Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv31754 Davidia involucrata HOM05D009231 ORTHO05D010800 5.0e-108 394.4 197 100.0
Actinidia32045 Actinidia chinensis HOM05D009231 ORTHO05D010800 4.2e-38 162.2 174 52.3
Hma1.2p1_0079F.1_g041880 Hydrangea macrophylla HOM05D009231 ORTHO05D010800 6.7e-36 154.8 194 50.0
Nn6g34706 Nelumbo nucifera HOM05D009231 ORTHO05D010800 1.3e-31 140.6 178 46.6
Nn2g14291 Nelumbo nucifera HOM05D009231 ORTHO05D010800 1.4e-30 137.1 182 50.0
Manes.08G032900 Manihot esculenta HOM05D009231 ORTHO05D010800 4.6e-29 132.1 169 47.3
TAR636G0160 Trochodendron aralioides HOM05D009231 ORTHO05D010800 1.0e-28 131.0 178 46.1
Cfa021528 Carpinus fangiana HOM05D009231 ORTHO05D010800 1.8e-28 130.2 174 47.1
Haze_07057 Corylus avellana HOM05D009231 ORTHO05D010800 8.8e-28 127.9 174 46.0
Thecc.05G103300 Theobroma cacao HOM05D009231 ORTHO05D010800 9.7e-27 124.4 179 44.7
TAR633G1440 Trochodendron aralioides HOM05D009231 ORTHO05D010800 1.7e-26 123.6 211 41.2
Actinidia03894 Actinidia chinensis HOM05D009231 ORTHO05D010800 2.4e-25 119.8 176 44.9
Manes.09G044800 Manihot esculenta HOM05D009231 ORTHO05D010800 2.6e-24 116.3 168 42.3
Gorai.002G235600 Gossypium raimondii HOM05D009231 ORTHO05D010800 3.4e-24 115.9 177 42.9
Duzib093G0513 Durio zibethinus HOM05D009231 ORTHO05D010800 1.3e-23 114.0 178 43.3
Gohir.A01G201800 Gossypium hirsutum HOM05D009231 ORTHO05D010800 5.0e-23 112.1 177 42.4
Gohir.D01G191700 Gossypium hirsutum HOM05D009231 ORTHO05D010800 1.1e-22 110.9 177 41.8
GSVIVG01033951001 Vitis vinifera HOM05D009231 ORTHO05D010800 4.7e-21 105.5 178 41.0
MD12G1039600 Malus domestica HOM05D015804 ORTHO05D010800 2.6e-19 99.8 173 39.3
Cpa.g.sc104.38 Carica papaya HOM05D009231 ORTHO05D010800 9.7e-19 97.8 179 38.0
CiPaw.09G020600 Carya illinoinensis HOM05D007097 ORTHO05D008131 2.2e-18 96.7 179 39.7
Prupe.7G095600 Prunus persica HOM05D015804 ORTHO05D010800 2.4e-17 93.2 171 39.2
QL07p036848 Quercus lobata HOM05D009231 ORTHO05D010800 1.5e-14 84.0 181 37.0
RcHm_v2.0_Chr3g0475841 Rosa chinensis HOM05D015804 ORTHO05D010800 4.2e-14 82.4 176 36.4
Duzib106G2060 Durio zibethinus HOM05D009231 ORTHO05D010800 2.1e-13 80.1 131 38.2
Nitab4.5_0002958g0010 Nicotiana tabacum HOM05D019826 ORTHO05D022411 8.0e-13 78.2 216 35.2
Oeu052622.2 Olea europaea HOM05D022101 ORTHO05D022209 3.3e-11 72.8 193 35.8
ATR0772G209 Amborella trichopoda HOM05D009231 ORTHO05D010800 8.2e-10 68.2 74 52.7
PGR142G1154 Punica granatum HOM05D009231 ORTHO05D010800 4.5e-08 62.4 188 33.5
Dinv08588 Davidia involucrata HOM05D030328 ORTHO05D026420 7.7e-08 61.6 166 30.1
Aqoxy1G00673 Aquilegia oxysepala HOM05D009231 ORTHO05D010800 2.9e-07 59.7 207 28.5
FAN02G3496 Fragaria x ananassa HOM05D015804 ORTHO05D010800 2.9e-07 59.7 177 38.4
PGSC0003DMG400016422 Solanum tuberosum HOM05D019826 ORTHO05D022411 2.9e-07 59.7 212 34.0
COL.COLO4_29583 Corchorus olitorius HOM05D009231 ORTHO05D010800 2.5e-06 56.6 88 42.0


User provided reference genes

Program Settings