Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv31819 Davidia involucrata HOM05D007073 ORTHO05D008855 9.1e-57 223.4 117 100.0
Hma1.2p1_0773F.1_g216240 Hydrangea macrophylla HOM05D007073 ORTHO05D008855 1.4e-49 199.5 115 91.3
CSS0049768 Camellia sinensis var. sinensis HOM05D007073 ORTHO05D008855 7.7e-48 193.7 117 88.0
Atru.chr13.338 Acer truncatum HOM05D007073 ORTHO05D008855 6.5e-47 190.7 117 83.8
GSVIVG01009840001 Vitis vinifera HOM05D007073 ORTHO05D008855 6.5e-47 190.7 117 85.5
Haze_22602 Corylus avellana HOM05D000624 ORTHO05D000495 2.1e-45 185.7 116 84.5
COL.COLO4_26179 Corchorus olitorius HOM05D007073 ORTHO05D008855 3.6e-45 184.9 117 82.1
RhsimUnG0148500 Rhododendron simsii HOM05D007073 ORTHO05D008855 3.6e-45 184.9 117 85.5
TAR628G0116 Trochodendron aralioides HOM05D007073 ORTHO05D008855 3.6e-45 184.9 117 82.1
QL02p010904 Quercus lobata HOM05D007073 ORTHO05D008855 1.4e-44 183.0 116 80.2
Sabra05G0182000 Salix brachista HOM05D007073 ORTHO05D008855 1.8e-44 182.6 116 80.2
RcHm_v2.0_Chr6g0272121 Rosa chinensis HOM05D007073 ORTHO05D008855 3.0e-44 181.8 117 79.5
Duzib093G1738 Durio zibethinus HOM05D007073 ORTHO05D008855 4.0e-44 181.4 117 76.9
FvH4_5g30190 Fragaria vesca HOM05D007073 ORTHO05D008855 5.2e-44 181.0 117 79.5
Potri.005G235800 Populus trichocarpa HOM05D007073 ORTHO05D008855 5.2e-44 181.0 116 80.2
TWI56G0686 Tripterygium wilfordii HOM05D007073 ORTHO05D008855 5.2e-44 181.0 117 78.6
CANSAT25G0010 Cannabis sativa HOM05D007073 ORTHO05D008855 2.6e-43 178.7 110 82.7
Nn5g29254 Nelumbo nucifera HOM05D007073 ORTHO05D008855 4.4e-43 177.9 117 81.2
HanXRQChr02g0044001 Helianthus annuus HOM05D007073 ORTHO05D008855 5.7e-43 177.6 117 78.6
Migut.C00802 Erythranthe guttata HOM05D007073 ORTHO05D008855 1.3e-42 176.4 117 78.6
ClCG08G014440 Citrullus lanatus HOM05D007073 ORTHO05D008855 2.8e-42 175.3 118 80.5
Cc04_g14740 Coffea canephora HOM05D007073 ORTHO05D008855 3.7e-42 174.9 111 80.2
vmacro21707 Vaccinium macrocarpon HOM05D007073 ORTHO05D008855 3.7e-42 174.9 112 83.9
Glyma.08G113800 Glycine max HOM05D007073 ORTHO05D008855 4.8e-42 174.5 117 76.9
Oeu054729.1 Olea europaea HOM05D007073 ORTHO05D008855 4.8e-42 174.5 112 82.1
PGR031G0624 Punica granatum HOM05D007073 ORTHO05D008855 8.3e-42 173.7 117 75.2
Eucgr.H01040 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.1e-41 173.3 111 80.2
Eucgr.L01253 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.1e-41 173.3 111 80.2
RcHm_v2.0_Chr6g0302381 Rosa chinensis HOM05D007073 ORTHO05D008855 1.4e-41 172.9 117 76.9
Sed0011824 Sechium edule HOM05D007073 ORTHO05D008855 1.8e-41 172.6 117 80.3
Cc02_g29940 Coffea canephora HOM05D007073 ORTHO05D008855 4.1e-41 171.4 111 78.4
Lsat_1_v5_gn_1_16141 Lactuca sativa HOM05D007073 ORTHO05D008855 4.1e-41 171.4 117 76.1
Manes.18G016450 Manihot esculenta HOM05D007073 ORTHO05D008855 7.0e-41 170.6 115 77.4
AUR62019145 Chenopodium quinoa HOM05D007073 ORTHO05D008855 9.1e-41 170.2 113 77.9
CsaV3_2G029360 Cucumis sativus L. HOM05D007073 ORTHO05D008855 1.2e-40 169.9 117 79.5
SGA_v2.0_scaffold92G28274 Striga asiatica HOM05D007073 ORTHO05D008855 1.2e-40 169.9 112 81.2
Rhsim06G0025500 Rhododendron simsii HOM05D000624 ORTHO05D000495 2.0e-40 169.1 104 87.5
ECA247G1834 Erigeron canadensis HOM05D007073 ORTHO05D008855 3.5e-40 168.3 115 76.5
Lj4g0003370 Lotus japonicus HOM05D007073 ORTHO05D008855 3.5e-40 168.3 111 79.3
VMungo0251G2135 Vigna mungo HOM05D007073 ORTHO05D008855 3.5e-40 168.3 115 75.7
CDE08G0828 Ceratophyllum demersum HOM05D007073 ORTHO05D008855 4.5e-40 167.9 113 77.0
CARHR030330 Cardamine hirsuta HOM05D007073 ORTHO05D008855 5.9e-40 167.5 113 76.1
Thhalv10009135m.g Eutrema salsugineum HOM05D007073 ORTHO05D008855 1.3e-39 166.4 113 74.3
PSO675G5408 Papaver somniferum HOM05D007073 ORTHO05D008855 2.3e-39 165.6 117 73.5
SGA_v2.0_scaffold92G28275 Striga asiatica HOM05D007073 ORTHO05D008855 2.3e-39 165.6 112 80.4
BcaC05g27117 Brassica carinata HOM05D007073 ORTHO05D008855 2.9e-39 165.2 113 74.3
BcaC05g27119 Brassica carinata HOM05D007073 ORTHO05D008855 2.9e-39 165.2 113 74.3
C05p29970 Brassica napus HOM05D007073 ORTHO05D008855 2.9e-39 165.2 113 74.3
BolC5t31732H Brassica oleracea HOM05D007073 ORTHO05D008855 2.9e-39 165.2 113 74.3
BolC5t31736H Brassica oleracea HOM05D007073 ORTHO05D008855 2.9e-39 165.2 113 74.3
HPP92_025607 Vanilla planifolia HOM05D007073 ORTHO05D008855 2.9e-39 165.2 117 71.8
A09p35370 Brassica napus HOM05D007073 ORTHO05D008855 3.8e-39 164.9 113 74.3
PGSC0003DMG400003718 Solanum tuberosum HOM05D007073 ORTHO05D008855 3.8e-39 164.9 106 80.2
Carub.0001s2918 Capsella rubella HOM05D007073 ORTHO05D008855 5.0e-39 164.5 113 75.2
Peaxi162Scf00287g01620 Petunia axillaris HOM05D007073 ORTHO05D008855 5.0e-39 164.5 106 78.3
Psat7g072280 Pisum sativum HOM05D007073 ORTHO05D008855 5.0e-39 164.5 110 77.3
Aa31LG6G9870 Aethionema arabicum HOM05D007073 ORTHO05D008855 6.6e-39 164.1 113 74.3
CANSAT11G0546 Cannabis sativa HOM05D007073 ORTHO05D008855 6.6e-39 164.1 104 80.8
PSO541G6379 Papaver somniferum HOM05D007073 ORTHO05D008855 6.6e-39 164.1 117 71.8
Phvul.002G236200 Phaseolus vulgaris HOM05D007073 ORTHO05D008855 6.6e-39 164.1 115 74.8
Sp1g26740 Schrenkiella parvula HOM05D007073 ORTHO05D008855 8.6e-39 163.7 113 73.5
EL10Ac1g00450 Beta vulgaris HOM05D007073 ORTHO05D008855 1.1e-38 163.3 113 74.3
Solyc04g081160.3 Solanum lycopersicum HOM05D007073 ORTHO05D008855 1.1e-38 163.3 106 79.2
Sopen04g034780 Solanum pennellii HOM05D007073 ORTHO05D008855 1.1e-38 163.3 106 79.2
THA.LOC104810648 Tarenaya hassleriana HOM05D007073 ORTHO05D008855 1.1e-38 163.3 114 73.7
SalBow7G2056 Salvia bowleyana HOM05D007073 ORTHO05D008855 1.5e-38 162.9 112 73.2
unitig_32.g11146 Utricularia gibba HOM05D007073 ORTHO05D008855 1.9e-38 162.5 112 75.9
Glyma.05G155900 Glycine max HOM05D007073 ORTHO05D008855 3.3e-38 161.8 112 74.1
BcaB07g32745 Brassica carinata HOM05D007073 ORTHO05D008855 4.2e-38 161.4 108 75.9
Medtr8g085700 Medicago truncatula HOM05D007073 ORTHO05D008855 4.2e-38 161.4 112 75.9
TPR.G24371 Trifolium pratense HOM05D007073 ORTHO05D008855 4.2e-38 161.4 111 75.7
Ca_17949_v3 Cicer arietinum L. HOM05D007073 ORTHO05D008855 7.2e-38 160.6 111 74.8
Lalb_Chr12g0205331 Lupinus albus HOM05D007073 ORTHO05D008855 9.5e-38 160.2 117 70.9
MSTRG.1215 Avicennia marina HOM05D007073 ORTHO05D008855 2.1e-37 159.1 112 75.0
Zm00001eb403590 Zea mays HOM05D007073 ORTHO05D008855 2.1e-37 159.1 110 74.5
CAN.G1271.5 Capsicum annuum HOM05D007073 ORTHO05D008855 3.6e-37 158.3 106 78.3
CANSAT11G2499 Cannabis sativa HOM05D007073 ORTHO05D008855 6.1e-37 157.5 112 74.1
AT1G30845 Arabidopsis thaliana HOM05D007073 ORTHO05D008855 1.4e-36 156.4 113 70.8
MD15G1015600 Malus domestica HOM05D007073 ORTHO05D008855 1.4e-36 156.4 117 69.2
arahy.Tifrunner.gnm1.ann1.0LW32C Arachis hypogaea HOM05D007073 ORTHO05D008855 1.8e-36 156.0 111 74.8
Zm00001eb001980 Zea mays HOM05D007073 ORTHO05D008855 1.8e-36 156.0 110 73.6
Sc26g0003150 Simmondsia chinensis HOM05D007073 ORTHO05D008855 3.0e-36 155.2 113 72.6
MD08G1016500 Malus domestica HOM05D007073 ORTHO05D008855 8.9e-36 153.7 112 70.5
CiPaw.07G153100 Carya illinoinensis HOM05D007073 ORTHO05D008855 3.4e-35 151.8 115 72.2
arahy.Tifrunner.gnm1.ann1.F1G2D9 Arachis hypogaea HOM05D007073 ORTHO05D008855 3.7e-34 148.3 134 61.9
C05p29960 Brassica napus HOM05D007073 ORTHO05D008855 6.3e-34 147.5 97 76.3
Cfa013916 Carpinus fangiana HOM05D007073 ORTHO05D008855 1.1e-33 146.7 89 84.3
Prupe.1G369500 Prunus persica HOM05D007073 ORTHO05D008855 1.4e-33 146.4 90 82.2
Ciclev10002853m.g Citrus clementina HOM05D007073 ORTHO05D008855 5.4e-33 144.4 105 72.4
ATR0945G003 Amborella trichopoda HOM05D007073 ORTHO05D008855 1.6e-32 142.9 104 71.2
Thecc.08G038900 Theobroma cacao HOM05D007073 ORTHO05D008855 1.6e-32 142.9 89 82.0
FAN13G2867 Fragaria x ananassa HOM05D007073 ORTHO05D008855 3.5e-32 141.7 93 78.5
Gohir.A01G112900 Gossypium hirsutum HOM05D007073 ORTHO05D008855 5.9e-32 141.0 89 80.9
FAN18G2174 Fragaria x ananassa HOM05D007403 ORTHO05D009306 7.8e-32 140.6 89 79.8
AL1G45120 Arabidopsis lyrata HOM05D007073 ORTHO05D008855 2.3e-31 139.0 172 49.4
Actinidia26593 Actinidia chinensis HOM05D007073 ORTHO05D008855 2.9e-31 138.7 91 85.7
Gohir.D01G101000 Gossypium hirsutum HOM05D007073 ORTHO05D008855 5.0e-31 137.9 89 78.7
MELO3C010995.2 Cucumis melo HOM05D007073 ORTHO05D008855 3.3e-30 135.2 90 80.0
AUR62014408 Chenopodium quinoa HOM05D007073 ORTHO05D008855 7.3e-30 134.0 83 81.9
Actinidia37317 Actinidia chinensis HOM05D007073 ORTHO05D008855 1.6e-29 132.9 86 81.4
Nitab4.5_0005185g0010 Nicotiana tabacum HOM05D007073 ORTHO05D008855 1.4e-28 129.8 89 75.3
Peaxi162Scf01591g00005 Petunia axillaris HOM05D007073 ORTHO05D008855 1.8e-28 129.4 83 78.3
Aqoxy6G02335_Aqoxy6G02336 Aquilegia oxysepala HOM05D000558 ORTHO05D001857 2.3e-28 129.0 88 79.5
Os03g0127000 Oryza sativa ssp. japonica HOM05D007073 ORTHO05D008855 7.5e-27 124.0 79 78.5
Eucgr.H01037 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.3e-26 123.2 72 86.1
SEGI_10735 Sequoiadendron giganteum HOM05D007073 ORTHO05D008855 6.4e-26 120.9 115 60.9
DCAR_017499 Daucus carota HOM05D007073 ORTHO05D008855 8.0e-21 104.0 64 85.9
MD13G1087600 Malus domestica HOM05D007073 ORTHO05D008855 1.4e-20 103.2 79 69.6
C05p30020 Brassica napus HOM05D007073 ORTHO05D008855 1.5e-19 99.8 86 59.3
Mapoly0121s0038 Marchantia polymorpha HOM05D007073 ORTHO05D008855 6.4e-18 94.4 108 50.0
Pp3c8_14860 Physcomitrium patens HOM05D007073 ORTHO05D008855 2.1e-16 89.4 108 51.9
BolC5t31739H Brassica oleracea HOM05D007073 ORTHO05D008855 1.7e-15 86.3 67 65.7
FAN04G0335 Fragaria x ananassa HOM05D007403 ORTHO05D009306 1.7e-15 86.3 52 80.8
arahy.Tifrunner.gnm1.ann1.JR36LC Arachis hypogaea HOM05D007073 ORTHO05D008855 1.1e-14 83.6 61 70.5
Eucgr.L01259 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.1e-14 83.6 52 76.9
Actinidia04603 Actinidia chinensis HOM05D007073 ORTHO05D008855 2.5e-14 82.4 60 78.3
AagrBONN_evm.TU.Sc2ySwM_344.4448 Anthoceros agrestis HOM05D007073 ORTHO05D008855 8.1e-13 77.4 85 47.1
BcaC05g27114 Brassica carinata HOM05D007073 ORTHO05D008855 4.9e-10 68.2 108 41.7


User provided reference genes

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