HOM05D004997 ORTHO05D005921 2.5e-55 218.8 129 90.7
TWI38G1166 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 2.5e-55 218.8 131 91.6
Gohir.A10G040300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 3.3e-55 218.4 129 90.7
Glyma.08G046600 Glycine max HOM05D004997 ORTHO05D005921 5.6e-55 217.6 129 89.9
Thecc.06G151500 Theobroma cacao HOM05D004997 ORTHO05D005921 5.6e-55 217.6 129 91.5
Phvul.002G321900 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 7.3e-55 217.2 129 89.1
Gohir.D05G151300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 9.5e-55 216.9 129 90.7
Gorai.009G155300 Gossypium raimondii HOM05D004997 ORTHO05D005921 9.5e-55 216.9 129 90.7
SGA_v2.0_scaffold1G00167 Striga asiatica HOM05D004997 ORTHO05D005921 9.5e-55 216.9 126 91.3
MSTRG.7483 Avicennia marina HOM05D004997 ORTHO05D005921 1.2e-54 216.5 126 92.1
CiPaw.09G124400 Carya illinoinensis HOM05D004997 ORTHO05D005921 1.2e-54 216.5 131 87.8
Nn4g24866 Nelumbo nucifera HOM05D004997 ORTHO05D005921 1.2e-54 216.5 131 87.8
Psat2g084800 Pisum sativum HOM05D004997 ORTHO05D005921 1.2e-54 216.5 129 89.1
THA.LOC104814295 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 1.2e-54 216.5 131 87.8
MSTRG.16239 Avicennia marina HOM05D004997 ORTHO05D005921 1.6e-54 216.1 126 90.5
MELO3C002717.2 Cucumis melo HOM05D004997 ORTHO05D005921 1.6e-54 216.1 131 88.5
RcHm_v2.0_Chr5g0013981 Rosa chinensis HOM05D004997 ORTHO05D005921 1.6e-54 216.1 131 88.5
Sed0005528 Sechium edule HOM05D004997 ORTHO05D005921 1.6e-54 216.1 131 89.3
Duzib192G0549 Durio zibethinus HOM05D004997 ORTHO05D005921 2.1e-54 215.7 130 91.5
Gorai.011G043400 Gossypium raimondii HOM05D004997 ORTHO05D005921 2.1e-54 215.7 129 89.9
ECA233G0220 Erigeron canadensis HOM05D004997 ORTHO05D005921 2.8e-54 215.3 129 89.1
CARHR029400 Cardamine hirsuta HOM05D004997 ORTHO05D005921 3.6e-54 214.9 131 87.0
Migut.M00914 Erythranthe guttata HOM05D004997 ORTHO05D005921 3.6e-54 214.9 126 90.5
MD05G1284500 Malus domestica HOM05D004997 ORTHO05D005921 3.6e-54 214.9 131 88.5
Gohir.A05G148700 Gossypium hirsutum HOM05D004997 ORTHO05D005921 4.7e-54 214.5 129 90.7
THA.LOC104812669 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 4.7e-54 214.5 131 87.0
Sed0006544 Sechium edule HOM05D004997 ORTHO05D005921 8.1e-54 213.8 131 87.8
Carub.0001s2824 Capsella rubella HOM05D004997 ORTHO05D005921 1.1e-53 213.4 131 84.7
unitig_32.g11442 Utricularia gibba HOM05D004997 ORTHO05D005921 1.4e-53 213.0 126 89.7
MD10G1262900 Malus domestica HOM05D004997 ORTHO05D005921 1.8e-53 212.6 131 87.0
FAN11G3072 Fragaria x ananassa HOM05D004997 ORTHO05D005921 2.3e-53 212.2 129 88.4
Prupe.4G079900 Prunus persica HOM05D004997 ORTHO05D005921 2.3e-53 212.2 131 87.0
FAN21G2809 Fragaria x ananassa HOM05D004997 ORTHO05D005921 3.1e-53 211.8 131 87.0
HanXRQChr11g0340951 Helianthus annuus HOM05D004997 ORTHO05D005921 5.2e-53 211.1 126 88.9
AL1G43880 Arabidopsis lyrata HOM05D004997 ORTHO05D005921 6.8e-53 210.7 131 83.2
FvH4_3g05660 Fragaria vesca HOM05D004997 ORTHO05D005921 6.8e-53 210.7 129 87.6
Gohir.D10G041200 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.2e-52 209.9 129 88.4
SGA_v2.0_scaffold333G48998 Striga asiatica HOM05D004997 ORTHO05D005921 2.6e-52 208.8 139 83.5
Aqoxy3G00593 Aquilegia oxysepala HOM05D004997 ORTHO05D005921 3.4e-52 208.4 129 85.3
arahy.Tifrunner.gnm1.ann1.06CE9J Arachis hypogaea HOM05D004997 ORTHO05D005921 4.4e-52 208.0 136 83.8
GSVIVG01021444001 Vitis vinifera HOM05D004997 ORTHO05D005921 4.4e-52 208.0 125 88.0
Gorai.002G185400 Gossypium raimondii HOM05D004997 ORTHO05D005921 5.8e-52 207.6 129 88.4
Sp1g25870 Schrenkiella parvula HOM05D004997 ORTHO05D005921 5.8e-52 207.6 131 84.0
AT1G29990 Arabidopsis thaliana HOM05D004997 ORTHO05D005921 2.9e-51 205.3 129 82.2
HanXRQChr01g0020611 Helianthus annuus HOM05D004997 ORTHO05D005921 4.9e-51 204.5 129 86.8
BcaB07g32600 Brassica carinata HOM05D004997 ORTHO05D005921 1.4e-50 203.0 131 80.9
A09p36530 Brassica napus HOM05D004997 ORTHO05D005921 1.4e-50 203.0 131 80.9
BraA09t39174Z Brassica rapa HOM05D004997 ORTHO05D005921 1.4e-50 203.0 131 80.9
BcaC06g35482 Brassica carinata HOM05D004997 ORTHO05D005921 2.4e-50 202.2 129 82.2
BolC7t42045H Brassica oleracea HOM05D004997 ORTHO05D005921 2.4e-50 202.2 129 82.2
CDE02G0055 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 3.2e-50 201.8 129 82.2
Thhalv10009093m.g Eutrema salsugineum HOM05D004997 ORTHO05D005921 4.1e-50 201.4 131 81.7
HPP92_006252 Vanilla planifolia HOM05D004997 ORTHO05D005921 4.1e-50 201.4 131 80.2
C05p28750 Brassica napus HOM05D004997 ORTHO05D005921 5.4e-50 201.1 131 80.2
BolC5t31593H Brassica oleracea HOM05D004997 ORTHO05D005921 5.4e-50 201.1 131 80.2
Manes.11G058500 Manihot esculenta HOM05D004997 ORTHO05D005921 1.2e-49 199.9 113 92.0
Atru.chr10.1243 Acer truncatum HOM05D004997 ORTHO05D005921 1.6e-49 199.5 122 88.5
CDE09G0791 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 3.5e-49 198.4 129 80.6
PGR042G1500 Punica granatum HOM05D004997 ORTHO05D005921 4.6e-49 198.0 131 81.7
ClCG03G007080 Citrullus lanatus HOM05D004997 ORTHO05D005921 3.9e-48 194.9 186 63.4
FAN25G0101 Fragaria x ananassa HOM05D004997 ORTHO05D005921 3.9e-48 194.9 144 76.4
BcaB03g13847 Brassica carinata HOM05D004997 ORTHO05D005921 6.6e-48 194.1 129 81.4
TPR.G13287 Trifolium pratense HOM05D004997 ORTHO05D005921 1.9e-47 192.6 113 89.4
Gohir.D01G100600 Gossypium hirsutum HOM05D004997 ORTHO05D005921 7.3e-47 190.7 120 87.5
Duzib235G0692 Durio zibethinus HOM05D004997 ORTHO05D005921 1.6e-46 189.5 110 91.8
CsaV3_1G032650 Cucumis sativus L. HOM05D004997 ORTHO05D005921 4.7e-46 188.0 113 87.6
Gorai.002G125400 Gossypium raimondii HOM05D004997 ORTHO05D005921 6.2e-46 187.6 120 85.8
A07p10100 Brassica napus HOM05D004997 ORTHO05D005921 1.1e-45 186.8 133 78.2
Ah.09g232610 Amaranthus hybridus HOM05D000413 ORTHO05D000292 2.4e-45 185.7 111 85.6
CAN.G134.135 Capsicum annuum HOM05D004997 ORTHO05D000105 2.4e-45 185.7 111 86.5
Lsat_1_v5_gn_1_91801 Lactuca sativa HOM05D004997 ORTHO05D005921 5.2e-45 184.5 106 91.5
CSS0046404 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 1.2e-44 183.3 105 93.3
SEGI_33388 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 1.2e-44 183.3 129 74.4
Rhsim13G0211800 Rhododendron simsii HOM05D004997 ORTHO05D005921 4.4e-44 181.4 104 93.3
CAN.G134.136 Capsicum annuum HOM05D004997 ORTHO05D005921 5.8e-44 181.0 111 84.7
Hund21531 Selenicereus undatus HOM05D004997 ORTHO05D005921 5.8e-44 181.0 107 86.9
MBI07_g26358_MAGBIO Magnolia biondii HOM05D004997 ORTHO05D005921 7.6e-44 180.6 108 87.0
Os02g0246300 Oryza sativa ssp. japonica HOM05D004997 ORTHO05D005921 7.6e-44 180.6 120 75.8
arahy.Tifrunner.gnm1.ann1.FF119L Arachis hypogaea HOM05D004997 ORTHO05D005921 9.9e-44 180.3 117 82.9
DCAR_027919 Daucus carota HOM05D000413 ORTHO05D000292 1.7e-43 179.5 122 82.0
BcaC05g27010 Brassica carinata HOM05D004997 ORTHO05D005921 1.4e-42 176.4 113 80.5
QL05p058391 Quercus lobata HOM05D004997 ORTHO05D005921 1.4e-42 176.4 129 76.7
Prupe.3G104900 Prunus persica HOM05D004997 ORTHO05D005921 2.4e-42 175.6 105 88.6
Cc02_g37190 Coffea canephora HOM05D004997 ORTHO05D005921 3.2e-42 175.3 131 75.6
BraA07t28803Z Brassica rapa HOM05D004997 ORTHO05D005921 1.3e-40 169.9 118 77.1
FAN16G0953 Fragaria x ananassa HOM05D004997 ORTHO05D005921 1.7e-40 169.5 105 83.8
ATR0743G157 Amborella trichopoda HOM05D004997 ORTHO05D005921 8.7e-40 167.2 110 80.0
Aa31LG6G5670 Aethionema arabicum HOM05D004997 ORTHO05D005921 1.1e-39 166.8 133 71.4
EL10Ac8g19712 Beta vulgaris HOM05D004997 ORTHO05D005921 3.3e-39 165.2 162 59.9
Oeu034156.1 Olea europaea HOM05D004997 ORTHO05D005921 3.3e-39 165.2 92 93.5
Pp3c22_1770 Physcomitrium patens HOM05D004997 ORTHO05D005921 9.6e-39 163.7 124 65.3
PGSC0003DMG400009647 Solanum tuberosum HOM05D004997 ORTHO05D005921 1.3e-38 163.3 92 92.4
Oeu052376.1 Olea europaea HOM05D004997 ORTHO05D005921 1.6e-38 162.9 92 91.3
Mapoly0006s0079 Marchantia polymorpha HOM05D004997 ORTHO05D005921 8.1e-38 160.6 126 65.1
C07p15580 Brassica napus HOM05D004997 ORTHO05D005921 1.8e-37 159.5 118 73.7
Sc17g0004940 Simmondsia chinensis HOM05D004997 ORTHO05D005921 2.4e-37 159.1 92 88.0
Dinv30737 Davidia involucrata HOM05D004997 ORTHO05D005921 3.1e-37 158.7 92 91.3
vmacro04021 Vaccinium macrocarpon HOM05D004997 ORTHO05D005921 3.1e-37 158.7 87 93.1
arahy.Tifrunner.gnm1.ann1.7IX92P Arachis hypogaea HOM05D004997 ORTHO05D005921 5.3e-37 157.9 89 91.0
AagrBONN_evm.TU.Sc2ySwM_344.2433 Anthoceros agrestis HOM05D004997 ORTHO05D005921 6.9e-37 157.5 131 61.1
COL.COLO4_31081 Corchorus olitorius HOM05D004997 ORTHO05D005921 1.2e-36 156.8 87 92.0
QL06p022817 Quercus lobata HOM05D004997 ORTHO05D005921 1.5e-36 156.4 117 75.2
Zm00001eb238610 Zea mays HOM05D004997 ORTHO05D005921 2.6e-36 155.6 120 70.0
AUR62039776 Chenopodium quinoa HOM05D004997 ORTHO05D005921 2.2e-35 152.5 84 91.7
CAN.G3523.1 Capsicum annuum HOM05D004997 ORTHO05D005921 2.9e-35 152.1 92 85.9
CAN.G134.137 Capsicum annuum HOM05D004997 ORTHO05D005921 6.4e-35 151.0 95 83.2
Phvul.009G128800 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 8.4e-35 150.6 87 92.0
Actinidia39569 Actinidia chinensis HOM05D004997 ORTHO05D005921 1.9e-34 149.4 131 69.5
SMO367G0874 Selaginella moellendorffii HOM05D004997 ORTHO05D005921 3.2e-34 148.7 110 66.4
Peaxi162Scf01211g00142 Petunia axillaris HOM05D004997 ORTHO05D005921 7.1e-34 147.5 88 88.6
SEGI_19850 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 5.6e-31 137.9 90 78.9
SalBow8G3614 Salvia bowleyana HOM05D004997 ORTHO05D005921 1.6e-30 136.3 101 75.2
Gohir.D01G149300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 2.1e-30 136.0 95 80.0
Lsat_1_v5_gn_5_30841 Lactuca sativa HOM05D004997 ORTHO05D005921 2.2e-27 125.9 71 90.1
Nitab4.5_0000348g0240 Nicotiana tabacum HOM05D004997 ORTHO05D005921 1.4e-26 123.2 92 73.9
Nitab4.5_0010327g0020 Nicotiana tabacum HOM05D004997 ORTHO05D005921 1.4e-26 123.2 92 73.9
CDE02G2003 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 1.6e-25 119.8 88 75.0
Haze_05586 Corylus avellana HOM05D004997 ORTHO05D005921 2.3e-24 115.9 199 43.7
AUR62030207 Chenopodium quinoa HOM05D004997 ORTHO05D005921 4.3e-23 111.7 61 93.4
Sabra04G0085700 Salix brachista HOM05D004997 ORTHO05D005921 7.4e-23 110.9 63 88.9
Manes.09G021201 Manihot esculenta HOM05D004997 ORTHO05D005921 3.7e-22 108.6 111 60.4
PRCOL_00000028 Prasinoderma coloniale HOM05D004997 ORTHO05D005921 1.5e-20 103.2 116 47.4
MCO01G210 Micromonas commoda HOM05D004997 ORTHO05D005921 2.2e-19 99.4 121 42.1
Zm00001eb258640 Zea mays HOM05D004997 ORTHO05D005921 1.4e-18 96.7 67 70.1
Zm00001eb151600 Zea mays HOM05D000394 ORTHO05D016690 4.2e-18 95.1 64 71.9
Zm00001eb310800 Zea mays HOM05D000394 ORTHO05D016690 1.2e-17 93.6 64 70.3
Zm00001eb139040 Zea mays HOM05D000901 ORTHO05D005921 2.7e-17 92.4 78 60.3
Zm00001eb225310 Zea mays HOM05D000901 ORTHO05D005921 6.0e-17 91.3 66 68.2
Zm00001eb269380 Zea mays HOM05D000901 ORTHO05D005921 1.3e-16 90.1 65 69.2
Zm00001eb344510 Zea mays HOM05D000901 ORTHO05D000768 1.1e-15 87.0 68 63.2
Haze_05599 Corylus avellana HOM05D004997 ORTHO05D005921 9.6e-15 84.0 173 39.9
Cre12.g502750 Chlamydomonas reinhardtii HOM05D004997 ORTHO05D005921 1.6e-14 83.2 114 41.2
Cfa022129 Carpinus fangiana HOM05D004997 ORTHO05D005921 1.9e-10 69.7 123 33.3
CBR_g48714 Chara braunii HOM05D004997 ORTHO05D005921 9.3e-10 67.4 120 40.0
arahy.Tifrunner.gnm1.ann1.MPJ1GQ Arachis hypogaea HOM05D004997 ORTHO05D005921 1.0e-08 63.9 51 68.6


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