Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv31968 Davidia involucrata HOM05D007018 ORTHO05D008887 2.3e-114 415.6 211 100.0
Actinidia17062 Actinidia chinensis HOM05D007018 ORTHO05D008887 5.2e-79 298.1 181 82.3
Hma1.2p1_0699F.1_g205550 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 1.5e-78 296.6 191 76.4
QL02p015150 Quercus lobata HOM05D007018 ORTHO05D008887 2.6e-78 295.8 178 82.0
GSVIVG01013398001 Vitis vinifera HOM05D007018 ORTHO05D008887 8.4e-77 290.8 184 78.8
Nn5g31007 Nelumbo nucifera HOM05D007018 ORTHO05D008887 1.9e-76 289.7 176 80.7
TAR625G1418 Trochodendron aralioides HOM05D007018 ORTHO05D008887 2.4e-76 289.3 187 75.4
CiPaw.08G075600 Carya illinoinensis HOM05D007018 ORTHO05D008887 7.1e-76 287.7 179 80.4
CSS0014140 Camellia sinensis var. sinensis HOM05D007018 ORTHO05D008887 1.2e-75 287.0 186 77.4
TAR633G0270 Trochodendron aralioides HOM05D007018 ORTHO05D008887 7.8e-75 284.3 187 73.8
CAN.G311.135 Capsicum annuum HOM05D007018 ORTHO05D008887 2.3e-74 282.7 181 75.7
Sc26g0004680 Simmondsia chinensis HOM05D007018 ORTHO05D008887 1.5e-73 280.0 203 74.4
Potri.005G253600 Populus trichocarpa HOM05D007018 ORTHO05D008887 5.6e-73 278.1 191 75.4
Sabra05G0196700 Salix brachista HOM05D007018 ORTHO05D008887 7.3e-73 277.7 185 76.8
RcHm_v2.0_Chr7g0215941 Rosa chinensis HOM05D007018 ORTHO05D008887 9.6e-73 277.3 179 77.7
Haze_22833 Corylus avellana HOM05D007018 ORTHO05D008887 1.3e-72 276.9 179 78.2
Prupe.5G008700 Prunus persica HOM05D007018 ORTHO05D008887 2.1e-72 276.2 183 76.0
HanXRQChr08g0216381 Helianthus annuus HOM05D007018 ORTHO05D008887 4.8e-72 275.0 192 71.4
Lsat_1_v5_gn_8_27360 Lactuca sativa HOM05D007018 ORTHO05D008887 4.8e-72 275.0 186 73.1
Lj4A809G49 Lonicera japonica HOM05D007018 ORTHO05D008887 1.1e-71 273.9 172 77.3
MSTRG.993 Avicennia marina HOM05D007018 ORTHO05D008887 2.4e-71 272.7 205 69.3
Migut.C00367 Erythranthe guttata HOM05D007018 ORTHO05D008887 9.0e-71 270.8 189 72.0
DCAR_022937 Daucus carota HOM05D007018 ORTHO05D008887 1.2e-70 270.4 179 74.9
Peaxi162Scf00680g00121 Petunia axillaris HOM05D007018 ORTHO05D008887 1.2e-70 270.4 191 68.1
Sed0005335 Sechium edule HOM05D007018 ORTHO05D008887 1.2e-70 270.4 182 76.4
PGSC0003DMG400009913 Solanum tuberosum HOM05D007018 ORTHO05D008887 2.0e-70 269.6 209 65.6
CsaV3_4G037440 Cucumis sativus L. HOM05D007018 ORTHO05D008887 3.4e-70 268.9 182 76.4
SGA_v2.0_scaffold366G50030 Striga asiatica HOM05D007018 ORTHO05D008887 4.4e-70 268.5 191 70.7
TWI36G0062 Tripterygium wilfordii HOM05D007018 ORTHO05D008887 1.3e-69 266.9 189 72.5
CANSAT25G2394 Cannabis sativa HOM05D007018 ORTHO05D008887 1.7e-69 266.5 188 71.3
MELO3C017041.2 Cucumis melo HOM05D007018 ORTHO05D008887 1.7e-69 266.5 182 75.8
Duzib093G1136 Durio zibethinus HOM05D007018 ORTHO05D008887 2.2e-69 266.2 182 73.1
Sabra02G0005900 Salix brachista HOM05D007018 ORTHO05D008887 3.8e-69 265.4 192 72.4
Cc04_g01910 Coffea canephora HOM05D007018 ORTHO05D008887 4.2e-68 261.9 173 75.1
FAN13G0505 Fragaria x ananassa HOM05D007018 ORTHO05D008887 4.2e-68 261.9 191 70.7
Gohir.D01G088700 Gossypium hirsutum HOM05D007018 ORTHO05D008887 9.3e-68 260.8 177 73.4
Glyma.06G016200 Glycine max HOM05D007018 ORTHO05D008887 1.6e-67 260.0 187 75.4
Aqoxy6G01596 Aquilegia oxysepala HOM05D007018 ORTHO05D008887 2.1e-67 259.6 195 67.7
Eucgr.F01791 Eucalyptus grandis HOM05D007018 ORTHO05D008887 2.1e-67 259.6 175 73.1
Gorai.002G114400 Gossypium raimondii HOM05D007018 ORTHO05D008887 2.1e-67 259.6 177 73.4
Atru.chr13.101 Acer truncatum HOM05D007018 ORTHO05D008887 2.7e-67 259.2 187 70.6
CDE05G1284 Ceratophyllum demersum HOM05D007018 ORTHO05D008887 2.7e-67 259.2 167 74.3
FAN18G2290 Fragaria x ananassa HOM05D007018 ORTHO05D008887 2.7e-67 259.2 184 72.8
FvH4_5g25650 Fragaria vesca HOM05D007018 ORTHO05D008887 6.0e-67 258.1 184 72.3
FAN08G2873 Fragaria x ananassa HOM05D007018 ORTHO05D008887 6.0e-67 258.1 183 71.6
Gohir.A01G103400 Gossypium hirsutum HOM05D007018 ORTHO05D008887 6.0e-67 258.1 177 72.9
FAN04G0342 Fragaria x ananassa HOM05D007018 ORTHO05D008887 7.9e-67 257.7 191 69.6
TPR.G38107 Trifolium pratense HOM05D007018 ORTHO05D008887 7.9e-67 257.7 187 72.2
Solyc04g082590.3 Solanum lycopersicum HOM05D007018 ORTHO05D008887 1.0e-66 257.3 200 65.5
Lalb_Chr11g0061471 Lupinus albus HOM05D007018 ORTHO05D008887 1.7e-66 256.5 180 73.9
Sopen04g036220 Solanum pennellii HOM05D007018 ORTHO05D008887 1.7e-66 256.5 209 64.1
ECA233G6114 Erigeron canadensis HOM05D000716 ORTHO05D002658 2.3e-66 256.1 209 62.2
VMungo1309G2102 Vigna mungo HOM05D007018 ORTHO05D008887 3.9e-66 255.4 187 74.3
Lj1g0008636 Lotus japonicus HOM05D007018 ORTHO05D008887 6.6e-66 254.6 184 73.4
Rhsim06G0005000 Rhododendron simsii HOM05D007018 ORTHO05D008887 8.7e-66 254.2 172 74.4
Ciclev10002616m.g Citrus clementina HOM05D007018 ORTHO05D008887 1.5e-65 253.4 174 72.4
Hma1.2p1_0699F.1_g205540 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 3.3e-65 252.3 148 82.4
PSO541G4149 Papaver somniferum HOM05D007018 ORTHO05D008887 3.3e-65 252.3 183 70.5
Phvul.009G006300 Phaseolus vulgaris HOM05D007018 ORTHO05D008887 3.6e-64 248.8 191 71.2
Psat5g009640 Pisum sativum HOM05D007018 ORTHO05D008887 3.6e-64 248.8 169 73.4
MD06G1006600 Malus domestica HOM05D007018 ORTHO05D008887 6.2e-64 248.1 165 74.5
ClCG11G018850 Citrullus lanatus HOM05D007018 ORTHO05D008887 1.8e-63 246.5 182 72.0
unitig_749.g13890 Utricularia gibba HOM05D007018 ORTHO05D008887 1.5e-62 243.4 193 64.8
Medtr3g115880 Medicago truncatula HOM05D007018 ORTHO05D008887 2.0e-62 243.0 188 69.7
Sp1g32030 Schrenkiella parvula HOM05D007018 ORTHO05D008887 7.6e-62 241.1 168 69.6
vmacro21785 Vaccinium macrocarpon HOM05D007018 ORTHO05D008887 2.9e-61 239.2 250 54.0
Actinidia15510 Actinidia chinensis HOM05D007018 ORTHO05D008887 3.8e-61 238.8 137 86.9
Manes.18G003600 Manihot esculenta HOM05D007018 ORTHO05D008887 6.4e-61 238.0 192 67.7
Thhalv10004993m.g Eutrema salsugineum HOM05D007018 ORTHO05D008887 8.4e-61 237.7 182 63.7
PGR083G2064 Punica granatum HOM05D007018 ORTHO05D008887 8.4e-61 237.7 180 69.4
CARHR292440 Cardamine hirsuta HOM05D007018 ORTHO05D008887 1.1e-60 237.3 186 64.5
A08p07720 Brassica napus HOM05D007018 ORTHO05D008887 3.2e-60 235.7 175 65.7
BraA08t32785Z Brassica rapa HOM05D007018 ORTHO05D008887 3.2e-60 235.7 168 67.3
BcaB04g17781 Brassica carinata HOM05D007018 ORTHO05D008887 4.2e-60 235.3 168 67.9
AL1G51350 Arabidopsis lyrata HOM05D007018 ORTHO05D008887 7.1e-60 234.6 168 67.3
BcaC07g37460 Brassica carinata HOM05D007018 ORTHO05D008887 7.1e-60 234.6 168 66.7
C08p09340 Brassica napus HOM05D007018 ORTHO05D008887 7.1e-60 234.6 175 65.1
BolC8t47779H Brassica oleracea HOM05D007018 ORTHO05D008887 9.3e-60 234.2 168 66.7
THA.LOC104806916 Tarenaya hassleriana HOM05D007018 ORTHO05D008887 2.7e-59 232.6 168 67.9
arahy.Tifrunner.gnm1.ann1.R1PR4F Arachis hypogaea HOM05D007018 ORTHO05D008887 3.5e-59 232.3 194 64.4
AT1G42480 Arabidopsis thaliana HOM05D007018 ORTHO05D008887 4.6e-59 231.9 179 63.7
arahy.Tifrunner.gnm1.ann1.UKS4G3 Arachis hypogaea HOM05D007018 ORTHO05D008887 7.9e-59 231.1 196 64.8
Carub.0001s3428 Capsella rubella HOM05D007018 ORTHO05D008887 1.3e-58 230.3 168 66.1
HPP92_012484 Vanilla planifolia HOM05D007018 ORTHO05D008887 1.3e-58 230.3 187 62.6
SalBow7G2934 Salvia bowleyana HOM05D007018 ORTHO05D008887 2.8e-56 222.6 141 76.6
Aa31sc108G20 Aethionema arabicum HOM05D007018 ORTHO05D008887 6.2e-56 221.5 168 63.7
ATR0807G118 Amborella trichopoda HOM05D007018 ORTHO05D008887 3.1e-55 219.2 155 74.8
Thecc.08G062700 Theobroma cacao HOM05D007018 ORTHO05D008887 3.1e-55 219.2 131 80.9
Manes.13G069000 Manihot esculenta HOM05D007018 ORTHO05D008887 2.2e-53 213.0 138 77.5
Os02g0117200 Oryza sativa ssp. japonica HOM05D007018 ORTHO05D008887 3.8e-53 212.2 183 60.1
COL.COLO4_37754 Corchorus olitorius HOM05D007018 ORTHO05D008887 1.1e-52 210.7 141 72.3
Zm00001eb209390 Zea mays HOM05D007018 ORTHO05D008887 7.9e-51 204.5 165 62.4
AUR62035144 Chenopodium quinoa HOM05D007018 ORTHO05D008887 2.2e-45 186.4 193 54.4
Nitab4.5_0009646g0030 Nicotiana tabacum HOM05D007018 ORTHO05D008887 8.4e-45 184.5 203 50.7
Pp3c3_21490 Physcomitrium patens HOM05D007018 ORTHO05D008887 6.1e-43 178.3 191 50.8
Ca_15400_v3 Cicer arietinum L. HOM05D007018 ORTHO05D008887 1.3e-40 170.6 128 66.4
EL10Ac1g01910 Beta vulgaris HOM05D007018 ORTHO05D008887 1.8e-39 166.8 163 57.7
AUR62042577 Chenopodium quinoa HOM05D007018 ORTHO05D008887 2.4e-39 166.4 173 54.3
HPP92_001689 Vanilla planifolia HOM05D007018 ORTHO05D008887 2.2e-37 159.8 146 54.1
Hma1.2p1_0699F.1_g205580 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 3.3e-33 146.0 88 78.4
Glyma.04G016200 Glycine max HOM05D007018 ORTHO05D008887 4.3e-33 145.6 102 77.5
Prupe.5G008600 Prunus persica HOM05D007018 ORTHO05D008887 1.1e-31 141.0 83 77.1
Cre16.g661700 Chlamydomonas reinhardtii HOM05D007018 ORTHO05D008887 1.2e-27 127.5 173 45.1
AUR62042580 Chenopodium quinoa HOM05D007018 ORTHO05D008887 1.7e-24 117.1 170 43.5
Hund05090 Selenicereus undatus HOM05D007018 ORTHO05D008887 1.4e-23 114.0 127 51.2
Potri.002G007601 Populus trichocarpa HOM05D007018 ORTHO05D008887 4.5e-22 109.0 75 73.3
AagrBONN_evm.TU.Sc2ySwM_228.4250 Anthoceros agrestis HOM05D007018 ORTHO05D008887 1.1e-20 104.4 80 61.2
MCO14G410 Micromonas commoda HOM05D007018 ORTHO05D008887 1.1e-20 104.4 171 35.1
PRCOL_00006317 Prasinoderma coloniale HOM05D007018 ORTHO05D008887 6.7e-18 95.1 139 39.6
SEGI_04341 Sequoiadendron giganteum HOM05D007018 ORTHO05D008887 2.2e-13 80.1 73 50.7
SHI07963 Sapria himalayana HOM05D007018 ORTHO05D008887 2.0e-09 67.0 40 80.0
HPP92_012557 Vanilla planifolia HOM05D007018 ORTHO05D008887 8.3e-08 61.6 71 47.9
SHI07962 Sapria himalayana HOM05D007018 ORTHO05D008887 3.1e-07 59.7 36 75.0


User provided reference genes

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