Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv32213 Davidia involucrata HOM05D007799 ORTHO05D009854 2.1e-100 369.0 183 100.0
QL05p055084 Quercus lobata HOM05D007799 ORTHO05D009854 1.0e-62 243.8 184 67.9
Cfa000897 Carpinus fangiana HOM05D007799 ORTHO05D009854 8.6e-62 240.7 180 66.7
Actinidia32344 Actinidia chinensis HOM05D007799 ORTHO05D009854 2.5e-61 239.2 184 67.4
Manes.15G125000 Manihot esculenta HOM05D007799 ORTHO05D009854 2.1e-60 236.1 184 64.7
Prupe.4G085700 Prunus persica HOM05D007799 ORTHO05D009854 4.7e-60 235.0 177 67.2
GSVIVG01021549001 Vitis vinifera HOM05D007799 ORTHO05D009854 8.1e-60 234.2 181 64.6
MD10G1258100 Malus domestica HOM05D007799 ORTHO05D009854 5.2e-59 231.5 184 64.7
Duzib192G0648 Durio zibethinus HOM05D007799 ORTHO05D009854 7.5e-58 227.6 175 64.6
Haze_05684 Corylus avellana HOM05D007799 ORTHO05D009854 1.3e-57 226.9 170 65.9
Duzib235G1165 Durio zibethinus HOM05D007799 ORTHO05D009854 1.4e-56 223.4 174 62.1
Lj6g0006831 Lotus japonicus HOM05D007799 ORTHO05D009854 1.4e-56 223.4 182 59.3
Cc00_g02020 Coffea canephora HOM05D007799 ORTHO05D009854 3.2e-56 222.2 183 61.2
MD05G1279400 Malus domestica HOM05D007799 ORTHO05D009854 5.4e-56 221.5 184 63.6
FvH4_3g05030 Fragaria vesca HOM05D007799 ORTHO05D009854 7.1e-56 221.1 183 62.3
CiPaw.09G119600 Carya illinoinensis HOM05D007799 ORTHO05D009854 9.2e-56 220.7 185 63.8
FAN25G3832 Fragaria x ananassa HOM05D007799 ORTHO05D009854 9.2e-56 220.7 177 63.3
RcHm_v2.0_Chr5g0014941 Rosa chinensis HOM05D007799 ORTHO05D009854 1.2e-55 220.3 178 64.6
FAN11G0145 Fragaria x ananassa HOM05D007799 ORTHO05D009854 2.1e-55 219.5 177 62.7
FAN16G3425 Fragaria x ananassa HOM05D007799 ORTHO05D009854 2.7e-55 219.2 177 62.7
Thecc.06G144300 Theobroma cacao HOM05D007799 ORTHO05D009854 2.7e-55 219.2 174 63.8
FAN21G3556 Fragaria x ananassa HOM05D007799 ORTHO05D009854 4.6e-55 218.4 177 62.7
Glyma.15G090500 Glycine max HOM05D007799 ORTHO05D009854 4.6e-55 218.4 183 61.2
Glyma.13G221700 Glycine max HOM05D007799 ORTHO05D009854 1.0e-54 217.2 183 60.7
Rhsim13G0117700 Rhododendron simsii HOM05D007799 ORTHO05D009854 1.5e-53 213.4 158 68.4
Nitab4.5_0005655g0010 Nicotiana tabacum HOM05D007799 ORTHO05D009854 1.9e-53 213.0 184 61.4
CSS0034958 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 2.5e-53 212.6 162 67.3
Peaxi162Scf00045g02414 Petunia axillaris HOM05D007799 ORTHO05D009854 5.6e-53 211.5 170 61.2
CSS0035706 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 9.5e-53 210.7 162 66.7
vmacro03431 Vaccinium macrocarpon HOM05D007799 ORTHO05D009854 9.5e-53 210.7 180 62.8
MBI02_g12199_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 2.8e-52 209.1 170 57.6
Eucgr.D00266 Eucalyptus grandis HOM05D007799 ORTHO05D009854 3.6e-52 208.8 183 59.6
PGSC0003DMG400002292 Solanum tuberosum HOM05D007799 ORTHO05D009854 4.7e-52 208.4 170 62.4
Medtr2g018670 Medicago truncatula HOM05D007799 ORTHO05D009854 6.2e-52 208.0 182 59.3
VMungo0540G2150 Vigna mungo HOM05D007799 ORTHO05D009854 6.2e-52 208.0 184 58.2
CiPaw.10G088800 Carya illinoinensis HOM05D007799 ORTHO05D009854 8.1e-52 207.6 186 58.6
MBI18_g11218_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 8.1e-52 207.6 170 60.6
Psat1g192080 Pisum sativum HOM05D007799 ORTHO05D009854 8.1e-52 207.6 182 58.8
Phvul.006G168136 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 1.1e-51 207.2 184 58.7
Lalb_Chr20g0117681 Lupinus albus HOM05D007799 ORTHO05D009854 4.0e-51 205.3 170 60.0
Ca_00511_v3 Cicer arietinum L. HOM05D007799 ORTHO05D009854 5.2e-51 204.9 174 59.8
Oeu032721.1 Olea europaea HOM05D007799 ORTHO05D009854 6.8e-51 204.5 157 66.2
COL.COLO4_31009 Corchorus olitorius HOM05D007799 ORTHO05D009854 1.2e-50 203.8 161 64.0
Lalb_Chr15g0086631 Lupinus albus HOM05D007799 ORTHO05D009854 2.0e-50 203.0 180 57.8
arahy.Tifrunner.gnm1.ann1.80ML42 Arachis hypogaea HOM05D007799 ORTHO05D009854 6.4e-49 198.0 180 56.1
CANSAT35G1982 Cannabis sativa HOM05D007799 ORTHO05D009854 8.4e-49 197.6 184 62.0
Nitab4.5_0000315g0030 Nicotiana tabacum HOM05D007799 ORTHO05D009854 8.4e-49 197.6 161 61.5
arahy.Tifrunner.gnm1.ann1.NZ6SRJ Arachis hypogaea HOM05D007799 ORTHO05D009854 1.4e-48 196.8 180 56.1
Glyma.05G143400 Glycine max HOM05D007799 ORTHO05D009854 1.9e-48 196.4 183 55.7
Nn3g20329 Nelumbo nucifera HOM05D007799 ORTHO05D009854 1.9e-48 196.4 173 57.8
Glyma.08G099800 Glycine max HOM05D007799 ORTHO05D009854 4.1e-48 195.3 180 55.0
TPR.G26257 Trifolium pratense HOM05D007799 ORTHO05D009854 2.1e-47 193.0 171 57.9
ECA236G2997 Erigeron canadensis HOM05D007799 ORTHO05D009854 6.0e-47 191.4 181 50.8
TPR.G9572 Trifolium pratense HOM05D007799 ORTHO05D009854 1.7e-46 189.9 180 56.1
Medtr8g079475 Medicago truncatula HOM05D007799 ORTHO05D009854 3.9e-46 188.7 184 54.9
SalBow8G4130 Salvia bowleyana HOM05D007799 ORTHO05D009854 3.9e-46 188.7 159 61.0
Atru.chr10.1081 Acer truncatum HOM05D007799 ORTHO05D009854 5.1e-46 188.3 151 58.9
Oeu031191.1 Olea europaea HOM05D007799 ORTHO05D009854 5.1e-46 188.3 152 63.2
PGR083G2472 Punica granatum HOM05D007799 ORTHO05D009854 1.1e-45 187.2 157 60.5
HanXRQChr15g0482011 Helianthus annuus HOM05D007799 ORTHO05D009854 1.5e-45 186.8 171 52.6
Sopen08g008720 Solanum pennellii HOM05D007799 ORTHO05D009854 2.5e-45 186.0 153 58.8
Migut.K01168 Erythranthe guttata HOM05D007799 ORTHO05D009854 7.3e-45 184.5 144 63.9
VMungo0251G0945 Vigna mungo HOM05D007799 ORTHO05D009854 9.6e-45 184.1 174 54.0
DCAR_003890 Daucus carota HOM05D007799 ORTHO05D009854 2.1e-44 183.0 179 51.4
Lsat_1_v5_gn_7_27461 Lactuca sativa HOM05D007799 ORTHO05D009854 2.1e-44 183.0 174 53.4
Potri.011G081701 Populus trichocarpa HOM05D007799 ORTHO05D009854 2.8e-44 182.6 160 60.6
Ciclev10016395m.g Citrus clementina HOM05D007799 ORTHO05D009854 4.7e-44 181.8 184 51.1
HanXRQChr04g0116571 Helianthus annuus HOM05D007799 ORTHO05D009854 1.4e-43 180.3 173 53.2
Solyc08g023510.3 Solanum lycopersicum HOM05D007799 ORTHO05D009854 1.4e-43 180.3 146 58.9
arahy.Tifrunner.gnm1.ann1.GW4I6G Arachis hypogaea HOM05D002205 ORTHO05D004847 1.2e-42 177.2 184 53.3
Lalb_Chr13g0294011 Lupinus albus HOM05D007799 ORTHO05D009854 2.0e-42 176.4 180 51.7
arahy.Tifrunner.gnm1.ann1.W0WEAA Arachis hypogaea HOM05D007799 ORTHO05D009854 5.8e-42 174.9 182 52.7
Gorai.010G237400 Gossypium raimondii HOM05D007799 ORTHO05D009854 5.8e-42 174.9 161 59.6
Phvul.002G177900 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 3.8e-41 172.2 174 50.6
Gohir.A06G196000 Gossypium hirsutum HOM05D007799 ORTHO05D009854 4.9e-41 171.8 161 59.0
ClCG03G006490 Citrullus lanatus HOM05D007799 ORTHO05D009854 1.2e-39 167.2 159 56.0
Gohir.D06G203500 Gossypium hirsutum HOM05D007799 ORTHO05D009854 2.7e-39 166.0 147 59.9
HPP92_026553 Vanilla planifolia HOM05D007799 ORTHO05D009854 6.6e-38 161.4 160 48.1
CsaV3_1G036880 Cucumis sativus L. HOM05D007799 ORTHO05D009854 4.3e-37 158.7 160 53.1
Sed0012400 Sechium edule HOM05D007799 ORTHO05D009854 1.7e-33 146.7 152 51.3
DCAR_007872 Daucus carota HOM05D007799 ORTHO05D009854 2.2e-33 146.4 182 44.0
CDE12G0863 Ceratophyllum demersum HOM05D007799 ORTHO05D009854 2.7e-31 139.4 161 43.5
HPP92_028169 Vanilla planifolia HOM05D007799 ORTHO05D009854 2.5e-29 132.9 160 41.2
TAR624G0778 Trochodendron aralioides HOM05D007799 ORTHO05D009854 2.1e-28 129.8 103 68.0
ATR1098G006 Amborella trichopoda HOM05D007799 ORTHO05D009854 2.0e-26 123.2 157 41.4
HPP92_026526 Vanilla planifolia HOM05D007799 ORTHO05D009854 1.1e-21 107.5 96 51.0
MELO3C035703.2 Cucumis melo HOM05D007799 ORTHO05D009854 1.7e-17 93.6 95 52.6
SEGI_29226 Sequoiadendron giganteum HOM05D007799 ORTHO05D009854 1.1e-11 74.3 135 32.6
Lj1C1169G11 Lonicera japonica HOM05D002205 ORTHO05D004847 2.0e-10 70.1 50 68.0


User provided reference genes

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