Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv31883 Davidia involucrata HOM05D006215 ORTHO05D007719 1.5e-127 459.5 230 100.0
CSS0039588 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 3.5e-84 315.5 239 70.3
Prupe.4G165400 Prunus persica HOM05D006215 ORTHO05D007719 4.5e-84 315.1 210 73.8
GSVIVG01009974001 Vitis vinifera HOM05D006215 ORTHO05D009429 7.7e-84 314.3 187 82.9
CSS0005676 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 1.0e-83 313.9 239 69.9
Ciclev10002478m.g Citrus clementina HOM05D006215 ORTHO05D007719 1.7e-83 313.2 230 68.7
Cfa013993 Carpinus fangiana HOM05D006215 ORTHO05D007719 6.5e-83 311.2 216 71.8
MD03G1242500 Malus domestica HOM05D006215 ORTHO05D007719 2.5e-82 309.3 199 75.4
Solyc04g081850.4 Solanum lycopersicum HOM05D006215 ORTHO05D007719 3.2e-82 308.9 231 68.0
QL02p012562 Quercus lobata HOM05D006215 ORTHO05D007719 5.5e-82 308.1 227 70.5
PGSC0003DMG400009949 Solanum tuberosum HOM05D006215 ORTHO05D007719 1.2e-81 307.0 231 67.5
Sopen04g035480 Solanum pennellii HOM05D006215 ORTHO05D007719 1.6e-81 306.6 231 67.1
Manes.18G010300 Manihot esculenta HOM05D006215 ORTHO05D007719 2.7e-81 305.8 219 70.8
Rhsim06G0017400 Rhododendron simsii HOM05D006215 ORTHO05D007719 8.0e-81 304.3 231 68.0
DCAR_009503 Daucus carota HOM05D006215 ORTHO05D007719 1.4e-80 303.5 192 77.6
RcHm_v2.0_Chr5g0031011 Rosa chinensis HOM05D006215 ORTHO05D007719 1.4e-80 303.5 198 74.2
MSTRG.1158 Avicennia marina HOM05D006215 ORTHO05D007719 1.8e-80 303.1 238 65.1
Cpa.g.sc26.282 Carica papaya HOM05D006215 ORTHO05D007719 1.8e-80 303.1 211 72.0
FAN11G1504 Fragaria x ananassa HOM05D006215 ORTHO05D007719 2.3e-80 302.8 198 73.7
Potri.002G018100 Populus trichocarpa HOM05D006215 ORTHO05D007719 2.3e-80 302.8 218 71.1
Thecc.08G049400 Theobroma cacao HOM05D006215 ORTHO05D007719 3.0e-80 302.4 230 67.8
Gohir.D01G096200 Gossypium hirsutum HOM05D006215 ORTHO05D007719 1.5e-79 300.1 235 67.2
FAN25G2739 Fragaria x ananassa HOM05D006215 ORTHO05D007719 4.4e-79 298.5 198 72.7
Sabra02G0014400 Salix brachista HOM05D006215 ORTHO05D007719 4.4e-79 298.5 239 66.1
Gorai.002G121700 Gossypium raimondii HOM05D006215 ORTHO05D007719 1.3e-78 297.0 235 66.4
Lj4C18G8 Lonicera japonica HOM05D000114 ORTHO05D009837 1.7e-78 296.6 235 65.1
Gohir.A01G109400 Gossypium hirsutum HOM05D006215 ORTHO05D007719 2.8e-78 295.8 235 66.8
vmacro21863 Vaccinium macrocarpon HOM05D006215 ORTHO05D007719 4.8e-78 295.0 235 66.0
Atru.chr13.240 Acer truncatum HOM05D006215 ORTHO05D007719 6.3e-78 294.7 208 70.7
Duzib041G0142 Durio zibethinus HOM05D006215 ORTHO05D007719 8.2e-78 294.3 230 66.1
Phvul.009G018900 Phaseolus vulgaris HOM05D006215 ORTHO05D007719 4.1e-77 292.0 212 68.9
COL.COLO4_26102 Corchorus olitorius HOM05D006215 ORTHO05D007719 5.3e-77 291.6 228 66.7
Nn5g30812 Nelumbo nucifera HOM05D006215 ORTHO05D007719 5.3e-77 291.6 184 76.1
Glyma.04G021700 Glycine max HOM05D006215 ORTHO05D007719 9.1e-77 290.8 210 69.0
arahy.Tifrunner.gnm1.ann1.89BLSN Arachis hypogaea HOM05D006215 ORTHO05D007719 1.2e-76 290.4 186 75.8
Lj1g0006385 Lotus japonicus HOM05D006215 ORTHO05D007719 7.7e-76 287.7 217 65.4
VMungo1215G3215 Vigna mungo HOM05D006215 ORTHO05D007719 1.0e-75 287.3 207 69.6
CAN.G311.58 Capsicum annuum HOM05D006215 ORTHO05D007719 5.0e-75 285.0 227 64.3
Lsat_1_v5_gn_8_29640 Lactuca sativa HOM05D006215 ORTHO05D007719 6.5e-75 284.6 187 73.3
SGA_v2.0_scaffold292G47375 Striga asiatica HOM05D006215 ORTHO05D007719 6.5e-75 284.6 184 75.5
CANSAT80G2378 Cannabis sativa HOM05D006215 ORTHO05D007719 8.5e-75 284.3 212 66.5
Glyma.06G021900 Glycine max HOM05D006215 ORTHO05D007719 1.1e-74 283.9 210 69.5
TWI12G0400 Tripterygium wilfordii HOM05D006215 ORTHO05D007719 1.5e-74 283.5 187 73.3
SalBow7G2905 Salvia bowleyana HOM05D006215 ORTHO05D007719 1.9e-74 283.1 236 61.4
Migut.C00887 Erythranthe guttata HOM05D006215 ORTHO05D007719 7.2e-74 281.2 236 61.9
HanXRQChr13g0386921 Helianthus annuus HOM05D006215 ORTHO05D007719 9.4e-74 280.8 214 65.0
Sed0008956 Sechium edule HOM05D006215 ORTHO05D007719 1.2e-73 280.4 223 64.1
CANSAT25G1322 Cannabis sativa HOM05D006215 ORTHO05D007719 1.4e-72 276.9 218 65.6
Medtr3g114470 Medicago truncatula HOM05D006215 ORTHO05D007719 1.4e-72 276.9 193 67.9
Lalb_Chr23g0266051 Lupinus albus HOM05D006215 ORTHO05D007719 1.8e-72 276.6 190 69.5
Ca_15473_v3 Cicer arietinum L. HOM05D006215 ORTHO05D007719 8.8e-72 274.2 212 65.1
CsaV3_3G046060 Cucumis sativus L. HOM05D006215 ORTHO05D007719 2.0e-71 273.1 229 63.3
Psat5g012560 Pisum sativum HOM05D006215 ORTHO05D007719 7.5e-71 271.2 216 62.0
EL10Ac1g02129 Beta vulgaris HOM05D006215 ORTHO05D007719 1.3e-70 270.4 192 68.8
A07p41490 Brassica napus HOM05D006215 ORTHO05D007719 2.2e-70 269.6 224 61.2
BraA07t31681Z Brassica rapa HOM05D006215 ORTHO05D007719 2.2e-70 269.6 224 61.2
BcaB02g07052 Brassica carinata HOM05D006215 ORTHO05D007719 3.7e-70 268.9 227 61.2
HPP92_025438 Vanilla planifolia HOM05D006215 ORTHO05D007719 4.8e-70 268.5 187 69.5
ECA233G5922 Erigeron canadensis HOM05D000114 ORTHO05D000075 1.4e-69 266.9 187 68.4
Oeu033622.1 Olea europaea HOM05D006215 ORTHO05D007719 7.0e-69 264.6 226 61.9
BcaC08g45544 Brassica carinata HOM05D006215 ORTHO05D007719 1.2e-68 263.8 210 64.8
unitig_32.g11202 Utricularia gibba HOM05D006215 ORTHO05D007719 1.2e-68 263.8 191 67.5
A07p28630 Brassica napus HOM05D006215 ORTHO05D007719 1.6e-68 263.5 207 64.7
C06p32240 Brassica napus HOM05D006215 ORTHO05D007719 1.6e-68 263.5 219 63.5
BolC6t38347H Brassica oleracea HOM05D006215 ORTHO05D007719 1.6e-68 263.5 219 63.5
BraA07t30504Z Brassica rapa HOM05D006215 ORTHO05D007719 1.6e-68 263.5 207 64.7
Rhsim06G0015300 Rhododendron simsii HOM05D006215 ORTHO05D007719 1.6e-68 263.5 231 61.9
Aqoxy5G01831 Aquilegia oxysepala HOM05D006215 ORTHO05D007719 2.0e-68 263.1 187 67.4
THA.LOC104811433 Tarenaya hassleriana HOM05D006215 ORTHO05D007719 3.5e-68 262.3 212 64.2
Thhalv10019087m.g Eutrema salsugineum HOM05D006215 ORTHO05D007719 4.5e-68 261.9 186 68.8
Hund01696 Selenicereus undatus HOM05D006215 ORTHO05D007719 1.0e-67 260.8 193 65.8
C06p49900 Brassica napus HOM05D006215 ORTHO05D007719 1.3e-67 260.4 229 60.3
Nitab4.5_0004361g0040 Nicotiana tabacum HOM05D006215 ORTHO05D007719 2.3e-67 259.6 193 70.5
AT1G75980 Arabidopsis thaliana HOM05D006215 ORTHO05D007719 2.9e-67 259.2 185 68.1
MELO3C003734.2 Cucumis melo HOM05D006215 ORTHO05D007719 3.8e-67 258.8 172 75.0
BcaB05g24966 Brassica carinata HOM05D006215 ORTHO05D007719 1.9e-66 256.5 226 59.3
Carub.0002s2287 Capsella rubella HOM05D006215 ORTHO05D007719 2.5e-66 256.1 185 68.1
Sp5g31100 Schrenkiella parvula HOM05D006215 ORTHO05D007719 2.5e-66 256.1 185 68.1
BcaC08g47309 Brassica carinata HOM05D006215 ORTHO05D007719 3.3e-66 255.8 233 58.8
Zm00001eb209250 Zea mays HOM05D006215 ORTHO05D007719 1.2e-65 253.8 190 61.6
PSO339G6481 Papaver somniferum HOM05D006215 ORTHO05D007719 1.0e-64 250.8 231 60.6
CiPaw.07G144900 Carya illinoinensis HOM05D006215 ORTHO05D007719 3.0e-64 249.2 197 66.0
PSO384G0480 Papaver somniferum HOM05D006215 ORTHO05D007719 5.2e-64 248.4 231 60.2
AL2G36000 Arabidopsis lyrata HOM05D006215 ORTHO05D007719 8.9e-64 247.7 224 58.0
CARHR069510 Cardamine hirsuta HOM05D006215 ORTHO05D007719 2.6e-63 246.1 226 58.0
AUR62013912 Chenopodium quinoa HOM05D006215 ORTHO05D007719 2.6e-63 246.1 181 66.3
FvH4_3g18360 Fragaria vesca HOM05D006215 ORTHO05D007719 1.3e-62 243.8 167 70.1
Actinidia15453 Actinidia chinensis HOM05D006215 ORTHO05D007719 3.7e-62 242.3 188 65.4
CDE04G3084 Ceratophyllum demersum HOM05D006215 ORTHO05D007719 4.1e-61 238.8 170 67.6
ClCG05G015490 Citrullus lanatus HOM05D006215 ORTHO05D007719 7.8e-60 234.6 230 57.4
Peaxi162Scf00860g00212 Petunia axillaris HOM05D006215 ORTHO05D007719 1.9e-58 229.9 227 56.8
Eucgr.F03725 Eucalyptus grandis HOM05D006215 ORTHO05D007719 3.3e-58 229.2 160 72.5
PGR083G2507 Punica granatum HOM05D006215 ORTHO05D007719 3.1e-56 222.6 220 56.4
TPR.G38171 Trifolium pratense HOM05D006215 ORTHO05D007719 1.5e-55 220.3 181 63.5
Os02g0120400 Oryza sativa ssp. japonica HOM05D006215 ORTHO05D007719 3.4e-55 219.2 153 66.0
TAR625G0502 Trochodendron aralioides HOM05D006215 ORTHO05D007719 3.2e-53 212.6 157 68.2
arahy.Tifrunner.gnm1.ann1.SEC0EX Arachis hypogaea HOM05D006215 ORTHO05D007719 1.7e-51 206.8 225 51.6
AUR62018279 Chenopodium quinoa HOM05D006215 ORTHO05D007719 1.1e-48 197.6 179 55.9
Actinidia17011 Actinidia chinensis HOM05D006215 ORTHO05D007719 1.5e-47 193.7 172 60.5
ATR1088G027 Amborella trichopoda HOM05D006215 ORTHO05D007719 2.0e-47 193.4 167 62.3
Duzib093G1443 Durio zibethinus HOM05D006215 ORTHO05D007719 1.3e-46 190.7 140 69.3
FAN21G0515 Fragaria x ananassa HOM05D006215 ORTHO05D007719 1.6e-44 183.7 198 49.5
Pp3c20_3890 Physcomitrium patens HOM05D006215 ORTHO05D007719 7.8e-44 181.4 174 50.0
Mapoly0001s0313 Marchantia polymorpha HOM05D006215 ORTHO05D007719 6.6e-43 178.3 177 49.7
Aa31LG4G6130 Aethionema arabicum HOM05D006215 ORTHO05D007719 1.2e-41 174.1 184 49.5
SMO367G0408 Selaginella moellendorffii HOM05D006215 ORTHO05D007719 1.4e-40 170.6 190 45.3
Sc15g0004750 Simmondsia chinensis HOM05D006215 ORTHO05D007719 6.8e-40 168.3 175 53.7
Cc10_g01280 Coffea canephora HOM05D006215 ORTHO05D007719 1.5e-39 167.2 141 58.9
BolC6t40028H Brassica oleracea HOM05D006215 ORTHO05D007719 1.2e-36 157.5 135 59.3
Eucgr.F03727 Eucalyptus grandis HOM05D006215 ORTHO05D007719 3.5e-36 156.0 86 83.7
Haze_22683 Corylus avellana HOM05D006215 ORTHO05D007719 7.8e-36 154.8 115 70.4
SHI08014 Sapria himalayana HOM05D006215 ORTHO05D007719 7.3e-34 148.3 94 70.2
CANSAT25G3730 Cannabis sativa HOM05D006215 ORTHO05D007719 1.1e-32 144.4 108 63.9
Cc10_g01290 Coffea canephora HOM05D006215 ORTHO05D007719 1.2e-31 141.0 85 76.5
Ah.06g187190 Amaranthus hybridus HOM05D006215 ORTHO05D007719 7.1e-29 131.7 146 52.1
SEGI_18034 Sequoiadendron giganteum HOM05D006215 ORTHO05D007719 1.3e-25 120.9 86 65.1
Glyma.02G160800 Glycine max HOM05D006215 ORTHO05D007719 9.0e-24 114.8 62 80.6
AagrBONN_evm.TU.Sc2ySwM_117.1002 Anthoceros agrestis HOM05D006215 ORTHO05D007719 2.2e-22 110.2 125 45.6
CBR_g54848 Chara braunii HOM05D006215 ORTHO05D007719 1.4e-21 107.5 134 44.8
Carub.0005s0222 Capsella rubella HOM05D006215 ORTHO05D007719 1.3e-19 100.9 82 68.3
BcaC03g15638 Brassica carinata HOM05D006215 ORTHO05D007719 1.5e-18 97.4 60 81.7
Medtr6g083100 Medicago truncatula HOM05D006215 ORTHO05D007719 2.5e-18 96.7 132 43.9
Lsat_1_v5_gn_4_111221 Lactuca sativa HOM05D006215 ORTHO05D007719 3.8e-14 82.8 66 63.6
C02p33520 Brassica napus HOM05D006215 ORTHO05D007719 2.4e-13 80.1 42 90.5
BolC2t09353H Brassica oleracea HOM05D006215 ORTHO05D007719 1.6e-12 77.4 42 88.1
MCO13G478 Micromonas commoda HOM05D006215 ORTHO05D007719 1.9e-10 70.5 249 24.1
A02p20380 Brassica napus HOM05D006215 ORTHO05D007719 2.1e-09 67.0 41 80.5
TPR.G38152 Trifolium pratense HOM05D006215 ORTHO05D007719 4.8e-09 65.9 43 65.1
MD11G1262900 Malus domestica HOM05D006215 ORTHO05D007719 1.2e-07 61.2 48 66.7


User provided reference genes

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