Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv32141 Davidia involucrata HOM05D007267 ORTHO05D009053 3.7e-79 298.1 148 100.0
QL03p058144 Quercus lobata HOM05D007267 ORTHO05D009053 2.3e-41 172.6 131 67.9
Duzib170G0076 Durio zibethinus HOM05D007267 ORTHO05D009053 2.8e-39 165.6 132 64.4
MSTRG.12404 Avicennia marina HOM05D007267 ORTHO05D009053 1.4e-38 163.3 153 58.8
COL.COLO4_25353 Corchorus olitorius HOM05D007267 ORTHO05D009053 5.4e-38 161.4 134 64.2
Prupe.6G149700 Prunus persica HOM05D007267 ORTHO05D009053 1.2e-37 160.2 129 65.1
Ciclev10029598m.g Citrus clementina HOM05D007267 ORTHO05D009053 2.0e-37 159.5 132 64.4
Lj6g0001809 Lotus japonicus HOM05D007267 ORTHO05D009053 1.0e-36 157.1 132 64.4
Sabra09G0121800 Salix brachista HOM05D004779 ORTHO05D005737 2.3e-36 156.0 134 61.9
Lalb_Chr17g0347461 Lupinus albus HOM05D007267 ORTHO05D009053 2.9e-36 155.6 112 70.5
Manes.11G104200 Manihot esculenta HOM05D007267 ORTHO05D009053 3.8e-36 155.2 134 62.7
Nn2g14465 Nelumbo nucifera HOM05D007267 ORTHO05D009053 5.0e-36 154.8 131 66.4
TAR623G0997 Trochodendron aralioides HOM05D007267 ORTHO05D009053 5.0e-36 154.8 132 65.2
Duzib168G1484 Durio zibethinus HOM05D007267 ORTHO05D009053 8.6e-36 154.1 147 56.5
MD03G1161500 Malus domestica HOM05D007267 ORTHO05D009053 1.1e-35 153.7 130 63.8
CiPaw.13G125300 Carya illinoinensis HOM05D007267 ORTHO05D009053 1.5e-35 153.3 138 61.6
Medtr3g079820 Medicago truncatula HOM05D007267 ORTHO05D009053 1.9e-35 152.9 110 70.9
Potri.009G155300 Populus trichocarpa HOM05D007267 ORTHO05D009053 1.9e-35 152.9 134 61.9
Peaxi162Scf00345g00617 Petunia axillaris HOM05D007267 ORTHO05D009053 2.5e-35 152.5 133 62.4
arahy.Tifrunner.gnm1.ann1.YII7CZ Arachis hypogaea HOM05D007267 ORTHO05D009053 4.3e-35 151.8 119 66.4
arahy.Tifrunner.gnm1.ann1.NLVX9W Arachis hypogaea HOM05D007267 ORTHO05D009053 9.5e-35 150.6 103 71.8
FAN21G3895 Fragaria x ananassa HOM05D007267 ORTHO05D009053 9.5e-35 150.6 130 63.1
Nitab4.5_0001504g0080 Nicotiana tabacum HOM05D007267 ORTHO05D009053 9.5e-35 150.6 95 78.9
TPR.G15594 Trifolium pratense HOM05D007267 ORTHO05D009053 9.5e-35 150.6 114 69.3
Haze_02482 Corylus avellana HOM05D007267 ORTHO05D009053 2.1e-34 149.4 134 63.4
FAN16G2508 Fragaria x ananassa HOM05D007267 ORTHO05D009053 2.1e-34 149.4 131 61.8
Glyma.02G102300 Glycine max HOM05D007267 ORTHO05D009053 2.1e-34 149.4 131 62.6
Ca_16267_v3 Cicer arietinum L. HOM05D003229 ORTHO05D009053 2.8e-34 149.1 97 72.2
Glyma.07G213600 Glycine max HOM05D007267 ORTHO05D009053 2.8e-34 149.1 131 63.4
FvH4_3g26950 Fragaria vesca HOM05D007267 ORTHO05D009053 4.7e-34 148.3 130 62.3
Thecc.09G267200 Theobroma cacao HOM05D007267 ORTHO05D009053 4.7e-34 148.3 132 61.4
Eucgr.J00600 Eucalyptus grandis HOM05D007267 ORTHO05D009053 6.1e-34 147.9 132 60.6
Gohir.D11G012400 Gossypium hirsutum HOM05D007267 ORTHO05D009053 8.0e-34 147.5 132 62.9
PGSC0003DMG400013132 Solanum tuberosum HOM05D007267 ORTHO05D009053 1.0e-33 147.1 132 61.4
Gorai.007G016000 Gossypium raimondii HOM05D007267 ORTHO05D009053 1.4e-33 146.7 132 62.9
Psat5g107600 Pisum sativum HOM05D007267 ORTHO05D009053 1.4e-33 146.7 129 59.7
Actinidia22464 Actinidia chinensis HOM05D007267 ORTHO05D009053 4.0e-33 145.2 100 71.0
ClCG02G024060 Citrullus lanatus HOM05D007267 ORTHO05D009053 5.2e-33 144.8 130 56.2
RcHm_v2.0_Chr5g0049391 Rosa chinensis HOM05D007267 ORTHO05D009053 5.2e-33 144.8 129 61.2
Migut.N02428 Erythranthe guttata HOM05D007267 ORTHO05D009053 6.8e-33 144.4 134 61.9
Solyc01g009245.1 Solanum lycopersicum HOM05D007267 ORTHO05D009053 1.2e-32 143.7 130 62.3
EL10Ac7g16252 Beta vulgaris HOM05D007267 ORTHO05D009053 1.5e-32 143.3 139 59.7
Cfa019700 Carpinus fangiana HOM05D007267 ORTHO05D009053 1.5e-32 143.3 136 60.3
Cfa019701 Carpinus fangiana HOM05D007267 ORTHO05D009053 1.5e-32 143.3 136 60.3
CAN.G226.32 Capsicum annuum HOM05D007267 ORTHO05D009053 2.0e-32 142.9 132 60.6
FAN25G2009 Fragaria x ananassa HOM05D007267 ORTHO05D009053 2.0e-32 142.9 131 61.1
vmacro14300 Vaccinium macrocarpon HOM05D007267 ORTHO05D009053 2.0e-32 142.9 137 60.6
Sopen01g004730 Solanum pennellii HOM05D007267 ORTHO05D009053 3.4e-32 142.1 130 60.8
GSVIVG01037512001 Vitis vinifera HOM05D007267 ORTHO05D009053 4.4e-32 141.7 129 64.3
Phvul.006G014400 Phaseolus vulgaris HOM05D007267 ORTHO05D009053 5.8e-32 141.4 108 67.6
PSO384G0574 Papaver somniferum HOM05D007267 ORTHO05D009053 7.5e-32 141.0 132 55.3
CANSAT54G0135 Cannabis sativa HOM05D007267 ORTHO05D009053 9.8e-32 140.6 136 53.7
PSO339G2642 Papaver somniferum HOM05D007267 ORTHO05D009053 9.8e-32 140.6 132 55.3
Cc05_g03630 Coffea canephora HOM05D007267 ORTHO05D009053 2.2e-31 139.4 76 85.5
MELO3C014688.2 Cucumis melo HOM05D007267 ORTHO05D009053 6.4e-31 137.9 134 54.5
Hma1.2p1_0218F.1_g092330 Hydrangea macrophylla HOM05D007267 ORTHO05D009053 6.4e-31 137.9 77 88.3
Aa31LG1G13830 Aethionema arabicum HOM05D007267 ORTHO05D009053 1.1e-30 137.1 73 83.6
BcaC03g13815 Brassica carinata HOM05D007267 ORTHO05D009053 1.9e-30 136.3 77 81.8
BcaNung05756 Brassica carinata HOM05D007267 ORTHO05D009053 1.9e-30 136.3 75 82.7
A03p10350 Brassica napus HOM05D007267 ORTHO05D009053 1.9e-30 136.3 75 82.7
C03p11890 Brassica napus HOM05D007267 ORTHO05D009053 1.9e-30 136.3 75 82.7
BolC3t13659H Brassica oleracea HOM05D007267 ORTHO05D009053 1.9e-30 136.3 75 82.7
PGR119G2323 Punica granatum HOM05D007267 ORTHO05D009053 1.9e-30 136.3 135 57.8
FAN11G1992 Fragaria x ananassa HOM05D007267 ORTHO05D009053 2.4e-30 136.0 130 60.0
AL6G32500 Arabidopsis lyrata HOM05D007267 ORTHO05D009053 3.2e-30 135.6 74 82.4
AT5G20935 Arabidopsis thaliana HOM05D007267 ORTHO05D009053 3.2e-30 135.6 74 82.4
BraA03t10347Z Brassica rapa HOM05D007267 ORTHO05D009053 3.2e-30 135.6 75 82.7
Carub.0006s1925 Capsella rubella HOM05D007267 ORTHO05D009053 3.2e-30 135.6 74 82.4
BolC2t07084H Brassica oleracea HOM05D007267 ORTHO05D009053 4.1e-30 135.2 75 82.7
CsaV3_4G023270 Cucumis sativus L. HOM05D007267 ORTHO05D009053 4.1e-30 135.2 114 58.8
Lsat_1_v5_gn_4_124761 Lactuca sativa HOM05D007267 ORTHO05D009053 4.1e-30 135.2 93 72.0
CARHR191910 Cardamine hirsuta HOM05D007267 ORTHO05D009053 5.4e-30 134.8 74 81.1
Thhalv10015046m.g Eutrema salsugineum HOM05D007267 ORTHO05D009053 5.4e-30 134.8 75 82.7
C02p10530 Brassica napus HOM05D007267 ORTHO05D009053 7.0e-30 134.4 75 80.0
BraA02t05605Z Brassica rapa HOM05D007267 ORTHO05D009053 7.0e-30 134.4 75 80.0
VMungo0540G2312 Vigna mungo HOM05D007267 ORTHO05D009053 7.0e-30 134.4 132 56.1
Atru.chr3.3040 Acer truncatum HOM05D007267 ORTHO05D009053 9.2e-30 134.0 111 61.3
Aqoxy2G00618 Aquilegia oxysepala HOM05D007267 ORTHO05D009053 9.2e-30 134.0 90 75.6
BcaB05g22800 Brassica carinata HOM05D007267 ORTHO05D009053 9.2e-30 134.0 75 81.3
Duzib168G2107 Durio zibethinus HOM05D004779 ORTHO05D005737 1.6e-29 133.3 101 66.3
Rhsim01G0198000 Rhododendron simsii HOM05D007267 ORTHO05D009053 1.6e-29 133.3 163 51.5
CSS0044664 Camellia sinensis var. sinensis HOM05D004779 ORTHO05D005737 2.7e-29 132.5 74 83.8
SalBow3G2700 Salvia bowleyana HOM05D007267 ORTHO05D009053 3.5e-29 132.1 101 69.3
Ah.15g099120 Amaranthus hybridus HOM05D007267 ORTHO05D009053 4.6e-29 131.7 104 63.5
THA.LOC104799596 Tarenaya hassleriana HOM05D007267 ORTHO05D009053 7.8e-29 131.0 103 59.2
HanXRQChr09g0268081 Helianthus annuus HOM05D007267 ORTHO05D009053 1.0e-28 130.6 70 85.7
arahy.Tifrunner.gnm1.ann1.SB69IV Arachis hypogaea HOM05D007267 ORTHO05D009053 1.7e-28 129.8 134 55.2
Gohir.A11G015400 Gossypium hirsutum HOM05D007267 ORTHO05D009053 1.7e-28 129.8 120 61.7
Cpa.g.sc103.55 Carica papaya HOM05D007267 ORTHO05D009053 3.9e-28 128.6 74 78.4
TWI31G1096 Tripterygium wilfordii HOM05D007267 ORTHO05D009053 3.9e-28 128.6 70 82.9
unitig_8.g2981 Utricularia gibba HOM05D007267 ORTHO05D009053 8.6e-28 127.5 90 68.9
Sed0001981 Sechium edule HOM05D007267 ORTHO05D009053 4.3e-27 125.2 122 52.5
ATR0697G260 Amborella trichopoda HOM05D007267 ORTHO05D009053 3.6e-26 122.1 96 60.4
Zm00001eb015220 Zea mays HOM05D007267 ORTHO05D009053 1.5e-24 116.7 97 55.7
Medtr3g079783 Medicago truncatula HOM05D000005 ORTHO05D000294 1.7e-23 113.2 99 63.6
SEGI_22571 Sequoiadendron giganteum HOM05D007267 ORTHO05D009053 4.9e-23 111.7 143 42.7
CDE07G1374 Ceratophyllum demersum HOM05D004582 ORTHO05D005507 6.4e-23 111.3 124 53.2
Sed0001742 Sechium edule HOM05D007267 ORTHO05D009053 6.0e-21 104.8 70 70.0
ECA232G2859 Erigeron canadensis HOM05D000436 ORTHO05D008174 1.0e-20 104.0 115 54.8
Mapoly0146s0012 Marchantia polymorpha HOM05D007267 ORTHO05D009053 1.0e-20 104.0 85 56.5
Pp3c3_19300 Physcomitrium patens HOM05D007267 ORTHO05D009053 1.0e-20 104.0 132 42.4
Aqoxy51s004 Aquilegia oxysepala HOM05D007267 ORTHO05D009053 3.0e-20 102.4 56 82.1
AagrBONN_evm.TU.Sc2ySwM_117.833 Anthoceros agrestis HOM05D007267 ORTHO05D009053 5.1e-20 101.7 69 59.4
SMO367G0148 Selaginella moellendorffii HOM05D007267 ORTHO05D009053 4.3e-19 98.6 64 64.1
CBR_g51378 Chara braunii HOM05D007267 ORTHO05D009053 2.6e-16 89.4 69 52.2
arahy.Tifrunner.gnm1.ann1.69KWVE Arachis hypogaea HOM05D007267 ORTHO05D009053 3.4e-16 89.0 86 55.8
arahy.Tifrunner.gnm1.ann1.BBFR3C Arachis hypogaea HOM05D003566 ORTHO05D009053 1.2e-13 80.5 69 59.4
MBI11_g25049_MAGBIO Magnolia biondii HOM05D007267 ORTHO05D009053 2.1e-10 69.7 39 76.9
Nitab4.5_0000157g0140 Nicotiana tabacum HOM05D007267 ORTHO05D009053 3.6e-10 68.9 37 86.5
Lsat_1_v5_gn_6_53880 Lactuca sativa HOM05D007267 ORTHO05D009053 7.6e-08 61.2 58 53.4
Lsat_1_v5_gn_5_53160 Lactuca sativa HOM05D007267 ORTHO05D009053 1.3e-07 60.5 88 43.2
Os07g0164200 Oryza sativa ssp. japonica HOM05D007267 ORTHO05D009053 1.3e-07 60.5 69 46.4
arahy.Tifrunner.gnm1.ann1.RKVJ8T Arachis hypogaea HOM05D007267 ORTHO05D009053 1.1e-06 57.4 32 81.2


User provided reference genes

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