Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv31596 Davidia involucrata HOM05D005909 ORTHO05D007481 1.3e-165 586.3 295 100.0
CSS0033004 Camellia sinensis var. sinensis HOM05D005909 ORTHO05D007481 2.0e-137 492.7 332 76.8
Hma1.2p1_2306F.1_g319360 Hydrangea macrophylla HOM05D005909 ORTHO05D007481 1.2e-134 483.4 332 74.4
Hma1.2p1_1314F.1_g274990 Hydrangea macrophylla HOM05D005909 ORTHO05D007481 1.8e-133 479.6 332 73.8
TAR622G1259 Trochodendron aralioides HOM05D005909 ORTHO05D007481 3.3e-132 475.3 332 73.8
Actinidia14921 Actinidia chinensis HOM05D005909 ORTHO05D007481 1.8e-130 469.5 332 73.8
Cc11_g09670 Coffea canephora HOM05D005909 ORTHO05D007481 1.2e-129 466.8 332 73.5
QL01p010815 Quercus lobata HOM05D005909 ORTHO05D007481 2.0e-129 466.1 331 72.5
QL93p0145_0024 Quercus lobata HOM05D005909 ORTHO05D007481 2.0e-129 466.1 331 72.5
GSVIVG01011843001 Vitis vinifera HOM05D005909 ORTHO05D007481 3.5e-129 465.3 328 74.7
vmacro10599 Vaccinium macrocarpon HOM05D005909 ORTHO05D007481 4.5e-129 464.9 332 72.6
Cfa015837 Carpinus fangiana HOM05D005909 ORTHO05D007481 6.5e-128 461.1 332 72.3
Nn4g23953 Nelumbo nucifera HOM05D005909 ORTHO05D007481 1.5e-127 459.9 332 71.1
Prupe.1G316800 Prunus persica HOM05D005909 ORTHO05D007481 1.5e-127 459.9 327 71.9
DCAR_007264 Daucus carota HOM05D005909 ORTHO05D007481 4.2e-127 458.4 332 71.7
Rhsim09G0103900 Rhododendron simsii HOM05D005909 ORTHO05D007481 5.5e-127 458.0 348 69.3
Sabra10G0090400 Salix brachista HOM05D005909 ORTHO05D007481 5.5e-127 458.0 332 71.4
Atru.chr11.237 Acer truncatum HOM05D005909 ORTHO05D007481 1.2e-126 456.8 332 71.1
RcHm_v2.0_Chr4g0434411 Rosa chinensis HOM05D005909 ORTHO05D007481 2.1e-126 456.1 330 70.6
CAN.G610.24 Capsicum annuum HOM05D005909 ORTHO05D007481 8.0e-126 454.1 331 71.0
CiPaw.05G242600 Carya illinoinensis HOM05D005909 ORTHO05D007481 8.0e-126 454.1 332 71.1
Potri.010G120200 Populus trichocarpa HOM05D005909 ORTHO05D007481 8.8e-125 450.7 332 71.1
MD16G1037200 Malus domestica HOM05D005909 ORTHO05D007481 2.6e-124 449.1 330 70.9
TPR.G4906 Trifolium pratense HOM05D005909 ORTHO05D007481 2.6e-124 449.1 332 69.0
Ciclev10015519m.g Citrus clementina HOM05D005909 ORTHO05D007481 3.4e-124 448.7 332 69.3
Solyc05g008870.3 Solanum lycopersicum HOM05D005909 ORTHO05D007481 3.4e-124 448.7 331 69.5
Sopen05g004630 Solanum pennellii HOM05D005909 ORTHO05D007481 3.4e-124 448.7 331 69.5
Lalb_Chr21g0308731 Lupinus albus HOM05D005909 ORTHO05D007481 1.7e-123 446.4 332 70.2
Nitab4.5_0002112g0090 Nicotiana tabacum HOM05D005909 ORTHO05D007481 1.7e-123 446.4 331 69.5
Ca_06889_v3 Cicer arietinum L. HOM05D005909 ORTHO05D007481 1.8e-122 443.0 332 68.7
FvH4_4g26720 Fragaria vesca HOM05D005909 ORTHO05D007481 4.1e-122 441.8 327 69.1
Glyma.20G120600 Glycine max HOM05D005909 ORTHO05D007481 7.0e-122 441.0 332 66.6
TWI79G1572 Tripterygium wilfordii HOM05D005909 ORTHO05D007481 7.0e-122 441.0 332 69.0
Lj5g0016761 Lotus japonicus HOM05D005909 ORTHO05D007481 2.0e-121 439.5 332 67.5
COL.COLO4_32148 Corchorus olitorius HOM05D005909 ORTHO05D007481 4.5e-121 438.3 331 67.7
MBI16_g44832_MAGBIO Magnolia biondii HOM05D005909 ORTHO05D007481 5.9e-121 438.0 331 69.2
Lsat_1_v5_gn_3_62021 Lactuca sativa HOM05D005909 ORTHO05D007481 1.0e-120 437.2 329 69.0
VMungo0720G1068 Vigna mungo HOM05D005909 ORTHO05D007481 1.3e-120 436.8 332 66.6
Psat6g224680 Pisum sativum HOM05D005909 ORTHO05D007481 5.0e-120 434.9 332 67.5
HanXRQChr15g0477421 Helianthus annuus HOM05D005909 ORTHO05D007481 6.6e-120 434.5 332 67.5
Nitab4.5_0000694g0120 Nicotiana tabacum HOM05D005909 ORTHO05D007481 6.6e-120 434.5 331 68.6
arahy.Tifrunner.gnm1.ann1.W577BF Arachis hypogaea HOM05D005909 ORTHO05D007481 8.6e-120 434.1 332 66.6
Medtr1g109590 Medicago truncatula HOM05D005909 ORTHO05D007481 1.9e-119 433.0 330 67.0
Manes.06G064900 Manihot esculenta HOM05D005909 ORTHO05D007481 3.3e-119 432.2 310 73.2
PGR119G2457 Punica granatum HOM05D005909 ORTHO05D007481 3.3e-119 432.2 331 66.5
arahy.Tifrunner.gnm1.ann1.IU6D7D Arachis hypogaea HOM05D005909 ORTHO05D007481 9.5e-119 430.6 333 66.1
MSTRG.13555 Avicennia marina HOM05D005909 ORTHO05D007481 9.5e-119 430.6 331 67.7
ECA246G0525 Erigeron canadensis HOM05D005909 ORTHO05D007481 1.6e-118 429.9 334 66.2
FAN07G1481 Fragaria x ananassa HOM05D005909 ORTHO05D007481 1.6e-118 429.9 351 64.7
PSO782G5715 Papaver somniferum HOM05D005909 ORTHO05D007481 2.1e-118 429.5 332 66.9
Duzib248G1493 Durio zibethinus HOM05D005909 ORTHO05D007481 3.6e-118 428.7 331 67.4
Eucgr.G02238 Eucalyptus grandis HOM05D005909 ORTHO05D007481 3.6e-118 428.7 331 65.6
MELO3C005340.2 Cucumis melo HOM05D005909 ORTHO05D007481 6.1e-118 427.9 331 67.1
CsaV3_5G028790 Cucumis sativus L. HOM05D005909 ORTHO05D007481 8.0e-118 427.6 331 66.5
Gohir.D02G171900 Gossypium hirsutum HOM05D005909 ORTHO05D007481 1.0e-117 427.2 333 67.0
Sed0017467 Sechium edule HOM05D005909 ORTHO05D007481 1.4e-117 426.8 332 67.2
Dinv16136 Davidia involucrata HOM05D005909 ORTHO05D007481 2.3e-117 426.0 328 71.0
Lj6A753G52 Lonicera japonica HOM05D005909 ORTHO05D007481 1.5e-116 423.3 331 67.7
SalBow8G3248 Salvia bowleyana HOM05D005909 ORTHO05D007481 3.4e-116 422.2 331 65.9
Aqoxy3G04056 Aquilegia oxysepala HOM05D005909 ORTHO05D007481 7.5e-116 421.0 331 67.1
Gorai.005G193400 Gossypium raimondii HOM05D005909 ORTHO05D007481 7.5e-116 421.0 340 65.9
Gohir.A03G148900 Gossypium hirsutum HOM05D005909 ORTHO05D007481 1.3e-115 420.2 340 65.9
Phvul.007G032000 Phaseolus vulgaris HOM05D005909 ORTHO05D007481 7.0e-114 414.5 332 64.2
Hund20744 Selenicereus undatus HOM05D005909 ORTHO05D007481 1.2e-113 413.7 329 64.4
SalBow8G0352 Salvia bowleyana HOM05D005909 ORTHO05D007481 2.7e-113 412.5 338 64.2
Haze_00654 Corylus avellana HOM05D005909 ORTHO05D007481 7.8e-113 411.0 464 52.4
Sc14g0007280 Simmondsia chinensis HOM05D005909 ORTHO05D007481 2.9e-112 409.1 333 66.1
BcaC06g34207 Brassica carinata HOM05D005909 ORTHO05D007481 6.6e-112 407.9 330 63.0
THA.LOC104823950 Tarenaya hassleriana HOM05D005909 ORTHO05D007481 1.1e-111 407.1 331 64.4
C07p31670 Brassica napus HOM05D005909 ORTHO05D007481 4.3e-111 405.2 331 63.1
BolC7t43706H Brassica oleracea HOM05D005909 ORTHO05D007481 4.3e-111 405.2 331 63.1
AT2G01220 Arabidopsis thaliana HOM05D005909 ORTHO05D007481 1.4e-109 400.2 330 63.0
EL10Ac6g14305 Beta vulgaris HOM05D005909 ORTHO05D007481 4.0e-109 398.7 327 61.5
CARHR143760 Cardamine hirsuta HOM05D005909 ORTHO05D007481 4.0e-109 398.7 330 62.7
Migut.E00369 Erythranthe guttata HOM05D005909 ORTHO05D007481 4.0e-109 398.7 364 60.2
Ah.03g138370 Amaranthus hybridus HOM05D005909 ORTHO05D007481 5.2e-109 398.3 331 61.6
AL5G10170 Arabidopsis lyrata HOM05D005909 ORTHO05D007481 1.2e-108 397.1 330 62.4
ClCG01G005900 Citrullus lanatus HOM05D005909 ORTHO05D007481 1.5e-108 396.7 304 68.1
CDE08G1136 Ceratophyllum demersum HOM05D005909 ORTHO05D007481 4.4e-108 395.2 329 61.1
ATR0807G244 Amborella trichopoda HOM05D005909 ORTHO05D007481 7.5e-108 394.4 330 60.6
A06p44550 Brassica napus HOM05D005909 ORTHO05D007481 1.7e-107 393.3 331 61.0
Sp2g12680 Schrenkiella parvula HOM05D005909 ORTHO05D007481 1.7e-107 393.3 329 60.2
FAN12G0127 Fragaria x ananassa HOM05D005909 ORTHO05D007481 8.3e-107 391.0 290 69.0
AUR62037268 Chenopodium quinoa HOM05D005909 ORTHO05D007481 1.4e-106 390.2 327 60.9
BraA06t27329Z Brassica rapa HOM05D005909 ORTHO05D007481 1.9e-106 389.8 336 60.7
AUR62002812 Chenopodium quinoa HOM05D005909 ORTHO05D007481 3.2e-106 389.0 327 60.9
Aa31LG2G8670 Aethionema arabicum HOM05D005909 ORTHO05D007481 1.2e-105 387.1 330 61.2
unitig_699.g19483 Utricularia gibba HOM05D005909 ORTHO05D007481 3.0e-104 382.5 331 61.6
FAN22G0620 Fragaria x ananassa HOM05D005909 ORTHO05D007481 6.6e-104 381.3 290 67.6
PSO063G1187 Papaver somniferum HOM05D005909 ORTHO05D007481 3.6e-102 375.6 295 66.4
Cpa.g.sc65.66 Carica papaya HOM05D005909 ORTHO05D007481 1.8e-101 373.2 331 60.7
Zm00001eb360650 Zea mays HOM05D005909 ORTHO05D007481 5.2e-101 371.7 331 58.6
FAN12G0185 Fragaria x ananassa HOM05D005909 ORTHO05D007481 8.9e-101 370.9 306 64.1
HPP92_024514 Vanilla planifolia HOM05D005909 ORTHO05D007481 5.8e-100 368.2 326 59.8
Thhalv10000909m.g Eutrema salsugineum HOM05D005909 ORTHO05D007481 2.9e-99 365.9 330 59.1
Peaxi162Scf00179g00534 Petunia axillaris HOM05D005909 ORTHO05D007481 6.4e-99 364.8 331 60.7
AL5G17030 Arabidopsis lyrata HOM05D005909 ORTHO05D007481 5.4e-98 361.7 331 57.4
CARHR148990 Cardamine hirsuta HOM05D005909 ORTHO05D007481 6.0e-97 358.2 330 56.4
AT3G27610 Arabidopsis thaliana HOM05D005909 ORTHO05D007481 1.6e-94 350.1 331 56.2
Carub.0005s0605 Capsella rubella HOM05D005909 ORTHO05D007481 5.2e-93 345.1 331 56.2
Thecc.02G222000 Theobroma cacao HOM05D005909 ORTHO05D007481 6.8e-93 344.7 219 79.5
CANSAT01G0643 Cannabis sativa HOM05D005909 ORTHO05D007481 7.8e-89 331.3 264 65.2
TAR622G0977 Trochodendron aralioides HOM05D005909 ORTHO05D007481 5.6e-87 325.1 234 71.8
FAN17G2694 Fragaria x ananassa HOM05D005909 ORTHO05D007481 1.2e-81 307.4 229 68.1
Oeu027686.1 Olea europaea HOM05D005909 ORTHO05D007481 7.8e-81 304.7 357 52.4
Actinidia16683 Actinidia chinensis HOM05D005909 ORTHO05D007481 5.1e-80 302.0 219 73.1
Carub.0005s0021 Capsella rubella HOM05D005909 ORTHO05D007481 2.1e-78 296.6 266 59.0
Os01g0691500 Oryza sativa ssp. japonica HOM05D005909 ORTHO05D007481 3.2e-74 282.7 218 65.6
AagrBONN_evm.TU.Sc2ySwM_362.1435 Anthoceros agrestis HOM05D004406 ORTHO05D005660 3.3e-71 272.7 326 46.0
SGA_v2.0_scaffold14G06904 Striga asiatica HOM05D005909 ORTHO05D007481 1.8e-69 266.9 183 76.5
Mapoly0100s0051 Marchantia polymorpha HOM05D005909 ORTHO05D007481 2.4e-69 266.5 329 44.4
Pp3c3_16750 Physcomitrium patens HOM05D005909 ORTHO05D007481 7.9e-65 251.5 333 42.9
Pp3c12_7340 Physcomitrium patens HOM05D005909 ORTHO05D007481 6.7e-64 248.4 326 43.6
SMO196G0003 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 8.7e-64 248.1 351 41.0
Carub.0005s0593 Capsella rubella HOM05D005909 ORTHO05D007481 2.5e-50 203.4 188 58.5
PGSC0003DMG401030529 Solanum tuberosum HOM05D005909 ORTHO05D007481 3.2e-34 149.8 99 78.8
CBR_g39317 Chara braunii HOM05D005909 ORTHO05D007481 6.3e-30 135.6 183 42.1
MCO06G004 Micromonas commoda HOM05D005909 ORTHO05D007481 2.6e-28 130.2 334 29.6
SGA_v2.0_scaffold14G06901 Striga asiatica HOM05D005909 ORTHO05D007481 1.7e-27 127.5 75 77.3
PRCOL_00006609 Prasinoderma coloniale HOM05D005909 ORTHO05D007481 3.2e-26 123.2 365 28.2
Cre06.g278116 Chlamydomonas reinhardtii HOM05D005909 ORTHO05D007481 7.2e-26 122.1 379 29.3
CiPaw.05G241800 Carya illinoinensis HOM05D005909 ORTHO05D007481 2.3e-24 117.1 66 86.4
SEGI_08541 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 2.3e-24 117.1 100 58.0
arahy.Tifrunner.gnm1.ann1.XNS652 Arachis hypogaea HOM05D005909 ORTHO05D007481 1.7e-22 110.9 147 50.3
TPR.G28941 Trifolium pratense HOM05D000324 ORTHO05D004875 8.2e-22 108.6 88 67.0
SEGI_29486 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 1.6e-20 104.4 78 64.1
Oeu027687.1 Olea europaea HOM05D005909 ORTHO05D007481 2.2e-19 100.5 61 80.3
SMO265G0018 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 1.1e-18 98.2 155 39.4
SMO163G0092 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 9.4e-18 95.1 149 38.9
SEGI_32432 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 5.7e-15 85.9 70 55.7
CBR_g39316 Chara braunii HOM05D000019 ORTHO05D000002 5.9e-12 75.9 85 47.1
SMO146G0235 Selaginella moellendorffii HOM05D020292 ORTHO05D030583 8.5e-11 72.0 109 39.4
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.2e-07 61.6 89 38.2


User provided reference genes

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