Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv32169 Davidia involucrata HOM05D005651 ORTHO05D006877 9.2e-279 963.0 515 100.0
Actinidia13837 Actinidia chinensis HOM05D005651 ORTHO05D006877 1.5e-204 716.5 462 78.8
Lj3A268T25 Lonicera japonica HOM05D005651 ORTHO05D006877 3.7e-195 685.3 480 72.7
Lj3C272T4 Lonicera japonica HOM05D005651 ORTHO05D006877 2.0e-193 679.5 476 72.9
Cfa008665 Carpinus fangiana HOM05D005651 ORTHO05D006877 3.6e-182 642.1 462 69.0
TAR362G0451 Trochodendron aralioides HOM05D005651 ORTHO05D006877 1.8e-181 639.8 503 68.0
MD04G1022200 Malus domestica HOM05D005651 ORTHO05D006877 1.7e-179 633.3 486 65.8
RcHm_v2.0_Chr4g0412451 Rosa chinensis HOM05D005651 ORTHO05D006877 2.9e-179 632.5 462 68.0
Lsat_1_v5_gn_2_47921 Lactuca sativa HOM05D005651 ORTHO05D006877 2.4e-178 629.4 463 68.3
RcHm_v2.0_Chr4g0412511 Rosa chinensis HOM05D005651 ORTHO05D006877 5.4e-178 628.2 462 67.7
FvH4_4g12860 Fragaria vesca HOM05D005651 ORTHO05D006877 7.3e-175 617.8 462 66.7
FAN12G2514 Fragaria x ananassa HOM05D005651 ORTHO05D006877 7.3e-175 617.8 462 66.7
FAN07G2778 Fragaria x ananassa HOM05D005651 ORTHO05D006877 8.9e-173 610.9 462 66.0
Prupe.1G172400 Prunus persica HOM05D005651 ORTHO05D006877 2.0e-172 609.8 508 62.6
Nn8g41263 Nelumbo nucifera HOM05D005651 ORTHO05D006877 3.4e-172 609.0 459 68.6
HanXRQChr14g0436391 Helianthus annuus HOM05D005651 ORTHO05D006877 5.8e-172 608.2 463 67.4
GSVIVG01031569001 Vitis vinifera HOM05D005651 ORTHO05D006877 2.9e-171 605.9 463 67.4
CANSAT78G1330 Cannabis sativa HOM05D005651 ORTHO05D006877 1.9e-170 603.2 465 66.2
FAN17G0433 Fragaria x ananassa HOM05D005651 ORTHO05D006877 1.7e-168 596.7 462 65.4
Gohir.D02G018500 Gossypium hirsutum HOM05D005651 ORTHO05D006877 8.1e-166 587.8 461 64.0
SGA_v2.0_scaffold12G06118 Striga asiatica HOM05D005651 ORTHO05D006877 1.1e-165 587.4 463 64.8
COL.COLO4_35960 Corchorus olitorius HOM05D005651 ORTHO05D006877 2.4e-165 586.3 461 63.1
Nitab4.5_0001422g0060 Nicotiana tabacum HOM05D005651 ORTHO05D006877 2.2e-163 579.7 471 62.0
Thecc.04G191000 Theobroma cacao HOM05D005651 ORTHO05D006877 2.9e-163 579.3 461 63.3
Sopen03g033090 Solanum pennellii HOM05D005651 ORTHO05D006877 8.4e-163 577.8 463 62.2
Cc03_g09140 Coffea canephora HOM05D005651 ORTHO05D006877 1.4e-162 577.0 462 64.3
Nitab4.5_0009569g0040 Nicotiana tabacum HOM05D005651 ORTHO05D006877 1.9e-162 576.6 471 61.8
Haze_11684 Corylus avellana HOM05D005651 ORTHO05D006877 7.1e-162 574.7 571 55.2
Peaxi162Scf00017g02338 Petunia axillaris HOM05D005651 ORTHO05D006877 7.1e-162 574.7 463 63.1
SalBow1G5228 Salvia bowleyana HOM05D005651 ORTHO05D006877 1.9e-159 566.6 469 61.4
Gohir.A02G016900 Gossypium hirsutum HOM05D005651 ORTHO05D006877 3.3e-159 565.8 461 62.0
Gorai.005G022800 Gossypium raimondii HOM05D005651 ORTHO05D006877 5.6e-159 565.1 461 62.3
Cpa.g.sc157.13 Carica papaya HOM05D005651 ORTHO05D006877 2.1e-158 563.1 461 61.8
SalBow1G5941 Salvia bowleyana HOM05D005651 ORTHO05D006877 3.6e-158 562.4 469 61.0
QL06p027298 Quercus lobata HOM05D005651 ORTHO05D006877 1.8e-157 560.1 464 63.6
Aqoxy2G04074 Aquilegia oxysepala HOM05D005651 ORTHO05D006877 5.3e-157 558.5 471 62.4
Sc25g0005740 Simmondsia chinensis HOM05D005651 ORTHO05D006877 1.3e-155 553.9 462 62.1
PSO063G2404 Papaver somniferum HOM05D005651 ORTHO05D006877 4.9e-155 552.0 463 61.3
Ca_16431_v3 Cicer arietinum L. HOM05D005651 ORTHO05D006877 2.3e-152 543.1 462 60.2
THA.LOC104808673 Tarenaya hassleriana HOM05D005651 ORTHO05D006877 1.5e-151 540.4 462 59.5
ClCG08G003660 Citrullus lanatus HOM05D005651 ORTHO05D006877 2.5e-151 539.7 466 60.9
CsaV3_6G003070 Cucumis sativus L. HOM05D005651 ORTHO05D006877 3.3e-151 539.3 466 60.7
Medtr3g084640 Medicago truncatula HOM05D005651 ORTHO05D006877 5.6e-151 538.5 461 61.0
Migut.G00953 Erythranthe guttata HOM05D005651 ORTHO05D006877 2.1e-150 536.6 467 61.2
TPR.G18109 Trifolium pratense HOM05D005651 ORTHO05D006877 1.4e-149 533.9 468 60.3
Glyma.11G253600 Glycine max HOM05D005651 ORTHO05D006877 2.6e-148 529.6 464 59.5
Lj6g0020014 Lotus japonicus HOM05D005651 ORTHO05D006877 3.8e-147 525.8 463 59.4
AT4G14180 Arabidopsis thaliana HOM05D005651 ORTHO05D006877 6.4e-147 525.0 462 58.4
Rhsim02G0090700 Rhododendron simsii HOM05D005651 ORTHO05D006877 8.4e-147 524.6 332 79.2
Phvul.001G265000 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 1.9e-146 523.5 463 58.7
PGR083G1656 Punica granatum HOM05D005651 ORTHO05D006877 4.2e-146 522.3 460 60.0
VMungo1383G2894 Vigna mungo HOM05D005651 ORTHO05D006877 5.4e-146 521.9 466 59.0
Aa31LG9G3210 Aethionema arabicum HOM05D005651 ORTHO05D006877 1.2e-145 520.8 462 57.4
AL7G42200 Arabidopsis lyrata HOM05D005651 ORTHO05D006877 7.9e-145 518.1 462 56.9
Carub.0007s2821 Capsella rubella HOM05D005651 ORTHO05D006877 5.1e-144 515.4 462 57.4
Solyc03g114040.3 Solanum lycopersicum HOM05D005651 ORTHO05D006877 1.1e-143 514.2 509 54.0
Ciclev10004169m.g Citrus clementina HOM05D005651 ORTHO05D006877 1.3e-142 510.8 462 58.2
Eucgr.H02630 Eucalyptus grandis HOM05D005651 ORTHO05D006877 2.8e-142 509.6 464 57.3
Sed0004152 Sechium edule HOM05D005651 ORTHO05D006877 1.1e-141 507.7 465 57.8
Sp5g13520 Schrenkiella parvula HOM05D005651 ORTHO05D006877 1.8e-141 506.9 461 56.4
C03p35350 Brassica napus HOM05D005651 ORTHO05D006877 9.0e-141 504.6 462 56.1
MBI11_g07399_MAGBIO Magnolia biondii HOM05D005651 ORTHO05D006877 4.5e-140 502.3 496 56.5
BcaC01g04643 Brassica carinata HOM05D005651 ORTHO05D006877 5.8e-140 501.9 462 55.8
BolC3t15845H Brassica oleracea HOM05D005651 ORTHO05D006877 5.8e-140 501.9 462 55.8
BcaB01g02715 Brassica carinata HOM05D005651 ORTHO05D006877 4.2e-138 495.7 462 55.2
Atru.chr3.1766 Acer truncatum HOM05D005651 ORTHO05D006877 5.5e-138 495.4 400 65.8
A03p29160 Brassica napus HOM05D005651 ORTHO05D006877 5.5e-138 495.4 462 55.0
unitig_748.g8008 Utricularia gibba HOM05D005651 ORTHO05D006877 2.1e-137 493.4 463 53.8
arahy.Tifrunner.gnm1.ann1.RD9PAU Arachis hypogaea HOM05D005651 ORTHO05D006877 4.6e-137 492.3 466 56.4
arahy.Tifrunner.gnm1.ann1.EYX4BI Arachis hypogaea HOM05D005651 ORTHO05D006877 6.2e-134 481.9 473 55.2
arahy.Tifrunner.gnm1.ann1.9V91M6 Arachis hypogaea HOM05D005651 ORTHO05D006877 1.5e-132 477.2 463 55.3
arahy.Tifrunner.gnm1.ann1.4U9R65 Arachis hypogaea HOM05D005651 ORTHO05D006877 3.4e-132 476.1 483 54.5
CARHR220210 Cardamine hirsuta HOM05D005651 ORTHO05D006877 3.4e-132 476.1 462 54.8
Thhalv10027320m.g Eutrema salsugineum HOM05D005651 ORTHO05D006877 7.6e-132 474.9 461 54.0
Phvul.006G051700 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 1.4e-130 470.7 463 55.1
ECA238G0348 Erigeron canadensis HOM05D005651 ORTHO05D006877 4.2e-130 469.2 398 61.6
EL10Ac3g07437 Beta vulgaris HOM05D005651 ORTHO05D006877 9.3e-130 468.0 462 55.2
ATR0582G376 Amborella trichopoda HOM05D005651 ORTHO05D006877 1.9e-127 460.3 463 53.1
Oeu050724.1 Olea europaea HOM05D005651 ORTHO05D006877 3.3e-127 459.5 332 69.6
Potri.002G232700 Populus trichocarpa HOM05D005651 ORTHO05D006877 3.1e-125 453.0 477 53.7
Sabra02G0177500 Salix brachista HOM05D005651 ORTHO05D006877 3.2e-122 443.0 452 54.6
DCAR_026668 Daucus carota HOM05D005651 ORTHO05D006877 6.7e-120 435.3 344 66.6
PSO017G3585 Papaver somniferum HOM05D005651 ORTHO05D006877 3.7e-118 429.5 374 59.4
HPP92_024561 Vanilla planifolia HOM05D005651 ORTHO05D006877 1.4e-117 427.6 477 49.7
AUR62018536 Chenopodium quinoa HOM05D005651 ORTHO05D006877 7.7e-116 421.8 385 59.7
CAN.G781.41 Capsicum annuum HOM05D005651 ORTHO05D006877 1.5e-111 407.5 443 51.0
TWI56G0421 Tripterygium wilfordii HOM05D005651 ORTHO05D006877 6.5e-107 392.1 335 60.9
Duzib212G0903 Durio zibethinus HOM05D005651 ORTHO05D006877 1.1e-106 391.3 317 64.4
AUR62020881 Chenopodium quinoa HOM05D005651 ORTHO05D006877 3.2e-106 389.8 394 55.1
Psat2g094320 Pisum sativum HOM05D005651 ORTHO05D006877 1.6e-100 370.9 335 58.2
CDE02G2388 Ceratophyllum demersum HOM05D005651 ORTHO05D006877 2.2e-99 367.1 418 50.2
Manes.05G198800 Manihot esculenta HOM05D005651 ORTHO05D006877 1.1e-98 364.8 295 62.4
Ah.04g149640 Amaranthus hybridus HOM05D005651 ORTHO05D006877 9.1e-93 345.1 334 56.0
SEGI_00340 Sequoiadendron giganteum HOM05D005651 ORTHO05D006877 6.5e-91 339.0 474 41.6
Lalb_Chr24g0394531 Lupinus albus HOM05D005651 ORTHO05D006877 3.0e-88 330.1 302 58.6
CiPaw.01G113500 Carya illinoinensis HOM05D005651 ORTHO05D006877 4.1e-85 319.7 232 67.7
Os04g0347800 Oryza sativa ssp. japonica HOM05D005651 ORTHO05D006877 2.5e-74 283.9 338 46.4
SHI01044 Sapria himalayana HOM05D005651 ORTHO05D006877 8.3e-70 268.9 237 56.5
Mapoly0195s0003 Marchantia polymorpha HOM05D005651 ORTHO05D006877 8.9e-64 248.8 474 33.8
vmacro15591 Vaccinium macrocarpon HOM05D005651 ORTHO05D006877 1.7e-62 244.6 328 47.3
Pp3c15_15330 Physcomitrium patens HOM05D005651 ORTHO05D006877 1.6e-49 201.4 476 28.2
Zm00001eb389920 Zea mays HOM05D005651 ORTHO05D006877 2.8e-49 200.7 191 48.7
SHI01039 Sapria himalayana HOM05D005651 ORTHO05D006877 4.9e-46 189.9 163 57.1
Ah.04g149630 Amaranthus hybridus HOM05D005651 ORTHO05D006877 1.4e-40 171.8 127 67.7
Lalb_Chr24g0394541 Lupinus albus HOM05D005651 ORTHO05D006877 4.3e-34 150.2 130 60.0
BraA03t12111Z Brassica rapa HOM05D005651 ORTHO05D006877 9.6e-34 149.1 128 57.0
BcaB01g02718 Brassica carinata HOM05D005651 ORTHO05D006877 3.3e-26 124.0 111 57.7
SHI01042 Sapria himalayana HOM05D005651 ORTHO05D006877 1.3e-11 75.5 73 58.9
Phvul.004G062100 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 1.1e-10 72.4 90 41.1
Atru.chr3.1765 Acer truncatum HOM05D005651 ORTHO05D006877 1.9e-10 71.6 49 65.3
Pp3c1_19010 Physcomitrium patens HOM05D005651 ORTHO05D006877 3.1e-08 64.3 105 38.1


User provided reference genes

Program Settings