Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv31977 Davidia involucrata HOM05D005712 ORTHO05D007865 4.2e-198 694.5 353 100.0
CSS0017080 Camellia sinensis var. sinensis HOM05D005712 ORTHO05D007865 1.7e-146 523.1 361 75.1
Actinidia15518 Actinidia chinensis HOM05D005712 ORTHO05D007865 7.3e-142 507.7 358 73.5
Actinidia17068 Actinidia chinensis HOM05D005712 ORTHO05D007865 1.6e-141 506.5 356 73.3
Rhsim06G0004000 Rhododendron simsii HOM05D005712 ORTHO05D007865 2.3e-135 486.1 358 70.7
TAR381G1666 Trochodendron aralioides HOM05D005712 ORTHO05D007865 4.4e-131 471.9 322 74.2
TAR625G0170 Trochodendron aralioides HOM05D005712 ORTHO05D007865 4.9e-130 468.4 336 72.3
Duzib116G0237 Durio zibethinus HOM05D005712 ORTHO05D007865 6.4e-130 468.0 354 68.9
GSVIVG01013413001 Vitis vinifera HOM05D005712 ORTHO05D007865 1.7e-127 459.9 360 67.2
Ciclev10001686m.g Citrus clementina HOM05D005712 ORTHO05D007865 8.6e-127 457.6 355 66.8
vmacro21777 Vaccinium macrocarpon HOM05D005712 ORTHO05D007865 1.1e-126 457.2 348 68.4
Hma1.2p1_0699F.1_g205630 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 1.6e-125 453.4 367 69.8
Nitab4.5_0004637g0020 Nicotiana tabacum HOM05D005712 ORTHO05D007865 1.4e-124 450.3 355 65.6
Thecc.08G064200 Theobroma cacao HOM05D005712 ORTHO05D007865 1.4e-124 450.3 361 65.4
COL.COLO4_07687 Corchorus olitorius HOM05D005712 ORTHO05D007865 5.8e-123 444.9 361 65.7
Cpa.g.sc26.149 Carica papaya HOM05D005712 ORTHO05D007865 3.8e-122 442.2 360 65.3
CiPaw.07G134700 Carya illinoinensis HOM05D005712 ORTHO05D007865 4.9e-122 441.8 355 65.6
Nitab4.5_0000486g0150 Nicotiana tabacum HOM05D005712 ORTHO05D007865 1.4e-121 440.3 355 63.9
QL02p015343 Quercus lobata HOM05D005712 ORTHO05D007865 7.1e-121 438.0 359 65.2
Manes.05G126100 Manihot esculenta HOM05D005712 ORTHO05D007865 6.0e-120 434.9 357 64.7
Gohir.A05G177700 Gossypium hirsutum HOM05D005712 ORTHO05D007865 1.5e-118 430.3 359 64.3
Sopen08g012540 Solanum pennellii HOM05D005712 ORTHO05D007865 2.5e-118 429.5 352 63.9
Nn5g31025 Nelumbo nucifera HOM05D005712 ORTHO05D007865 5.6e-118 428.3 359 65.5
PGSC0003DMG400000968 Solanum tuberosum HOM05D005712 ORTHO05D007865 5.6e-118 428.3 352 64.8
Solyc08g042080.3 Solanum lycopersicum HOM05D005712 ORTHO05D007865 2.8e-117 426.0 352 63.6
Oeu004544.1 Olea europaea HOM05D005712 ORTHO05D007865 3.6e-117 425.6 382 61.3
Lj4C5T14 Lonicera japonica HOM05D005712 ORTHO05D007865 4.8e-117 425.2 300 73.0
Cfa014126 Carpinus fangiana HOM05D005712 ORTHO05D007865 3.1e-116 422.5 358 63.7
CAN.G36.16 Capsicum annuum HOM05D005712 ORTHO05D007865 6.9e-116 421.4 352 63.6
Gohir.D05G181100 Gossypium hirsutum HOM05D005712 ORTHO05D007865 1.2e-115 420.6 363 63.1
MSTRG.22087 Avicennia marina HOM05D005712 ORTHO05D007865 4.5e-115 418.7 354 63.3
Potri.005G255300 Populus trichocarpa HOM05D005712 ORTHO05D007865 4.9e-114 415.2 381 59.8
Gorai.009G186100 Gossypium raimondii HOM05D005712 ORTHO05D007865 6.4e-114 414.8 320 67.2
Sabra05G0197900 Salix brachista HOM05D005712 ORTHO05D007865 1.1e-113 414.1 284 73.9
Sed0012463 Sechium edule HOM05D005712 ORTHO05D007865 5.4e-113 411.8 364 62.4
Migut.N02981 Erythranthe guttata HOM05D005712 ORTHO05D007865 9.3e-113 411.0 346 65.6
Potri.002G006300 Populus trichocarpa HOM05D005712 ORTHO05D007865 2.7e-112 409.5 297 72.4
Atru.chr13.78 Acer truncatum HOM05D005712 ORTHO05D007865 6.0e-112 408.3 264 78.4
Haze_22847 Corylus avellana HOM05D005712 ORTHO05D007865 2.3e-111 406.4 401 57.1
MELO3C017048.2 Cucumis melo HOM05D005712 ORTHO05D007865 3.3e-110 402.5 361 60.7
Lsat_1_v5_gn_2_2221 Lactuca sativa HOM05D005712 ORTHO05D007865 4.3e-110 402.1 324 63.6
CsaV3_4G037540 Cucumis sativus L. HOM05D005712 ORTHO05D007865 1.3e-109 400.6 364 60.4
TWI56G0384 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 1.1e-108 397.5 365 61.9
Cc10_g00320 Coffea canephora HOM05D005712 ORTHO05D007865 1.4e-108 397.1 376 60.1
TWI12G0719 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 2.4e-108 396.4 355 61.7
SalBow6G6969 Salvia bowleyana HOM05D005712 ORTHO05D007865 1.7e-106 390.2 402 57.0
Hund05083 Selenicereus undatus HOM05D005712 ORTHO05D007865 1.7e-106 390.2 331 62.5
ECA238G0561 Erigeron canadensis HOM05D005712 ORTHO05D007865 6.4e-106 388.3 339 61.7
Aqoxy6G01560 Aquilegia oxysepala HOM05D005712 ORTHO05D007865 8.4e-106 387.9 343 59.8
SGA_v2.0_scaffold54G19632 Striga asiatica HOM05D005712 ORTHO05D007865 1.9e-105 386.7 308 65.3
DCAR_022990 Daucus carota HOM05D000190 ORTHO05D007865 3.5e-104 382.5 352 58.0
ClCG11G018940 Citrullus lanatus HOM05D005712 ORTHO05D007865 1.0e-103 380.9 369 56.4
MD06G1005200 Malus domestica HOM05D005712 ORTHO05D007865 1.0e-103 380.9 361 59.8
Ah.00g001120 Amaranthus hybridus HOM05D005712 ORTHO05D007865 1.3e-103 380.6 334 60.8
MBI05_g08201_MAGBIO Magnolia biondii HOM05D005712 ORTHO05D007865 3.9e-103 379.0 309 65.7
Peaxi162Scf00632g00416 Petunia axillaris HOM05D005712 ORTHO05D007865 3.9e-103 379.0 273 72.2
HanXRQChr06g0185301 Helianthus annuus HOM05D005712 ORTHO05D007865 1.3e-101 374.0 348 59.2
Prupe.5G006400 Prunus persica HOM05D005712 ORTHO05D007865 1.1e-100 370.9 289 67.8
RcHm_v2.0_Chr7g0216471 Rosa chinensis HOM05D005712 ORTHO05D007865 2.4e-100 369.8 362 57.2
AUR62024105 Chenopodium quinoa HOM05D005712 ORTHO05D007865 6.9e-100 368.2 271 68.3
Sc02g0009220 Simmondsia chinensis HOM05D005712 ORTHO05D007865 6.9e-100 368.2 273 68.5
EL10Ac1g01884 Beta vulgaris HOM05D005712 ORTHO05D007865 4.5e-99 365.5 367 55.9
CANSAT35G0891 Cannabis sativa HOM05D005712 ORTHO05D007865 4.5e-99 365.5 314 64.0
Carub.0001s2029 Capsella rubella HOM05D005712 ORTHO05D007865 1.9e-97 360.1 351 57.0
Glyma.06G015100 Glycine max HOM05D005712 ORTHO05D007865 2.5e-97 359.8 249 71.5
PSO541G4707 Papaver somniferum HOM05D005712 ORTHO05D007865 2.5e-97 359.8 349 55.9
PSO675G3648 Papaver somniferum HOM05D005712 ORTHO05D007865 2.5e-97 359.8 349 55.6
CARHR021260 Cardamine hirsuta HOM05D005712 ORTHO05D007865 9.3e-97 357.8 352 57.4
Eucgr.F03584 Eucalyptus grandis HOM05D005712 ORTHO05D007865 1.2e-96 357.5 357 56.6
THA.LOC104813742 Tarenaya hassleriana HOM05D005712 ORTHO05D007865 2.7e-96 356.3 338 57.4
Lj1g0001697 Lotus japonicus HOM05D005712 ORTHO05D007865 7.9e-96 354.8 305 63.6
AT1G20830 Arabidopsis thaliana HOM05D005712 ORTHO05D007865 3.9e-95 352.4 312 60.6
BcaB03g12849 Brassica carinata HOM05D005712 ORTHO05D007865 5.1e-95 352.1 312 60.3
Phvul.009G007500 Phaseolus vulgaris HOM05D005712 ORTHO05D007865 5.1e-95 352.1 247 71.7
Thhalv10007995m.g Eutrema salsugineum HOM05D005712 ORTHO05D007865 6.7e-95 351.7 324 57.4
FAN18G0352 Fragaria x ananassa HOM05D005712 ORTHO05D007865 8.7e-95 351.3 338 58.3
VMungo1309G2122 Vigna mungo HOM05D005712 ORTHO05D007865 8.7e-95 351.3 316 60.8
arahy.Tifrunner.gnm1.ann1.CTTM8W Arachis hypogaea HOM05D005712 ORTHO05D007865 1.1e-94 350.9 358 55.9
Aa31LG7G4990 Aethionema arabicum HOM05D005712 ORTHO05D007865 5.7e-94 348.6 307 60.3
FAN13G2028 Fragaria x ananassa HOM05D005712 ORTHO05D007865 5.7e-94 348.6 338 58.0
CDE04G2669 Ceratophyllum demersum HOM05D005712 ORTHO05D007865 1.6e-93 347.1 334 58.1
Sp1g18530 Schrenkiella parvula HOM05D005712 ORTHO05D007865 1.6e-93 347.1 359 54.3
Glyma.04G015100 Glycine max HOM05D005712 ORTHO05D007865 2.1e-93 346.7 249 70.7
FAN08G0897 Fragaria x ananassa HOM05D005712 ORTHO05D007865 4.8e-93 345.5 338 58.0
BcaC05g25986 Brassica carinata HOM05D005712 ORTHO05D007865 1.1e-92 344.4 328 57.3
C05p19380 Brassica napus HOM05D005712 ORTHO05D007865 1.1e-92 344.4 328 57.3
Lalb_Chr23g0265571 Lupinus albus HOM05D005712 ORTHO05D007865 1.1e-92 344.4 246 70.3
BolC5t30641H Brassica oleracea HOM05D005712 ORTHO05D007865 1.5e-91 340.5 329 57.1
BcaB07g32078 Brassica carinata HOM05D005712 ORTHO05D007865 3.4e-91 339.3 326 55.8
AUR62035160 Chenopodium quinoa HOM05D005712 ORTHO05D007865 1.0e-90 337.8 352 54.5
BraA06t24791Z Brassica rapa HOM05D005712 ORTHO05D007865 1.3e-90 337.4 327 55.7
FAN04G3045 Fragaria x ananassa HOM05D005712 ORTHO05D007865 1.3e-90 337.4 353 55.5
A06p16820 Brassica napus HOM05D005712 ORTHO05D007865 8.5e-90 334.7 325 55.4
RcHm_v2.0_Chr4g0410601 Rosa chinensis HOM05D005712 ORTHO05D007865 8.5e-90 334.7 262 66.0
Hma1.2p1_0699F.1_g205640 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 2.5e-89 333.2 191 84.8
Medtr3g116050 Medicago truncatula HOM05D005712 ORTHO05D007865 4.2e-89 332.4 356 52.8
FvH4_5g25940 Fragaria vesca HOM05D005712 ORTHO05D007865 7.2e-89 331.6 285 61.1
Ca_15390_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 1.6e-88 330.5 259 65.3
TPR.G38133 Trifolium pratense HOM05D005712 ORTHO05D007865 1.4e-84 317.4 286 56.6
AL1G33850 Arabidopsis lyrata HOM05D005712 ORTHO05D007865 1.5e-83 313.9 238 67.6
arahy.Tifrunner.gnm1.ann1.16JRKN Arachis hypogaea HOM05D005712 ORTHO05D007865 3.4e-83 312.8 302 56.3
Ca_29628_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 2.9e-82 309.7 210 72.4
ATR0807G100 Amborella trichopoda HOM05D005712 ORTHO05D007865 1.6e-80 303.9 305 57.0
unitig_22.g5745 Utricularia gibba HOM05D005712 ORTHO05D007865 7.9e-80 301.6 235 68.5
Psat5g008680 Pisum sativum HOM05D005712 ORTHO05D007865 1.0e-74 284.6 187 72.7
HPP92_022548 Vanilla planifolia HOM05D005712 ORTHO05D007865 1.4e-68 264.2 263 55.5
SEGI_27803 Sequoiadendron giganteum HOM05D005712 ORTHO05D007865 6.5e-66 255.4 217 57.6
Zm00001eb428100 Zea mays HOM05D005712 ORTHO05D007865 8.5e-66 255.0 229 54.1
Cpa.g.sc26.148 Carica papaya HOM05D005712 ORTHO05D007865 1.1e-65 254.6 150 84.0
Os04g0584900 Oryza sativa ssp. japonica HOM05D005712 ORTHO05D007865 4.7e-64 249.2 265 48.7
Zm00001eb072780 Zea mays HOM05D005712 ORTHO05D007865 1.4e-63 247.7 266 50.0
Oeu019899.1 Olea europaea HOM05D005712 ORTHO05D007865 1.2e-54 218.0 121 84.3
Mapoly0022s0159 Marchantia polymorpha HOM05D005712 ORTHO05D007865 1.5e-54 217.6 291 44.0
SMO276G0054 Selaginella moellendorffii HOM05D005712 ORTHO05D007865 2.8e-53 213.4 197 54.8
AagrBONN_evm.TU.Sc2ySwM_117.1031 Anthoceros agrestis HOM05D005712 ORTHO05D007865 1.6e-51 207.6 173 58.4
Duzib093G1432 Durio zibethinus HOM05D005712 ORTHO05D007865 1.5e-49 201.1 103 90.3
Pp3c9_6030 Physcomitrium patens HOM05D005712 ORTHO05D007865 1.9e-49 200.7 187 55.1
Pp3c15_5620 Physcomitrium patens HOM05D005712 ORTHO05D007865 3.0e-47 193.4 278 41.4
Cpa.g.c30366.3 Carica papaya HOM05D005712 ORTHO05D007865 2.8e-32 143.7 79 82.3
Cpa.g.c44851 Carica papaya HOM05D005712 ORTHO05D007865 3.1e-31 140.2 69 91.3
Oeu019902.1 Olea europaea HOM05D005712 ORTHO05D007865 1.7e-29 134.4 187 46.5
TAR188G0003 Trochodendron aralioides HOM05D005712 ORTHO05D007865 8.6e-18 95.5 86 57.0
A07p15460 Brassica napus HOM05D005712 ORTHO05D007865 5.2e-15 86.3 58 69.0
BolC8t49668H Brassica oleracea HOM05D005712 ORTHO05D032168 1.2e-08 65.1 133 30.8
BcaB03g14422 Brassica carinata HOM05D005712 ORTHO05D014368 2.1e-08 64.3 50 64.0
Cpa.g.c30633.1 Carica papaya HOM05D005712 ORTHO05D120172 9.0e-07 58.9 55 58.2


User provided reference genes

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