Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv31841 Davidia involucrata HOM05D007378 ORTHO05D007577 0.0e+00 1432.2 725 100.0
Dinv39514 Davidia involucrata HOM05D007378 ORTHO05D007577 8.5e-262 907.1 693 73.3
CSS0021578 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 6.2e-212 741.5 794 55.9
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla HOM05D007378 ORTHO05D007577 6.0e-191 671.8 712 56.2
Cfa013945 Carpinus fangiana HOM05D007378 ORTHO05D007577 1.3e-164 584.3 756 50.5
Haze_22630 Corylus avellana HOM05D007378 ORTHO05D007577 1.5e-162 577.4 765 49.9
Actinidia15419 Actinidia chinensis HOM05D007378 ORTHO05D007577 7.6e-162 575.1 764 49.3
QL02p011519 Quercus lobata HOM05D007378 ORTHO05D007577 4.6e-159 565.8 782 48.2
Actinidia16984 Actinidia chinensis HOM05D007378 ORTHO05D007577 8.5e-153 545.0 687 50.9
Prupe.1G365800 Prunus persica HOM05D007378 ORTHO05D007577 5.3e-147 525.8 774 45.1
Rhsim07G0247100 Rhododendron simsii HOM05D007378 ORTHO05D007577 7.9e-143 511.9 678 47.6
GSVIVG01009901001 Vitis vinifera HOM05D007378 ORTHO05D007577 7.9e-143 511.9 665 51.3
Thecc.08G043900 Theobroma cacao HOM05D007378 ORTHO05D007577 4.7e-135 486.1 803 43.0
CiPaw.07G150400 Carya illinoinensis HOM05D007378 ORTHO05D007577 1.1e-133 481.5 673 47.7
Duzib093G0923 Durio zibethinus HOM05D007378 ORTHO05D007577 1.9e-128 464.2 814 41.4
MD08G1013300 Malus domestica HOM05D007378 ORTHO05D007577 2.5e-128 463.8 775 43.4
MD15G1012700 Malus domestica HOM05D007378 ORTHO05D007577 2.1e-127 460.7 776 43.7
TAR381G0696 Trochodendron aralioides HOM05D007378 ORTHO05D007577 1.1e-123 448.4 672 43.8
COL.COLO4_26152 Corchorus olitorius HOM05D007378 ORTHO05D007577 2.3e-118 430.6 812 40.9
Duzib116G0067 Durio zibethinus HOM05D007378 ORTHO05D007577 3.4e-117 426.8 712 42.7
TWI12G0183 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 3.4e-117 426.8 799 41.2
CiPaw.08G066200 Carya illinoinensis HOM05D007378 ORTHO05D007577 1.1e-115 421.8 750 41.5
Ciclev10000382m.g Citrus clementina HOM05D007378 ORTHO05D007577 3.5e-114 416.8 783 40.4
vmacro21724 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 5.0e-113 412.9 589 48.7
Potri.005G238800 Populus trichocarpa HOM05D007378 ORTHO05D007577 6.8e-110 402.5 791 39.9
TWI56G0017 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 8.3e-108 395.6 691 42.5
TWI36G1616 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 5.9e-106 389.4 803 40.0
FvH4_2g38520 Fragaria vesca HOM05D007378 ORTHO05D007577 7.8e-106 389.0 761 38.9
Manes.18G013740 Manihot esculenta HOM05D007378 ORTHO05D007577 7.3e-104 382.5 743 41.0
Manes.05G147800 Manihot esculenta HOM05D007378 ORTHO05D007577 3.6e-103 380.2 677 42.2
CSS0010969 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 3.1e-102 377.1 428 52.8
Cpa.g.sc26.38 Carica papaya HOM05D007378 ORTHO05D007577 4.0e-102 376.7 722 39.1
RcHm_v2.0_Chr6g0302801 Rosa chinensis HOM05D007378 ORTHO05D007577 1.5e-101 374.8 771 39.2
Potri.002G022800 Populus trichocarpa HOM05D007378 ORTHO05D007577 4.4e-101 373.2 795 39.6
FAN15G3724 Fragaria x ananassa HOM05D007378 ORTHO05D007577 4.1e-99 366.7 804 36.3
FAN20G0665 Fragaria x ananassa HOM05D007378 ORTHO05D007577 3.0e-97 360.5 711 38.1
FAN27G0575 Fragaria x ananassa HOM05D007378 ORTHO05D007577 1.1e-96 358.6 772 36.9
Cc10_g01700 Coffea canephora HOM05D007378 ORTHO05D007577 1.2e-95 355.1 697 39.7
Atru.chr13.296 Acer truncatum HOM05D007378 ORTHO05D007577 3.6e-95 353.6 562 45.9
DCAR_013867 Daucus carota HOM05D007378 ORTHO05D007577 2.9e-92 344.0 730 36.0
MSTRG.25246 Avicennia marina HOM05D007378 ORTHO05D007577 1.2e-90 338.6 694 38.9
Sabra02G0018600 Salix brachista HOM05D007378 ORTHO05D007577 1.2e-90 338.6 752 38.6
Sabra05G0184500 Salix brachista HOM05D007378 ORTHO05D007577 6.0e-90 336.3 816 37.5
Nn5g30152 Nelumbo nucifera HOM05D007378 ORTHO05D007577 1.7e-89 334.7 742 39.8
MBI05_g30742_MAGBIO Magnolia biondii HOM05D007378 ORTHO05D007577 3.9e-89 333.6 780 38.2
CSS0024961 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 5.1e-89 333.2 316 62.0
Oeu020868.1 Olea europaea HOM05D007378 ORTHO05D007577 6.6e-89 332.8 624 39.9
CAN.G311.27 Capsicum annuum HOM05D007378 ORTHO05D007577 1.6e-87 328.2 689 36.3
Nitab4.5_0002561g0040 Nicotiana tabacum HOM05D007378 ORTHO05D007577 4.7e-87 326.6 689 36.9
CSS0029124 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 2.0e-85 321.2 319 59.2
PGSC0003DMG400009935 Solanum tuberosum HOM05D007378 ORTHO05D007577 1.2e-82 312.0 691 35.7
Sopen04g035030 Solanum pennellii HOM05D007378 ORTHO05D007577 1.7e-81 308.1 694 35.7
Eucgr.F00598 Eucalyptus grandis HOM05D007378 ORTHO05D007577 3.0e-81 307.4 777 35.6
Solyc04g081420.4 Solanum lycopersicum HOM05D007378 ORTHO05D007577 3.0e-81 307.4 692 35.3
Peaxi162Scf00438g00718 Petunia axillaris HOM05D007378 ORTHO05D007577 1.5e-80 305.1 697 35.2
CANSAT25G3202 Cannabis sativa HOM05D007378 ORTHO05D007577 1.5e-77 295.0 742 36.8
Glyma.17G258000 Glycine max HOM05D007378 ORTHO05D007577 2.9e-76 290.8 705 36.2
Glyma.04G024500 Glycine max HOM05D007378 ORTHO05D007577 1.5e-72 278.5 738 34.4
VMungo0647G1459 Vigna mungo HOM05D007378 ORTHO05D007577 4.3e-72 276.9 705 35.7
Hund05208 Selenicereus undatus HOM05D007378 ORTHO05D007577 7.3e-72 276.2 762 33.9
Glyma.14G219000 Glycine max HOM05D007378 ORTHO05D007577 4.8e-71 273.5 703 35.4
PGR031G0679 Punica granatum HOM05D007378 ORTHO05D007577 3.1e-70 270.8 722 34.5
Phvul.001G006800 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 3.4e-69 267.3 717 34.7
Sc15g0005020 Simmondsia chinensis HOM05D007378 ORTHO05D007577 1.7e-68 265.0 728 33.2
Glyma.06G024600 Glycine max HOM05D007378 ORTHO05D007577 8.4e-68 262.7 785 32.9
Lj1g0027004 Lotus japonicus HOM05D007378 ORTHO05D007577 1.1e-67 262.3 759 34.0
Aqoxy5G01785 Aquilegia oxysepala HOM05D007378 ORTHO05D007577 3.2e-67 260.8 725 33.0
Ca_15483_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 6.0e-66 256.5 736 33.6
Lalb_Chr11g0061931 Lupinus albus HOM05D007378 ORTHO05D007577 4.8e-63 246.9 741 31.6
vmacro04350 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 6.2e-63 246.5 288 51.4
arahy.Tifrunner.gnm1.ann1.WP2VUZ Arachis hypogaea HOM05D007378 ORTHO05D007577 5.8e-61 240.0 727 32.2
Phvul.009G016700 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 3.8e-60 237.3 667 33.6
Duzib041G0283 Durio zibethinus HOM05D007378 ORTHO05D007577 4.2e-59 233.8 385 40.0
arahy.Tifrunner.gnm1.ann1.KUKA7T Arachis hypogaea HOM05D007378 ORTHO05D007577 1.2e-58 232.3 722 32.3
SalBow7G4715 Salvia bowleyana HOM05D007378 ORTHO05D007577 1.2e-58 232.3 674 33.7
PSO700G0360 Papaver somniferum HOM05D007378 ORTHO05D007577 2.7e-58 231.1 715 31.9
Ca_13427_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 3.0e-57 227.6 698 32.8
PSO170G0005 Papaver somniferum HOM05D007378 ORTHO05D007577 3.0e-57 227.6 683 32.8
Migut.C00828 Erythranthe guttata HOM05D007378 ORTHO05D007577 3.3e-56 224.2 680 33.1
VMungo1309G2950 Vigna mungo HOM05D007378 ORTHO05D007577 9.6e-56 222.6 717 32.9
Medtr3g113840 Medicago truncatula HOM05D007378 ORTHO05D007577 2.1e-55 221.5 758 31.5
AUR62033831 Chenopodium quinoa HOM05D007378 ORTHO05D007577 5.3e-54 216.9 671 33.2
Psat5g013200 Pisum sativum HOM05D007378 ORTHO05D007577 1.2e-53 215.7 751 31.4
Lj5g0002996 Lotus japonicus HOM05D007378 ORTHO05D007577 5.8e-53 213.4 738 32.1
TPR.G26373 Trifolium pratense HOM05D007378 ORTHO05D007577 1.7e-52 211.8 701 31.4
Duzib041G0240 Durio zibethinus HOM05D007378 ORTHO05D007577 8.7e-49 199.5 309 46.9
Medtr1g025180 Medicago truncatula HOM05D007378 ORTHO05D007577 2.5e-48 198.0 640 32.0
TPR.G34540 Trifolium pratense HOM05D007378 ORTHO05D007577 7.4e-48 196.4 749 30.6
Lj4A25T50 Lonicera japonica HOM05D007378 ORTHO05D007577 3.1e-46 191.0 271 46.1
Lalb_Chr08g0246161 Lupinus albus HOM05D007378 ORTHO05D007577 2.9e-44 184.5 650 29.2
Psat6g003040 Pisum sativum HOM05D007378 ORTHO05D007577 3.9e-41 174.1 590 30.5
TAR625G0788 Trochodendron aralioides HOM05D000628 ORTHO05D001121 6.7e-41 173.3 209 48.8
AUR62035752 Chenopodium quinoa HOM05D007378 ORTHO05D007577 1.6e-39 168.7 623 28.7
SGA_v2.0_scaffold92G28233 Striga asiatica HOM05D007378 ORTHO05D007577 1.3e-36 159.1 679 28.1
CSS0034917 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.7e-28 132.1 112 58.9
Thhalv10018322m.g Eutrema salsugineum HOM05D010473 ORTHO05D007577 4.7e-26 124.0 747 26.9
THA.LOC104814031 Tarenaya hassleriana HOM05D010473 ORTHO05D007577 6.1e-26 123.6 666 29.1
Aa31LG4G5960 Aethionema arabicum HOM05D010473 ORTHO05D007577 2.0e-24 118.6 756 26.6
AT1G75730 Arabidopsis thaliana HOM05D010473 ORTHO05D007577 2.2e-23 115.2 741 26.0
Sp5g30850 Schrenkiella parvula HOM05D010473 ORTHO05D007577 2.2e-23 115.2 760 26.8
AL2G35720 Arabidopsis lyrata HOM05D010473 ORTHO05D007577 1.8e-22 112.1 760 25.9
Carub.0002s2258 Capsella rubella HOM05D010473 ORTHO05D007577 4.5e-21 107.5 700 26.0
BcaB05g24937 Brassica carinata HOM05D010473 ORTHO05D007577 2.5e-19 101.7 689 26.6
CARHR069140 Cardamine hirsuta HOM05D010473 ORTHO05D007577 9.4e-19 99.8 646 25.4
SGA_v2.0_scaffold11G05915 Striga asiatica HOM05D007378 ORTHO05D007577 5.7e-16 90.5 379 29.0
Atru.chr13.297 Acer truncatum HOM05D007378 ORTHO05D007577 1.4e-14 85.9 100 52.0
Lsat_1_v5_gn_2_9361 Lactuca sativa HOM05D037282 ORTHO05D035104 2.0e-13 82.0 128 40.6
TAR381G0505 Trochodendron aralioides HOM05D007378 ORTHO05D007577 7.7e-13 80.1 105 58.1
ATR0152G004 Amborella trichopoda HOM05D007378 ORTHO05D007577 5.0e-12 77.4 478 27.8
ECA238G3204 Erigeron canadensis HOM05D037282 ORTHO05D035104 8.5e-12 76.6 134 35.1
BraA07t31661Z Brassica rapa HOM05D010473 ORTHO05D007577 9.4e-11 73.2 755 24.0
BcaC03g15618 Brassica carinata HOM05D010473 ORTHO05D007577 6.1e-10 70.5 177 37.9
C06p49680 Brassica napus HOM05D010473 ORTHO05D007577 6.1e-10 70.5 646 25.7
C02p33740 Brassica napus HOM05D010473 ORTHO05D007577 3.0e-09 68.2 272 30.9
BolC2t09331H Brassica oleracea HOM05D010473 ORTHO05D007577 8.8e-09 66.6 162 36.4
BraA02t07054Z Brassica rapa HOM05D010473 ORTHO05D007577 1.2e-08 66.2 108 44.4
BcaC08g47058 Brassica carinata HOM05D010473 ORTHO05D007577 2.6e-08 65.1 206 33.0
A07p41260 Brassica napus HOM05D010473 ORTHO05D007577 7.5e-08 63.5 608 24.2
A02p20200 Brassica napus HOM05D010473 ORTHO05D007577 1.7e-07 62.4 190 32.6
TPR.G31883 Trifolium pratense HOM05D007378 ORTHO05D007577 2.8e-07 61.6 88 40.9
BolC6t40007H Brassica oleracea HOM05D010473 ORTHO05D007577 1.8e-06 58.9 452 27.7


User provided reference genes

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