Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv32167 Davidia involucrata HOM05D007897 ORTHO05D010061 1.1e-213 746.9 534 100.0
CSS0029276 Camellia sinensis var. sinensis HOM05D007897 ORTHO05D010061 1.1e-128 464.5 535 72.5
TAR633G2792 Trochodendron aralioides HOM05D007897 ORTHO05D010061 1.9e-117 427.2 521 72.2
TAR633G2399 Trochodendron aralioides HOM05D007897 ORTHO05D010061 1.2e-108 397.9 508 70.5
TWI23G0094 Tripterygium wilfordii HOM05D007897 ORTHO05D010061 3.3e-106 389.8 491 67.8
Nn8g41262 Nelumbo nucifera HOM05D007897 ORTHO05D010061 9.7e-106 388.3 496 69.4
Manes.05G198900 Manihot esculenta HOM05D007897 ORTHO05D010061 7.0e-104 382.1 522 65.9
Thecc.04G191100 Theobroma cacao HOM05D007897 ORTHO05D010061 5.9e-103 379.0 527 63.6
QL06p027281 Quercus lobata HOM05D007897 ORTHO05D010061 1.7e-102 377.5 525 66.5
Cfa008662 Carpinus fangiana HOM05D007897 ORTHO05D010061 9.4e-101 371.7 502 68.9
Haze_11681 Corylus avellana HOM05D007897 ORTHO05D010061 1.2e-100 371.3 459 73.2
Ciclev10004784m.g Citrus clementina HOM05D007897 ORTHO05D010061 3.0e-99 366.7 452 70.8
MD04G1021700 Malus domestica HOM05D007897 ORTHO05D010061 1.2e-98 364.8 442 73.3
Gohir.D09G201400 Gossypium hirsutum HOM05D007897 ORTHO05D010061 4.1e-96 356.3 429 65.5
COL.COLO4_35959 Corchorus olitorius HOM05D007897 ORTHO05D010061 1.6e-95 354.4 452 61.9
Sabra14G0112700 Salix brachista HOM05D007897 ORTHO05D010061 4.5e-95 352.8 453 70.6
Gorai.006G225200 Gossypium raimondii HOM05D007897 ORTHO05D010061 1.7e-94 350.9 429 65.0
CSS0018651 Camellia sinensis var. sinensis HOM05D007897 ORTHO05D010061 7.2e-93 345.5 388 79.9
Cpa.g.sc157.16 Carica papaya HOM05D007897 ORTHO05D010061 1.0e-91 341.7 437 69.8
Sed0009503 Sechium edule HOM05D007897 ORTHO05D010061 1.8e-91 340.9 456 68.2
FvH4_4g12861 Fragaria vesca HOM05D007897 ORTHO05D010061 2.4e-88 330.5 447 67.8
Duzib212G0894 Durio zibethinus HOM05D007897 ORTHO05D010061 7.0e-88 328.9 496 57.1
CANSAT78G0179 Cannabis sativa HOM05D007897 ORTHO05D010061 2.7e-87 327.0 499 64.1
VMungo1383G3288 Vigna mungo HOM05D007897 ORTHO05D010061 2.7e-87 327.0 440 67.3
RcHm_v2.0_Chr4g0412521 Rosa chinensis HOM05D007897 ORTHO05D010061 4.5e-87 326.2 522 61.9
PSO063G5193 Papaver somniferum HOM05D007897 ORTHO05D010061 8.6e-86 322.0 491 53.8
FAN07G0261 Fragaria x ananassa HOM05D005839 ORTHO05D005686 1.9e-85 320.9 447 66.9
PSO017G4232 Papaver somniferum HOM05D007897 ORTHO05D010061 3.3e-85 320.1 492 53.7
arahy.Tifrunner.gnm1.ann1.T7EAWL Arachis hypogaea HOM05D007897 ORTHO05D010061 1.2e-84 318.2 471 66.0
Eucgr.L00640 Eucalyptus grandis HOM05D007897 ORTHO05D010061 2.1e-84 317.4 446 56.5
Phvul.001G265200 Phaseolus vulgaris HOM05D007897 ORTHO05D010061 2.8e-84 317.0 440 66.8
Glyma.18G003400 Glycine max HOM05D007897 ORTHO05D010061 8.0e-84 315.5 446 67.3
Lalb_Chr03g0036571 Lupinus albus HOM05D007897 ORTHO05D010061 8.0e-84 315.5 457 57.5
arahy.Tifrunner.gnm1.ann1.TEUF1S Arachis hypogaea HOM05D007897 ORTHO05D010061 1.8e-83 314.3 438 68.7
ATR0807G097 Amborella trichopoda HOM05D007897 ORTHO05D010061 3.7e-81 306.6 483 63.1
Cc03_g09150 Coffea canephora HOM05D007897 ORTHO05D010061 3.7e-81 306.6 478 64.0
Glyma.11G253700 Glycine max HOM05D007897 ORTHO05D010061 8.3e-81 305.4 450 65.6
MBI07_g06195_MAGBIO Magnolia biondii HOM05D007897 ORTHO05D010061 9.2e-80 302.0 454 67.6
THA.LOC104808674 Tarenaya hassleriana HOM05D007897 ORTHO05D010061 1.2e-79 301.6 442 64.7
CARHR220230 Cardamine hirsuta HOM05D007897 ORTHO05D010061 1.1e-77 295.0 450 60.4
PGR142G1366 Punica granatum HOM05D007897 ORTHO05D010061 1.6e-76 291.2 461 52.3
AL7G42190 Arabidopsis lyrata HOM05D007897 ORTHO05D010061 4.0e-75 286.6 453 59.6
Thhalv10027442m.g Eutrema salsugineum HOM05D007897 ORTHO05D010061 2.0e-74 284.3 458 61.1
ECA248G1461 Erigeron canadensis HOM05D007897 ORTHO05D010061 1.4e-72 278.1 470 56.6
CiPaw.02G062400 Carya illinoinensis HOM05D007897 ORTHO05D010061 2.4e-72 277.3 373 75.9
Potri.014G149500 Populus trichocarpa HOM05D007897 ORTHO05D010061 2.7e-71 273.9 371 73.6
AT4G14190 Arabidopsis thaliana HOM05D007897 ORTHO05D010061 7.8e-71 272.3 498 57.2
HanXRQChr17g0535531 Helianthus annuus HOM05D007897 ORTHO05D010061 6.6e-70 269.2 497 56.1
Aa31LG9G3200 Aethionema arabicum HOM05D007897 ORTHO05D010061 1.5e-69 268.1 455 61.3
HanXRQChr01g0022031 Helianthus annuus HOM05D007897 ORTHO05D010061 1.9e-69 267.7 491 56.8
Oeu050722.1 Olea europaea HOM05D005839 ORTHO05D009229 4.3e-69 266.5 375 73.6
Gohir.A09G207900 Gossypium hirsutum HOM05D007897 ORTHO05D010061 7.3e-69 265.8 192 66.1
Sp6g16180 Schrenkiella parvula HOM05D007897 ORTHO05D010061 6.2e-68 262.7 488 57.0
Carub.0007s2820 Capsella rubella HOM05D007897 ORTHO05D010061 2.3e-67 260.8 449 57.7
BcaB08g35766 Brassica carinata HOM05D007897 ORTHO05D010061 2.0e-66 257.7 495 53.7
FAN17G1799 Fragaria x ananassa HOM05D005839 ORTHO05D005686 8.3e-65 252.3 378 67.5
Lsat_1_v5_gn_1_70121 Lactuca sativa HOM05D007897 ORTHO05D010061 3.2e-64 250.4 446 55.8
Atru.chr3.1764 Acer truncatum HOM05D007897 ORTHO05D010061 3.5e-63 246.9 182 63.2
A10p11440 Brassica napus HOM05D007897 ORTHO05D010061 3.9e-62 243.4 497 53.9
BraA10t43238Z Brassica rapa HOM05D007897 ORTHO05D010061 3.9e-62 243.4 497 53.7
C09p44340 Brassica napus HOM05D007897 ORTHO05D010061 1.5e-61 241.5 443 56.7
Oeu050723.3 Olea europaea HOM05D007897 ORTHO05D009229 1.9e-61 241.1 165 69.1
FAN22G1341 Fragaria x ananassa HOM05D007897 ORTHO05D010061 3.1e-59 233.8 175 63.4
BolC9t57304H Brassica oleracea HOM05D007897 ORTHO05D010061 2.0e-58 231.1 496 52.8
HPP92_007232 Vanilla planifolia HOM05D007897 ORTHO05D010061 6.6e-54 216.1 419 60.1
Manes.05G199032 Manihot esculenta HOM05D007897 ORTHO05D010061 1.8e-51 208.0 380 67.4
BcaC04g20377 Brassica carinata HOM05D007897 ORTHO05D010061 4.6e-47 193.4 496 43.3
Prupe.1G171300 Prunus persica HOM05D007897 ORTHO05D010061 1.1e-40 172.2 389 64.8
arahy.Tifrunner.gnm1.ann1.EZRM4Y Arachis hypogaea HOM05D007897 ORTHO05D010061 3.3e-37 160.6 348 67.8
HanXRQChr09g0243521 Helianthus annuus HOM05D007897 ORTHO05D010061 7.4e-21 106.3 110 53.6
Thhalv10027431m.g Eutrema salsugineum HOM05D007897 ORTHO05D010061 5.9e-18 96.7 90 52.2
Gorai.001G135500 Gossypium raimondii HOM05D007897 ORTHO05D010061 4.2e-16 90.5 146 39.0
Gohir.D01G146401 Gossypium hirsutum HOM05D007897 ORTHO05D010061 2.5e-13 81.3 136 39.7
Gohir.D07G125650 Gossypium hirsutum HOM05D007897 ORTHO05D010061 2.5e-13 81.3 78 50.0
Gohir.D13G096925 Gossypium hirsutum HOM05D007897 ORTHO05D010061 9.7e-13 79.3 67 52.2
Gorai.002G182100 Gossypium raimondii HOM05D007897 ORTHO05D010061 3.7e-12 77.4 143 37.8
FAN22G1963 Fragaria x ananassa HOM05D007897 ORTHO05D010061 1.1e-11 75.9 71 56.3
Hund24443 Selenicereus undatus HOM05D007897 ORTHO05D010061 1.4e-11 75.5 90 43.3
PGR083G2517 Punica granatum HOM05D007036 ORTHO05D008885 2.6e-10 71.2 195 27.7
TAR636G0074 Trochodendron aralioides HOM05D007036 ORTHO05D008885 7.7e-10 69.7 199 28.6
A02p10540 Brassica napus HOM05D007897 ORTHO05D010061 1.3e-09 68.9 60 53.3
Gohir.D02G105900 Gossypium hirsutum HOM05D007897 ORTHO05D010061 1.7e-09 68.6 51 56.9
Peaxi162Scf00954g00025 Petunia axillaris HOM05D007036 ORTHO05D008885 2.9e-09 67.8 199 29.6
Lj2g0012301 Lotus japonicus HOM05D007036 ORTHO05D008885 3.8e-09 67.4 199 29.1
MBI13_g34303_MAGBIO Magnolia biondii HOM05D007036 ORTHO05D008885 6.5e-09 66.6 200 29.0
Cpa.g.sc115.26 Carica papaya HOM05D007036 ORTHO05D008885 1.9e-08 65.1 198 28.3
Aqoxy7G02614 Aquilegia oxysepala HOM05D007036 ORTHO05D008885 2.5e-08 64.7 197 26.9
arahy.Tifrunner.gnm1.ann1.UBG147 Arachis hypogaea HOM05D007036 ORTHO05D008885 2.5e-08 64.7 198 29.3
Mapoly0002s0203 Marchantia polymorpha HOM05D007036 ORTHO05D008885 2.5e-08 64.7 195 28.7
arahy.Tifrunner.gnm1.ann1.1YAE55 Arachis hypogaea HOM05D007036 ORTHO05D008885 3.2e-08 64.3 198 28.8
Gohir.A06G110000 Gossypium hirsutum HOM05D007036 ORTHO05D008885 3.2e-08 64.3 198 29.3
Gohir.D06G112000 Gossypium hirsutum HOM05D007036 ORTHO05D008885 3.2e-08 64.3 198 29.3
Gorai.010G127600 Gossypium raimondii HOM05D007036 ORTHO05D008885 4.2e-08 63.9 198 29.3
arahy.Tifrunner.gnm1.ann1.RRD271 Arachis hypogaea HOM05D007897 ORTHO05D010061 5.5e-08 63.5 48 58.3
PSO170G3146 Papaver somniferum HOM05D007036 ORTHO05D008885 5.5e-08 63.5 195 28.7
Thecc.09G196200 Theobroma cacao HOM05D007036 ORTHO05D008885 5.5e-08 63.5 205 30.7
Sc16g0002180 Simmondsia chinensis HOM05D007036 ORTHO05D008885 9.4e-08 62.8 199 26.1
ATR0626G201 Amborella trichopoda HOM05D007036 ORTHO05D008885 1.6e-07 62.0 203 26.1
Duzib168G0358 Durio zibethinus HOM05D007036 ORTHO05D008885 1.6e-07 62.0 201 30.8
Lj5P749T15 Lonicera japonica HOM05D007036 ORTHO05D008885 1.6e-07 62.0 198 26.8
Nn5g27062 Nelumbo nucifera HOM05D007036 ORTHO05D008885 1.6e-07 62.0 197 26.9
Migut.J00838 Erythranthe guttata HOM05D007036 ORTHO05D008885 2.1e-07 61.6 199 27.1
HPP92_028312 Vanilla planifolia HOM05D007036 ORTHO05D008885 2.7e-07 61.2 197 26.9
Nitab4.5_0000404g0190 Nicotiana tabacum HOM05D007036 ORTHO05D008885 7.9e-07 59.7 191 28.8
Os08g0520200 Oryza sativa ssp. japonica HOM05D007036 ORTHO05D008885 7.9e-07 59.7 195 25.6
CAN.G106.6 Capsicum annuum HOM05D007036 ORTHO05D008885 1.4e-06 58.9 200 28.5
Cc00_g00150 Coffea canephora HOM05D007036 ORTHO05D008885 1.4e-06 58.9 200 27.5
Pp3c4_3090 Physcomitrium patens HOM05D007036 ORTHO05D008885 1.4e-06 58.9 97 27.8
unitig_26.g9126 Utricularia gibba HOM05D007036 ORTHO05D008885 1.4e-06 58.9 198 25.8
Zm00001eb035670 Zea mays HOM05D007036 ORTHO05D008885 3.0e-06 57.8 195 27.2
Sopen05g027850 Solanum pennellii HOM05D007036 ORTHO05D008885 3.9e-06 57.4 202 28.7
SMO347G0413 Selaginella moellendorffii HOM05D007036 ORTHO05D008885 8.8e-06 56.2 147 27.9


User provided reference genes

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