Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv32019 Davidia involucrata HOM05D006056 ORTHO05D007136 6.1e-39 163.7 83 100.0
CSS0027846 Camellia sinensis var. sinensis HOM05D006056 ORTHO05D007136 6.3e-28 127.1 69 88.4
Dinv44692 Davidia involucrata HOM05D006056 ORTHO05D007136 6.3e-28 127.1 69 89.9
Eucgr.G03224 Eucalyptus grandis HOM05D006056 ORTHO05D007136 1.1e-27 126.3 69 87.0
Actinidia06230 Actinidia chinensis HOM05D006056 ORTHO05D007136 1.4e-27 125.9 69 88.4
CAN.G1045.19 Capsicum annuum HOM05D006056 ORTHO05D007136 1.8e-27 125.6 69 87.0
HanXRQChr11g0341201 Helianthus annuus HOM05D006056 ORTHO05D007136 1.8e-27 125.6 69 87.0
Migut.B01239 Erythranthe guttata HOM05D006056 ORTHO05D007136 2.4e-27 125.2 69 85.5
Actinidia10152 Actinidia chinensis HOM05D006056 ORTHO05D007136 3.1e-27 124.8 69 87.0
Ciclev10002629m.g Citrus clementina HOM05D006056 ORTHO05D007136 3.1e-27 124.8 69 88.4
Nitab4.5_0005808g0070 Nicotiana tabacum HOM05D006056 ORTHO05D007136 3.1e-27 124.8 69 87.0
PGR044G1154 Punica granatum HOM05D006056 ORTHO05D007136 3.1e-27 124.8 69 85.5
GSVIVG01036664001 Vitis vinifera HOM05D006056 ORTHO05D007136 3.1e-27 124.8 69 88.4
Hma1.2p1_0837F.1_g226040 Hydrangea macrophylla HOM05D006056 ORTHO05D007136 4.1e-27 124.4 68 88.2
vmacro13759 Vaccinium macrocarpon HOM05D006056 ORTHO05D007136 5.3e-27 124.0 71 83.1
arahy.Tifrunner.gnm1.ann1.6DS776 Arachis hypogaea HOM05D006056 ORTHO05D007136 7.0e-27 123.6 69 84.1
arahy.Tifrunner.gnm1.ann1.X1BBAM Arachis hypogaea HOM05D006056 ORTHO05D007136 7.0e-27 123.6 69 84.1
A05p41340 Brassica napus HOM05D006056 ORTHO05D007136 7.0e-27 123.6 69 85.5
BolC5t34710H Brassica oleracea HOM05D006056 ORTHO05D007136 7.0e-27 123.6 69 85.5
BraA05t22856Z Brassica rapa HOM05D006056 ORTHO05D007136 7.0e-27 123.6 69 85.5
CARHR081330 Cardamine hirsuta HOM05D006056 ORTHO05D007136 7.0e-27 123.6 69 85.5
EL10Ac2g02787 Beta vulgaris HOM05D006056 ORTHO05D007136 1.2e-26 122.9 69 84.1
C05p60560 Brassica napus HOM05D006056 ORTHO05D007136 1.2e-26 122.9 69 85.5
Haze_03016 Corylus avellana HOM05D006056 ORTHO05D007136 1.2e-26 122.9 69 85.5
Haze_03023 Corylus avellana HOM05D006056 ORTHO05D007136 1.2e-26 122.9 69 85.5
DCAR_031839 Daucus carota HOM05D006056 ORTHO05D007136 1.2e-26 122.9 66 89.4
CANSAT56G1604 Cannabis sativa HOM05D006056 ORTHO05D007136 1.6e-26 122.5 69 87.0
Peaxi162Scf00082g00120 Petunia axillaris HOM05D006056 ORTHO05D007136 1.6e-26 122.5 69 84.1
THA.LOC104826732 Tarenaya hassleriana HOM05D006056 ORTHO05D007136 1.6e-26 122.5 69 85.5
AL3G17840 Arabidopsis lyrata HOM05D006056 ORTHO05D007136 2.0e-26 122.1 69 84.1
AT3G06730 Arabidopsis thaliana HOM05D006056 ORTHO05D007136 2.0e-26 122.1 69 84.1
BNapus_Darmor_BZH_scaffold_117p00040 Brassica napus HOM05D006056 ORTHO05D007136 2.0e-26 122.1 69 85.5
BraA01t04419Z Brassica rapa HOM05D006056 ORTHO05D007136 2.0e-26 122.1 69 85.5
Carub.0003s0627 Capsella rubella HOM05D006056 ORTHO05D007136 2.0e-26 122.1 69 85.5
Thhalv10021607m.g Eutrema salsugineum HOM05D006056 ORTHO05D007136 2.0e-26 122.1 69 84.1
Lj9A658G61 Lonicera japonica HOM05D006056 ORTHO05D007136 2.0e-26 122.1 69 84.1
Nn2g14790 Nelumbo nucifera HOM05D006056 ORTHO05D007136 2.0e-26 122.1 69 84.1
Nitab4.5_0003481g0070 Nicotiana tabacum HOM05D006056 ORTHO05D007136 2.6e-26 121.7 69 85.5
BcaC05g30553 Brassica carinata HOM05D006056 ORTHO05D007136 3.5e-26 121.3 69 84.1
BolC1t05590H Brassica oleracea HOM05D006056 ORTHO05D007136 3.5e-26 121.3 69 82.6
BcaC09g47915 Brassica carinata HOM05D006056 ORTHO05D007136 4.5e-26 120.9 69 81.2
CiPaw.13G014800 Carya illinoinensis HOM05D006056 ORTHO05D007136 4.5e-26 120.9 69 85.5
Potri.001G028500 Populus trichocarpa HOM05D006056 ORTHO05D007136 4.5e-26 120.9 69 82.6
Thecc.10G150600 Theobroma cacao HOM05D006056 ORTHO05D007136 4.5e-26 120.9 69 82.6
TAR633G2798 Trochodendron aralioides HOM05D006056 ORTHO05D007136 4.5e-26 120.9 66 87.9
Ca_12968_v3 Cicer arietinum L. HOM05D006056 ORTHO05D007136 5.9e-26 120.6 69 84.1
Solyc01g096480.2 Solanum lycopersicum HOM05D006056 ORTHO05D007136 5.9e-26 120.6 69 84.1
Sopen01g040210 Solanum pennellii HOM05D006056 ORTHO05D007136 5.9e-26 120.6 69 84.1
ClCG08G010680 Citrullus lanatus HOM05D006056 ORTHO05D007136 7.7e-26 120.2 69 81.2
COL.COLO4_20678 Corchorus olitorius HOM05D006056 ORTHO05D007136 7.7e-26 120.2 69 82.6
CsaV3_6G035850 Cucumis sativus L. HOM05D006056 ORTHO05D007136 7.7e-26 120.2 69 81.2
Gohir.A10G186600 Gossypium hirsutum HOM05D006056 ORTHO05D007136 7.7e-26 120.2 69 81.2
Lalb_Chr01g0014891 Lupinus albus HOM05D006056 ORTHO05D007136 7.7e-26 120.2 69 84.1
Sp3g05700 Schrenkiella parvula HOM05D006056 ORTHO05D007136 7.7e-26 120.2 69 82.6
TPR.G1448 Trifolium pratense HOM05D006056 ORTHO05D007136 7.7e-26 120.2 69 84.1
Atru.chr12.1257 Acer truncatum HOM05D006056 ORTHO05D007136 1.0e-25 119.8 69 81.2
Psat5g221760 Pisum sativum HOM05D006056 ORTHO05D007136 1.0e-25 119.8 69 84.1
SGA_v2.0_scaffold124G33607 Striga asiatica HOM05D006056 ORTHO05D007136 1.0e-25 119.8 69 79.7
Lsat_1_v5_gn_9_40260 Lactuca sativa HOM05D006056 ORTHO05D007136 1.3e-25 119.4 68 82.4
Medtr1g037680 Medicago truncatula HOM05D006056 ORTHO05D007136 1.3e-25 119.4 69 84.1
TWI38G2317 Tripterygium wilfordii HOM05D006056 ORTHO05D007136 1.3e-25 119.4 69 82.6
Cc08_g11260 Coffea canephora HOM05D006056 ORTHO05D007136 1.7e-25 119.0 69 82.6
Lj3g0018945 Lotus japonicus HOM05D006056 ORTHO05D007136 1.7e-25 119.0 69 82.6
Lalb_Chr04g0264131 Lupinus albus HOM05D006056 ORTHO05D007136 1.7e-25 119.0 69 82.6
Nn7g36738 Nelumbo nucifera HOM05D006056 ORTHO05D007136 2.2e-25 118.6 66 86.4
Prupe.2G039200 Prunus persica HOM05D006056 ORTHO05D007136 2.2e-25 118.6 69 81.2
PGSC0003DMG400005407 Solanum tuberosum HOM05D006056 ORTHO05D007136 2.2e-25 118.6 69 82.6
Sed0016890 Sechium edule HOM05D006056 ORTHO05D007136 2.9e-25 118.2 69 79.7
Cpa.g.sc2293.2 Carica papaya HOM05D006056 ORTHO05D007136 5.0e-25 117.5 69 79.7
MELO3C011393.2 Cucumis melo HOM05D006056 ORTHO05D007136 5.0e-25 117.5 71 80.3
Manes.04G158100 Manihot esculenta HOM05D006056 ORTHO05D007136 5.0e-25 117.5 69 81.2
CDE05G0697 Ceratophyllum demersum HOM05D006056 ORTHO05D007136 6.5e-25 117.1 66 84.8
Duzib106G1426 Durio zibethinus HOM05D006056 ORTHO05D007136 8.5e-25 116.7 68 79.4
Gohir.D10G193500 Gossypium hirsutum HOM05D006056 ORTHO05D007136 8.5e-25 116.7 69 78.3
Gorai.011G216600 Gossypium raimondii HOM05D006056 ORTHO05D007136 8.5e-25 116.7 69 78.3
MBI13_g23031_MAGBIO Magnolia biondii HOM05D006056 ORTHO05D007136 8.5e-25 116.7 66 84.8
Rhsim07G0067800 Rhododendron simsii HOM05D006056 ORTHO05D007136 8.5e-25 116.7 69 76.8
Sabra01G0020900 Salix brachista HOM05D006056 ORTHO05D007136 8.5e-25 116.7 81 70.4
MSTRG.16982 Avicennia marina HOM05D006056 ORTHO05D007136 1.1e-24 116.3 69 79.7
Aa31LG5G17320 Aethionema arabicum HOM05D006056 ORTHO05D007136 1.5e-24 115.9 69 79.7
MD07G1048800 Malus domestica HOM05D006056 ORTHO05D007136 1.5e-24 115.9 69 81.2
Duzib106G1601 Durio zibethinus HOM05D006056 ORTHO05D007136 1.9e-24 115.5 68 77.9
Phvul.005G025600 Phaseolus vulgaris HOM05D006056 ORTHO05D007136 1.9e-24 115.5 69 78.3
QL04p017566 Quercus lobata HOM05D006056 ORTHO05D007136 1.9e-24 115.5 68 77.9
RcHm_v2.0_Chr1g0325731 Rosa chinensis HOM05D006056 ORTHO05D007136 1.9e-24 115.5 69 78.3
Aqoxy1G00370 Aquilegia oxysepala HOM05D006056 ORTHO05D007136 2.5e-24 115.2 69 84.1
CiPaw.14G008500 Carya illinoinensis HOM05D006056 ORTHO05D007136 2.5e-24 115.2 69 81.2
Duzib114G0422 Durio zibethinus HOM05D006056 ORTHO05D007136 2.5e-24 115.2 69 79.7
unitig_736.g22224 Utricularia gibba HOM05D006056 ORTHO05D007136 2.5e-24 115.2 66 83.3
FAN03G2563 Fragaria x ananassa HOM05D006056 ORTHO05D007136 3.2e-24 114.8 69 79.7
FAN10G2490 Fragaria x ananassa HOM05D006056 ORTHO05D007136 3.2e-24 114.8 69 79.7
MD02G1283300 Malus domestica HOM05D006056 ORTHO05D007136 3.2e-24 114.8 69 81.2
Duzib106G0937 Durio zibethinus HOM05D006056 ORTHO05D007136 4.2e-24 114.4 68 77.9
Glyma.11G156500 Glycine max HOM05D006056 ORTHO05D007136 4.2e-24 114.4 66 80.3
FAN01G1581 Fragaria x ananassa HOM05D006056 ORTHO05D007136 1.2e-23 112.8 69 79.7
Os08g0378900 Oryza sativa ssp. japonica HOM05D006056 ORTHO05D007136 1.2e-23 112.8 69 78.3
Hund13373 Selenicereus undatus HOM05D006056 ORTHO05D007136 1.6e-23 112.5 69 76.8
FvH4_7g03410 Fragaria vesca HOM05D006056 ORTHO05D007136 2.7e-23 111.7 69 78.3
Glyma.04G135300 Glycine max HOM05D006056 ORTHO05D007136 2.7e-23 111.7 66 80.3
PSO339G3509 Papaver somniferum HOM05D006056 ORTHO05D007136 1.0e-22 109.8 69 76.8
FAN06G0497 Fragaria x ananassa HOM05D006056 ORTHO05D007136 3.0e-22 108.2 69 75.4
PSO384G1577 Papaver somniferum HOM05D006056 ORTHO05D007136 5.2e-22 107.5 69 75.4
ATR0782G243 Amborella trichopoda HOM05D006056 ORTHO05D007136 1.1e-21 106.3 69 72.5
HPP92_023265 Vanilla planifolia HOM05D002937 ORTHO05D003063 1.1e-21 106.3 61 82.0
HPP92_023300 Vanilla planifolia HOM05D002937 ORTHO05D003063 1.1e-21 106.3 61 82.0
ECA248G1356 Erigeron canadensis HOM05D006056 ORTHO05D007136 7.5e-21 103.6 54 88.9
Gorai.011G216500 Gossypium raimondii HOM05D006056 ORTHO05D007136 9.7e-21 103.2 67 71.6
Sed0006964 Sechium edule HOM05D006056 ORTHO05D007136 1.2e-18 96.3 66 71.2
Pp3c1_18440 Physcomitrium patens HOM05D006056 ORTHO05D007136 3.2e-16 88.2 68 57.4
AagrBONN_evm.TU.Sc2ySwM_117.3107 Anthoceros agrestis HOM05D006056 ORTHO05D007136 8.8e-14 80.1 69 55.1
Mapoly0006s0285 Marchantia polymorpha HOM05D006056 ORTHO05D007136 2.0e-13 79.0 69 53.6
SMO146G0323 Selaginella moellendorffii HOM05D006056 ORTHO05D007136 5.7e-13 77.4 69 49.3
CBR_g51450 Chara braunii HOM05D006056 ORTHO05D007136 8.3e-12 73.6 66 51.5
Pp3c4_27660 Physcomitrium patens HOM05D006056 ORTHO05D007136 8.3e-12 73.6 65 50.8
MCO07G215 Micromonas commoda HOM05D006056 ORTHO05D007136 5.0e-09 64.3 69 42.0
Medtr3g014240 Medicago truncatula HOM05D006056 ORTHO05D007136 6.1e-07 57.4 34 79.4
Hma1.2p1_0837F.1_g226030 Hydrangea macrophylla HOM05D006056 ORTHO05D007136 1.4e-06 56.2 31 87.1
Actinidia12748 Actinidia chinensis HOM05D006056 ORTHO05D007136 2.3e-06 55.5 30 86.7
EL10Ac3g06702 Beta vulgaris HOM05D006056 ORTHO05D007136 4.0e-06 54.7 27 92.6
AUR62026890 Chenopodium quinoa HOM05D006056 ORTHO05D007136 4.0e-06 54.7 32 78.1
Sc10g0004470 Simmondsia chinensis HOM05D006056 ORTHO05D007136 8.8e-06 53.5 30 83.3


User provided reference genes

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