Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv32110 Davidia involucrata HOM05D007091 ORTHO05D008768 2.4e-145 518.8 265 100.0
Dinv01447 Davidia involucrata HOM05D007091 ORTHO05D008768 5.1e-132 474.6 259 93.1
Hma1.2p1_0844F.1_g227450 Hydrangea macrophylla HOM05D007091 ORTHO05D008768 4.2e-102 375.2 263 76.8
QL09p036643 Quercus lobata HOM05D007091 ORTHO05D008768 1.8e-97 359.8 252 74.6
CSS0046666 Camellia sinensis var. sinensis HOM05D007091 ORTHO05D008768 1.5e-94 350.1 262 73.7
vmacro18668 Vaccinium macrocarpon HOM05D007091 ORTHO05D008768 4.2e-94 348.6 259 71.0
FvH4_5g17800 Fragaria vesca HOM05D007091 ORTHO05D008768 3.0e-92 342.4 259 69.1
FAN13G0023 Fragaria x ananassa HOM05D007091 ORTHO05D008768 8.9e-92 340.9 259 68.7
Potri.012G041400 Populus trichocarpa HOM05D007091 ORTHO05D008768 8.9e-92 340.9 261 69.0
Prupe.5G238600 Prunus persica HOM05D007091 ORTHO05D008768 1.5e-91 340.1 260 67.7
RcHm_v2.0_Chr7g0177781 Rosa chinensis HOM05D007091 ORTHO05D008768 1.5e-91 340.1 240 72.5
Nn4g24542 Nelumbo nucifera HOM05D007091 ORTHO05D008768 2.0e-91 339.7 260 68.5
Cfa020656 Carpinus fangiana HOM05D007091 ORTHO05D008768 2.6e-91 339.3 259 68.0
MD06G1234100 Malus domestica HOM05D007091 ORTHO05D008768 3.4e-91 339.0 261 68.2
CiPaw.15G149800 Carya illinoinensis HOM05D007091 ORTHO05D008768 7.5e-91 337.8 259 68.7
Actinidia34668 Actinidia chinensis HOM05D007091 ORTHO05D008768 6.3e-90 334.7 247 71.3
Eucgr.H00567 Eucalyptus grandis HOM05D007091 ORTHO05D008768 1.8e-89 333.2 260 67.7
GSVIVG01000383001 Vitis vinifera HOM05D007091 ORTHO05D008768 3.1e-89 332.4 256 68.0
TAR629G3120 Trochodendron aralioides HOM05D007091 ORTHO05D008768 9.2e-89 330.9 240 70.4
Sabra12G0028500 Salix brachista HOM05D007091 ORTHO05D008768 1.7e-87 326.6 259 67.2
Aqoxy3G04057 Aquilegia oxysepala HOM05D007091 ORTHO05D008768 6.6e-87 324.7 244 68.0
Ciclev10026363m.g Citrus clementina HOM05D007091 ORTHO05D008768 3.3e-86 322.4 248 69.4
TWI15G0826 Tripterygium wilfordii HOM05D007091 ORTHO05D008768 5.6e-86 321.6 250 68.8
Atru.chr9.1636 Acer truncatum HOM05D007091 ORTHO05D008768 3.6e-85 318.9 243 69.1
Lalb_Chr22g0353631 Lupinus albus HOM05D007091 ORTHO05D008768 6.1e-85 318.2 260 64.2
TPR.G31708 Trifolium pratense HOM05D007091 ORTHO05D008768 1.4e-84 317.0 251 66.1
CDE07G0316 Ceratophyllum demersum HOM05D007091 ORTHO05D008768 4.4e-83 312.0 239 64.9
Manes.14G173700 Manihot esculenta HOM05D007091 ORTHO05D008768 5.8e-83 311.6 239 68.6
MD14G1240800 Malus domestica HOM05D007091 ORTHO05D008768 9.8e-83 310.8 229 71.6
Peaxi162Scf01064g00022 Petunia axillaris HOM05D007091 ORTHO05D008768 9.2e-81 304.3 248 64.5
Glyma.09G170700 Glycine max HOM05D007091 ORTHO05D008768 1.6e-80 303.5 255 62.7
arahy.Tifrunner.gnm1.ann1.0PBM2M Arachis hypogaea HOM05D007091 ORTHO05D008768 4.6e-80 302.0 249 63.9
Ca_20293_v3 Cicer arietinum L. HOM05D007091 ORTHO05D008768 7.8e-80 301.2 252 63.1
FAN04G2000 Fragaria x ananassa HOM05D007091 ORTHO05D008768 1.7e-79 300.1 236 68.2
Duzib264G1108 Durio zibethinus HOM05D007091 ORTHO05D008768 3.0e-79 299.3 250 64.8
CANSAT35G2054 Cannabis sativa HOM05D007091 ORTHO05D008768 3.9e-79 298.9 266 59.8
Thecc.03G065800 Theobroma cacao HOM05D007091 ORTHO05D008768 1.9e-78 296.6 246 66.3
VMungo0464G0064 Vigna mungo HOM05D007091 ORTHO05D008768 2.5e-78 296.2 247 62.8
Cc04_g09250 Coffea canephora HOM05D007091 ORTHO05D008768 3.3e-78 295.8 244 65.2
Gohir.D11G227400 Gossypium hirsutum HOM05D007091 ORTHO05D008768 1.2e-77 293.9 243 64.2
CAN.G65.99 Capsicum annuum HOM05D007091 ORTHO05D008768 1.6e-77 293.5 252 62.3
Lsat_1_v5_gn_2_11841 Lactuca sativa HOM05D007091 ORTHO05D008768 2.1e-77 293.1 247 63.2
Gohir.A11G233700 Gossypium hirsutum HOM05D007091 ORTHO05D008768 2.8e-77 292.7 244 64.3
Nitab4.5_0000033g0140 Nicotiana tabacum HOM05D007091 ORTHO05D008768 3.6e-77 292.4 260 61.5
Sopen06g028870 Solanum pennellii HOM05D007091 ORTHO05D008768 3.6e-77 292.4 261 61.3
Gorai.007G246600 Gossypium raimondii HOM05D007091 ORTHO05D008768 4.7e-77 292.0 243 63.4
COL.COLO4_24457 Corchorus olitorius HOM05D007091 ORTHO05D008768 1.4e-76 290.4 243 65.0
Solyc06g072500.2 Solanum lycopersicum HOM05D007091 ORTHO05D008768 1.8e-76 290.0 261 60.9
Medtr6g072100 Medicago truncatula HOM05D007091 ORTHO05D008768 2.3e-76 289.7 259 59.8
Lj2g0019861 Lotus japonicus HOM05D007091 ORTHO05D008768 3.1e-76 289.3 245 62.9
arahy.Tifrunner.gnm1.ann1.M1K315 Arachis hypogaea HOM05D007091 ORTHO05D008768 4.0e-76 288.9 236 63.6
MELO3C001924.2 Cucumis melo HOM05D007091 ORTHO05D008768 4.0e-76 288.9 268 56.3
Nitab4.5_0005533g0060 Nicotiana tabacum HOM05D007091 ORTHO05D008768 6.8e-76 288.1 260 60.4
Haze_18937 Corylus avellana HOM05D007091 ORTHO05D008768 2.0e-75 286.6 227 67.0
Sc10g0009000 Simmondsia chinensis HOM05D007091 ORTHO05D008768 2.6e-75 286.2 248 62.5
ClCG04G012810 Citrullus lanatus HOM05D007091 ORTHO05D008768 6.4e-74 281.6 252 58.7
DCAR_004559 Daucus carota HOM05D007091 ORTHO05D009263 1.1e-73 280.8 256 59.8
Os05g0387800 Oryza sativa ssp. japonica HOM05D007091 ORTHO05D008768 1.4e-73 280.4 252 58.7
SEGI_35239 Sequoiadendron giganteum HOM05D007091 ORTHO05D008768 1.9e-73 280.0 244 62.3
Migut.I00575 Erythranthe guttata HOM05D007091 ORTHO05D008768 1.6e-72 276.9 247 61.9
HanXRQChr06g0179681 Helianthus annuus HOM05D007091 ORTHO05D008768 7.8e-72 274.6 243 60.5
CsaV3_1G004900 Cucumis sativus L. HOM05D007091 ORTHO05D008768 6.6e-71 271.6 268 54.5
Psat1g124480 Pisum sativum HOM05D007091 ORTHO05D008768 4.0e-68 262.3 206 66.5
Atru.chr9.1624 Acer truncatum HOM05D007091 ORTHO05D008768 2.2e-66 256.5 207 67.1
SEGI_03292 Sequoiadendron giganteum HOM05D007091 ORTHO05D008768 2.2e-66 256.5 246 58.9
ATR0598G099 Amborella trichopoda HOM05D007091 ORTHO05D008768 4.9e-66 255.4 200 66.0
HPP92_007322 Vanilla planifolia HOM05D007091 ORTHO05D008768 1.9e-65 253.4 243 59.3
Aa31LG7G2780 Aethionema arabicum HOM05D007091 ORTHO05D008768 1.6e-64 250.4 239 57.3
AL1G30710 Arabidopsis lyrata HOM05D007091 ORTHO05D008768 2.1e-64 250.0 239 57.7
EL10Ac1g00193 Beta vulgaris HOM05D007091 ORTHO05D008768 2.1e-64 250.0 194 65.5
AT1G18335 Arabidopsis thaliana HOM05D007091 ORTHO05D008768 1.3e-63 247.3 240 57.9
PSO421G0160 Papaver somniferum HOM05D007091 ORTHO05D008768 1.3e-63 247.3 238 59.2
Mapoly0049s0094 Marchantia polymorpha HOM05D007091 ORTHO05D008768 1.7e-63 246.9 253 53.4
C08p18530 Brassica napus HOM05D007091 ORTHO05D008768 8.6e-63 244.6 238 57.1
Thhalv10008624m.g Eutrema salsugineum HOM05D007091 ORTHO05D008768 1.1e-62 244.2 239 57.7
BcaC07g38895 Brassica carinata HOM05D007091 ORTHO05D008768 1.5e-62 243.8 239 56.9
BolC8t49485H Brassica oleracea HOM05D007091 ORTHO05D008768 1.5e-62 243.8 238 56.7
Zm00001eb256360 Zea mays HOM05D007091 ORTHO05D008768 1.9e-62 243.4 217 61.8
BraA08t34976Z Brassica rapa HOM05D007091 ORTHO05D008768 4.3e-62 242.3 238 57.1
SMO347G0535 Selaginella moellendorffii HOM05D007091 ORTHO05D008768 9.5e-62 241.1 234 58.5
PSO384G3314 Papaver somniferum HOM05D007091 ORTHO05D008768 2.1e-61 240.0 240 58.8
Sp1g16300 Schrenkiella parvula HOM05D007091 ORTHO05D008768 2.1e-61 240.0 258 54.7
A08p30440 Brassica napus HOM05D007091 ORTHO05D008768 3.6e-61 239.2 259 54.4
CARHR018920 Cardamine hirsuta HOM05D007091 ORTHO05D008768 1.1e-60 237.7 238 56.3
BcaB03g12975 Brassica carinata HOM05D007091 ORTHO05D008768 3.1e-60 236.1 242 55.4
Oeu058744.1 Olea europaea HOM05D007091 ORTHO05D008768 8.9e-60 234.6 181 68.0
Carub.0001s1796 Capsella rubella HOM05D007091 ORTHO05D008768 3.4e-59 232.6 240 55.8
Phvul.004G146400 Phaseolus vulgaris HOM05D007091 ORTHO05D008768 9.9e-59 231.1 188 64.4
Os02g0772300 Oryza sativa ssp. japonica HOM05D007091 ORTHO05D008768 8.4e-58 228.0 201 58.2
BcaNung05442 Brassica carinata HOM05D005614 ORTHO05D006759 3.2e-57 226.1 237 55.3
SGA_v2.0_scaffold40G15610 Striga asiatica HOM05D007091 ORTHO05D008768 4.6e-56 222.2 197 59.9
Hund27153 Selenicereus undatus HOM05D007091 ORTHO05D008768 1.3e-55 220.7 250 50.8
MSTRG.11241 Avicennia marina HOM05D007091 ORTHO05D008768 5.6e-54 215.3 173 64.2
AUR62022670 Chenopodium quinoa HOM05D007091 ORTHO05D008768 8.1e-53 211.5 175 64.6
Pp3c17_14350 Physcomitrium patens HOM05D007091 ORTHO05D008768 1.1e-52 211.1 203 56.7
AUR62004555 Chenopodium quinoa HOM05D007091 ORTHO05D008768 9.0e-52 208.0 175 62.9
SHI19106 Sapria himalayana HOM05D007091 ORTHO05D008768 1.4e-49 200.7 169 63.3
ECA238G0701 Erigeron canadensis HOM05D007091 ORTHO05D008768 2.1e-48 196.8 175 63.4
Sed0004344 Sechium edule HOM05D007091 ORTHO05D008768 3.5e-48 196.1 200 52.5
AagrBONN_evm.TU.Sc2ySwM_228.1246 Anthoceros agrestis HOM05D007091 ORTHO05D008768 4.6e-48 195.7 206 48.5
Pp3c9_11360 Physcomitrium patens HOM05D000137 ORTHO05D000382 4.3e-46 189.1 248 46.8
Lj9P415T25 Lonicera japonica HOM05D007091 ORTHO05D008768 1.8e-44 183.7 134 69.4
Pp3c15_11610 Physcomitrium patens HOM05D000137 ORTHO05D008768 4.2e-41 172.6 258 41.5
PGSC0003DMG401027044 Solanum tuberosum HOM05D007091 ORTHO05D008768 7.1e-41 171.8 157 57.3
MCO05G578 Micromonas commoda HOM05D007091 ORTHO05D008768 1.4e-33 147.5 251 39.4
CBR_g40646 Chara braunii HOM05D007091 ORTHO05D008768 2.3e-31 140.2 379 30.1
unitig_21.g20331 Utricularia gibba HOM05D007091 ORTHO05D008768 5.8e-27 125.6 140 51.4
BcaC03g18194 Brassica carinata HOM05D007091 ORTHO05D008768 1.4e-25 120.9 124 52.4
TWI81G1026 Tripterygium wilfordii HOM05D007091 ORTHO05D008768 1.3e-23 114.4 137 51.1
C02p62570 Brassica napus HOM05D001735 ORTHO05D001640 7.7e-19 98.6 73 69.9
BolC2t12316H Brassica oleracea HOM05D007091 ORTHO05D008768 2.7e-16 90.1 94 52.1
PSO832G1393 Papaver somniferum HOM05D007091 ORTHO05D008768 2.3e-15 87.0 93 55.9
MCO07G264 Micromonas commoda HOM05D007091 ORTHO05D008768 9.1e-12 75.1 143 33.6
MCO15G558 Micromonas commoda HOM05D007091 ORTHO05D008768 1.9e-09 67.4 218 26.6
C09p32190 Brassica napus HOM05D004766 ORTHO05D008768 5.5e-09 65.9 86 47.7
BolC1t04291H Brassica oleracea HOM05D004766 ORTHO05D008768 1.6e-08 64.3 73 49.3
Cre10.g431450 Chlamydomonas reinhardtii HOM05D007091 ORTHO05D008768 6.1e-08 62.4 167 28.1
A06p41130 Brassica napus HOM05D000061 ORTHO05D000050 1.8e-07 60.8 79 46.8
BraA06t27036Z Brassica rapa HOM05D000061 ORTHO05D000050 1.8e-07 60.8 79 46.8
BcaC04g23924 Brassica carinata HOM05D004766 ORTHO05D039973 7.4e-06 55.5 70 44.3


User provided reference genes

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