Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv31891 Davidia involucrata HOM05D007648 ORTHO05D009613 6.7e-38 160.2 83 100.0
Actinidia29767 Actinidia chinensis HOM05D007648 ORTHO05D009613 4.2e-32 141.0 83 88.0
CSS0030217 Camellia sinensis var. sinensis HOM05D007648 ORTHO05D009613 9.4e-32 139.8 81 88.9
Haze_22702 Corylus avellana HOM05D007648 ORTHO05D009613 2.1e-31 138.7 82 85.4
CiPaw.07G143700 Carya illinoinensis HOM05D007648 ORTHO05D009613 1.0e-30 136.3 81 87.7
Manes.05G142600 Manihot esculenta HOM05D007648 ORTHO05D009613 1.0e-30 136.3 81 85.2
Thecc.08G051700 Theobroma cacao HOM05D007648 ORTHO05D009613 1.0e-30 136.3 83 83.1
QL02p012929 Quercus lobata HOM05D007648 ORTHO05D009613 1.4e-30 136.0 81 85.2
GSVIVG01008741001 Vitis vinifera HOM05D007648 ORTHO05D009613 1.4e-30 136.0 81 85.2
TAR625G0376 Trochodendron aralioides HOM05D007648 ORTHO05D009613 3.9e-30 134.4 81 84.0
COL.COLO4_26084 Corchorus olitorius HOM05D007648 ORTHO05D009613 8.8e-30 133.3 83 80.7
Potri.014G181400 Populus trichocarpa HOM05D007648 ORTHO05D009613 1.1e-29 132.9 81 84.0
Sabra14G0141300 Salix brachista HOM05D000525 ORTHO05D001368 7.4e-29 130.2 81 82.7
Duzib093G2040 Durio zibethinus HOM05D007648 ORTHO05D009613 1.7e-28 129.0 81 81.5
Rhsim07G0248300 Rhododendron simsii HOM05D007648 ORTHO05D009613 1.7e-28 129.0 81 79.0
ClCG05G015420 Citrullus lanatus HOM05D007648 ORTHO05D009613 2.2e-28 128.6 81 77.8
Sc02g0008880 Simmondsia chinensis HOM05D007648 ORTHO05D009613 2.8e-28 128.3 81 80.2
TWI12G0541 Tripterygium wilfordii HOM05D007648 ORTHO05D009613 1.1e-27 126.3 81 77.8
Lj5g0008894 Lotus japonicus HOM05D007648 ORTHO05D009613 1.4e-27 125.9 77 83.1
Sc02g0008840 Simmondsia chinensis HOM05D007648 ORTHO05D009613 1.4e-27 125.9 81 79.0
vmacro17151 Vaccinium macrocarpon HOM05D007648 ORTHO05D009613 4.1e-27 124.4 81 77.8
Prupe.1G359500 Prunus persica HOM05D007648 ORTHO05D009613 5.3e-27 124.0 81 76.5
Hund05152 Selenicereus undatus HOM05D000399 ORTHO05D000304 5.3e-27 124.0 80 76.2
CARHR069590 Cardamine hirsuta HOM05D007648 ORTHO05D009613 7.0e-27 123.6 81 75.3
Ciclev10003012m.g Citrus clementina HOM05D007648 ORTHO05D009613 7.0e-27 123.6 81 75.3
Carub.0002s2295 Capsella rubella HOM05D007648 ORTHO05D009613 9.1e-27 123.2 81 74.1
Atru.chr13.217 Acer truncatum HOM05D007648 ORTHO05D009613 1.2e-26 122.9 80 80.0
Glyma.17G261200 Glycine max HOM05D007648 ORTHO05D009613 1.2e-26 122.9 77 80.5
RcHm_v2.0_Chr6g0303661 Rosa chinensis HOM05D007648 ORTHO05D009613 1.2e-26 122.9 81 76.5
Sed0006121 Sechium edule HOM05D007648 ORTHO05D009613 1.2e-26 122.9 81 75.3
THA.LOC104811443 Tarenaya hassleriana HOM05D007648 ORTHO05D009613 1.2e-26 122.9 81 75.3
HanXRQChr06g0185111 Helianthus annuus HOM05D007648 ORTHO05D009613 1.6e-26 122.5 80 75.0
Lsat_1_v5_gn_5_1580 Lactuca sativa HOM05D007648 ORTHO05D009613 1.6e-26 122.5 81 72.8
Phvul.001G002600 Phaseolus vulgaris HOM05D007648 ORTHO05D009613 1.6e-26 122.5 78 79.5
CAN.G22.4 Capsicum annuum HOM05D007648 ORTHO05D009613 2.0e-26 122.1 79 77.2
Rhsim07G0248100 Rhododendron simsii HOM05D007648 ORTHO05D009613 2.0e-26 122.1 79 78.5
AT1G76065 Arabidopsis thaliana HOM05D007648 ORTHO05D009613 2.6e-26 121.7 79 74.7
arahy.Tifrunner.gnm1.ann1.8I3IQY Arachis hypogaea HOM05D007648 ORTHO05D009613 2.6e-26 121.7 79 77.2
Eucgr.F03708 Eucalyptus grandis HOM05D007648 ORTHO05D009613 2.6e-26 121.7 81 76.5
PGSC0003DMG400023820 Solanum tuberosum HOM05D007648 ORTHO05D009613 2.6e-26 121.7 79 75.9
Psat6g001120 Pisum sativum HOM05D007648 ORTHO05D009613 3.5e-26 121.3 77 80.5
Ah.00g000660 Amaranthus hybridus HOM05D007648 ORTHO05D009613 4.5e-26 120.9 80 73.8
Aa31LG4G6180 Aethionema arabicum HOM05D007648 ORTHO05D009613 5.9e-26 120.6 82 73.2
Thhalv10019391m.g Eutrema salsugineum HOM05D007648 ORTHO05D009613 5.9e-26 120.6 81 75.3
FvH4_2g37960 Fragaria vesca HOM05D007648 ORTHO05D009613 5.9e-26 120.6 81 75.3
Sopen06g017690 Solanum pennellii HOM05D007648 ORTHO05D009613 5.9e-26 120.6 79 74.7
AL2G36100 Arabidopsis lyrata HOM05D007648 ORTHO05D009613 7.7e-26 120.2 79 73.4
Ca_13484_v3 Cicer arietinum L. HOM05D007648 ORTHO05D009613 7.7e-26 120.2 77 79.2
Medtr1g026100 Medicago truncatula HOM05D007648 ORTHO05D009613 1.0e-25 119.8 77 79.2
arahy.Tifrunner.gnm1.ann1.EILY3I Arachis hypogaea HOM05D007648 ORTHO05D009613 1.3e-25 119.4 77 77.9
Phvul.001G002300 Phaseolus vulgaris HOM05D007648 ORTHO05D009613 1.3e-25 119.4 77 77.9
Gohir.D01G035600 Gossypium hirsutum HOM05D007648 ORTHO05D009613 1.7e-25 119.0 79 74.7
Lalb_Chr19g0131601 Lupinus albus HOM05D007648 ORTHO05D009613 1.7e-25 119.0 77 76.6
EL10Ac1g02083 Beta vulgaris HOM05D000399 ORTHO05D000304 2.2e-25 118.6 80 75.0
Gorai.002G043700 Gossypium raimondii HOM05D007648 ORTHO05D009613 2.2e-25 118.6 79 74.7
VMungo0647G0751 Vigna mungo HOM05D007648 ORTHO05D009613 2.9e-25 118.2 75 80.0
FAN15G0474 Fragaria x ananassa HOM05D007648 ORTHO05D009613 3.8e-25 117.9 81 74.1
FAN20G1741 Fragaria x ananassa HOM05D007648 ORTHO05D009613 3.8e-25 117.9 81 74.1
Gohir.A01G044700 Gossypium hirsutum HOM05D007648 ORTHO05D009613 3.8e-25 117.9 79 73.4
MD15G1006800 Malus domestica HOM05D007648 ORTHO05D009613 3.8e-25 117.9 81 72.8
MD08G1007600 Malus domestica HOM05D007648 ORTHO05D009613 6.5e-25 117.1 81 72.8
ECA238G3742 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.5e-25 116.7 72 77.8
Cc10_g01140 Coffea canephora HOM05D007648 ORTHO05D009613 1.1e-24 116.3 80 73.8
PSO210G3155 Papaver somniferum HOM05D007648 ORTHO05D009613 1.1e-24 116.3 74 78.4
Aqoxy5G01099 Aquilegia oxysepala HOM05D007648 ORTHO05D009613 1.9e-24 115.5 81 72.8
CAN.G22.7 Capsicum annuum HOM05D007648 ORTHO05D009613 3.2e-24 114.8 78 74.4
BraA08t32933Z Brassica rapa HOM05D007648 ORTHO05D009613 4.2e-24 114.4 81 71.6
A08p09340 Brassica napus HOM05D007648 ORTHO05D009613 5.5e-24 114.0 81 71.6
BolC8t48002H Brassica oleracea HOM05D007648 ORTHO05D009613 5.5e-24 114.0 81 71.6
Os02g0667000 Oryza sativa ssp. japonica HOM05D007648 ORTHO05D009613 9.4e-24 113.2 81 71.6
DCAR_021446 Daucus carota HOM05D007648 ORTHO05D009613 1.2e-23 112.8 81 72.8
BcaB07g30075 Brassica carinata HOM05D007648 ORTHO05D009613 1.6e-23 112.5 81 71.6
BcaC07g37632 Brassica carinata HOM05D007648 ORTHO05D009613 1.6e-23 112.5 81 70.4
HPP92_003481 Vanilla planifolia HOM05D007648 ORTHO05D009613 2.1e-23 112.1 81 70.4
CsaV3_3G046120 Cucumis sativus L. HOM05D007648 ORTHO05D009613 6.1e-23 110.5 81 67.9
HPP92_026879 Vanilla planifolia HOM05D007648 ORTHO05D009613 8.0e-23 110.2 81 70.4
CDE04G2628 Ceratophyllum demersum HOM05D007648 ORTHO05D009613 1.0e-22 109.8 80 73.8
SalBow7G1731 Salvia bowleyana HOM05D007648 ORTHO05D009613 1.4e-22 109.4 80 70.0
MELO3C003728.2 Cucumis melo HOM05D007648 ORTHO05D009613 3.0e-22 108.2 81 66.7
MBI05_g46751_MAGBIO Magnolia biondii HOM05D007648 ORTHO05D009613 6.7e-22 107.1 72 77.8
Migut.C00899 Erythranthe guttata HOM05D007648 ORTHO05D009613 4.4e-21 104.4 77 68.8
BraA02t08664Z Brassica rapa HOM05D007648 ORTHO05D009613 5.7e-21 104.0 74 70.3
Nitab4.5_0004193g0030 Nicotiana tabacum HOM05D000998 ORTHO05D000806 2.8e-20 101.7 66 75.8
BolC2t11627H Brassica oleracea HOM05D007648 ORTHO05D009613 9.1e-19 96.7 81 64.2
Nitab4.5_0000716g0050 Nicotiana tabacum HOM05D000998 ORTHO05D000806 1.6e-18 95.9 61 78.7
Peaxi162Scf00394g00212 Petunia axillaris HOM05D007648 ORTHO05D009613 1.6e-18 95.9 67 71.6
AUR62036713 Chenopodium quinoa HOM05D000399 ORTHO05D000304 1.5e-16 89.4 134 42.5
Mapoly0088s0028 Marchantia polymorpha HOM05D007648 ORTHO05D009613 3.2e-16 88.2 80 55.0
C02p55750 Brassica napus HOM05D007648 ORTHO05D009613 2.1e-15 85.5 70 62.9
Pp3c8_20950 Physcomitrium patens HOM05D007648 ORTHO05D009613 1.4e-14 82.8 77 55.8
A02p36690 Brassica napus HOM05D007648 ORTHO05D009613 3.0e-14 81.6 59 67.8
AagrBONN_evm.TU.Sc2ySwM_344.3278 Anthoceros agrestis HOM05D007648 ORTHO05D009613 2.6e-13 78.6 76 55.3
Os03g0159800 Oryza sativa ssp. japonica HOM05D007648 ORTHO05D009613 9.1e-11 70.1 45 71.1
AUR62013884 Chenopodium quinoa HOM05D007648 ORTHO05D009613 2.7e-10 68.6 44 72.7
SalBow1G6040 Salvia bowleyana HOM05D038733 ORTHO05D009613 1.3e-09 66.2 44 72.7
SalBow7G3523 Salvia bowleyana HOM05D038733 ORTHO05D009613 1.3e-09 66.2 44 72.7
unitig_748.g7721 Utricularia gibba HOM05D007648 ORTHO05D009613 3.8e-09 64.7 57 57.9
Actinidia37950 Actinidia chinensis HOM05D007648 ORTHO05D009613 5.0e-09 64.3 38 78.9
MCO07G444 Micromonas commoda HOM05D007648 ORTHO05D009613 2.1e-07 58.9 72 45.8
BcaC03g17585 Brassica carinata HOM05D007648 ORTHO05D009613 3.0e-06 55.1 80 46.2
Cre14.g626667 Chlamydomonas reinhardtii HOM05D007648 ORTHO05D009613 5.2e-06 54.3 80 41.2
PRCOL_00002456 Prasinoderma coloniale HOM05D007648 ORTHO05D009613 8.8e-06 53.5 79 40.5


User provided reference genes

Program Settings