Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv31583 Davidia involucrata HOM05D006456 ORTHO05D007588 1.8e-106 389.4 221 100.0
CSS0027890 Camellia sinensis var. sinensis HOM05D006456 ORTHO05D007588 3.2e-79 298.9 222 70.7
GSVIVG01011822001 Vitis vinifera HOM05D006456 ORTHO05D007588 1.2e-78 297.0 222 72.1
Rhsim12G0086900 Rhododendron simsii HOM05D006456 ORTHO05D007588 4.6e-78 295.0 221 68.8
TAR629G3159 Trochodendron aralioides HOM05D006456 ORTHO05D007588 1.0e-77 293.9 216 74.1
CiPaw.05G243600 Carya illinoinensis HOM05D006456 ORTHO05D007588 1.1e-74 283.9 224 71.0
Haze_00665 Corylus avellana HOM05D006456 ORTHO05D007588 1.9e-71 273.1 217 70.0
QL01p003354 Quercus lobata HOM05D006456 ORTHO05D007588 1.9e-71 273.1 224 67.4
Prupe.1G318000 Prunus persica HOM05D006456 ORTHO05D007588 1.2e-70 270.4 221 66.1
vmacro01410 Vaccinium macrocarpon HOM05D006456 ORTHO05D007588 7.9e-70 267.7 221 63.8
Nn4g23975 Nelumbo nucifera HOM05D006456 ORTHO05D007588 6.7e-69 264.6 221 66.1
CiPaw.06G016000 Carya illinoinensis HOM05D006456 ORTHO05D007588 3.7e-67 258.8 224 66.1
Oeu027684.2 Olea europaea HOM05D006456 ORTHO05D007588 3.1e-66 255.8 226 62.4
Oeu014300.2 Olea europaea HOM05D006456 ORTHO05D007588 5.3e-66 255.0 226 62.4
MD13G1034500 Malus domestica HOM05D006456 ORTHO05D007588 1.0e-64 250.8 219 62.1
MD16G1036000 Malus domestica HOM05D006456 ORTHO05D007588 1.0e-64 250.8 218 64.2
Nitab4.5_0001999g0020 Nicotiana tabacum HOM05D006456 ORTHO05D007588 1.3e-64 250.4 224 62.5
Cc11_g09550 Coffea canephora HOM05D006456 ORTHO05D007588 5.0e-64 248.4 227 65.2
CAN.G99.9 Capsicum annuum HOM05D006456 ORTHO05D007588 1.5e-63 246.9 224 62.1
Sopen03g020360 Solanum pennellii HOM05D006456 ORTHO05D007588 4.2e-63 245.4 227 61.2
Solyc03g013030.3 Solanum lycopersicum HOM05D006456 ORTHO05D007588 5.5e-63 245.0 227 61.2
CANSAT01G2803 Cannabis sativa HOM05D006456 ORTHO05D007588 4.7e-62 241.9 224 59.4
MSTRG.2210 Avicennia marina HOM05D006456 ORTHO05D007588 1.0e-61 240.7 226 58.8
Duzib248G0017 Durio zibethinus HOM05D006456 ORTHO05D007588 1.0e-61 240.7 225 64.0
Thecc.02G220100 Theobroma cacao HOM05D006456 ORTHO05D007588 1.8e-61 240.0 216 63.0
Manes.06G064100 Manihot esculenta HOM05D006456 ORTHO05D007588 1.1e-60 237.3 225 61.3
Lsat_1_v5_gn_3_56960 Lactuca sativa HOM05D006456 ORTHO05D007588 1.1e-58 230.7 224 61.6
Ciclev10016584m.g Citrus clementina HOM05D006456 ORTHO05D007588 2.4e-58 229.6 228 64.9
MBI16_g14292_MAGBIO Magnolia biondii HOM05D006456 ORTHO05D007588 4.1e-58 228.8 222 62.2
Gohir.D05G316500 Gossypium hirsutum HOM05D006456 ORTHO05D007588 5.3e-58 228.4 224 60.3
Gorai.009G338700 Gossypium raimondii HOM05D006456 ORTHO05D007588 5.3e-58 228.4 224 60.3
Atru.chr11.273 Acer truncatum HOM05D006456 ORTHO05D007588 1.6e-57 226.9 225 60.0
Gohir.A05G315000 Gossypium hirsutum HOM05D006456 ORTHO05D007588 2.0e-57 226.5 221 59.3
TWI75G0343 Tripterygium wilfordii HOM05D006456 ORTHO05D007588 2.7e-57 226.1 221 59.3
unitig_52.g17127 Utricularia gibba HOM05D006456 ORTHO05D007588 1.0e-56 224.2 229 58.1
DCAR_007270 Daucus carota HOM05D006456 ORTHO05D007588 1.7e-56 223.4 222 56.3
Aqoxy3G00186 Aquilegia oxysepala HOM05D006456 ORTHO05D007588 2.1e-54 216.5 218 58.3
Sc11g0003890 Simmondsia chinensis HOM05D006456 ORTHO05D007588 2.1e-54 216.5 268 49.3
Lalb_Chr17g0338791 Lupinus albus HOM05D006456 ORTHO05D007588 2.7e-54 216.1 220 55.0
Lalb_Chr10g0096361 Lupinus albus HOM05D006456 ORTHO05D007588 3.6e-54 215.7 222 58.1
FAN17G0635 Fragaria x ananassa HOM05D006456 ORTHO05D007588 8.0e-54 214.5 220 55.5
HanXRQChr15g0477811 Helianthus annuus HOM05D006456 ORTHO05D007588 3.0e-53 212.6 220 55.0
Glyma.10G269500 Glycine max HOM05D006456 ORTHO05D007588 4.0e-53 212.2 224 55.4
Hund25025 Selenicereus undatus HOM05D006456 ORTHO05D007588 5.2e-53 211.8 222 53.2
FvH4_4g26560 Fragaria vesca HOM05D006456 ORTHO05D007588 6.8e-53 211.5 220 53.6
PSO017G1436 Papaver somniferum HOM05D006456 ORTHO05D007588 1.2e-52 210.7 219 59.4
PGR119G2311 Punica granatum HOM05D006456 ORTHO05D007588 1.5e-52 210.3 228 53.1
FAN22G1705 Fragaria x ananassa HOM05D006456 ORTHO05D007588 2.6e-52 209.5 227 53.3
FAN12G2031 Fragaria x ananassa HOM05D006456 ORTHO05D007588 7.5e-52 208.0 227 53.7
Glyma.20G121600 Glycine max HOM05D006456 ORTHO05D007588 7.5e-52 208.0 223 54.7
FAN07G1047 Fragaria x ananassa HOM05D006456 ORTHO05D008764 3.7e-51 205.7 226 54.0
FAN12G0878 Fragaria x ananassa HOM05D006456 ORTHO05D007588 4.8e-51 205.3 226 53.5
Peaxi162Scf00520g00114 Petunia axillaris HOM05D006456 ORTHO05D007588 4.8e-51 205.3 180 64.4
PGSC0003DMG400010378 Solanum tuberosum HOM05D006456 ORTHO05D007588 4.8e-51 205.3 188 59.6
HanXRQChr17g0556631 Helianthus annuus HOM05D006456 ORTHO05D007588 1.1e-50 204.1 224 53.1
PSO478G4574 Papaver somniferum HOM05D006456 ORTHO05D007588 1.1e-50 204.1 219 57.1
ECA246G1061 Erigeron canadensis HOM05D006456 ORTHO05D007588 7.0e-50 201.4 219 56.2
Atru.chr11.288 Acer truncatum HOM05D006456 ORTHO05D007588 9.1e-50 201.1 224 54.9
Aa31sc140G50 Aethionema arabicum HOM05D006456 ORTHO05D007588 2.0e-49 199.9 221 50.7
SGA_v2.0_scaffold170G38812 Striga asiatica HOM05D006456 ORTHO05D007588 2.7e-49 199.5 241 49.4
AUR62014103 Chenopodium quinoa HOM05D006456 ORTHO05D007588 4.5e-49 198.7 227 55.5
Lj5g0005162 Lotus japonicus HOM05D006456 ORTHO05D007588 2.9e-48 196.1 219 52.5
Phvul.007G033000 Phaseolus vulgaris HOM05D006456 ORTHO05D007588 6.5e-48 194.9 214 51.9
Cpa.g.sc65.75 Carica papaya HOM05D006456 ORTHO05D007588 1.1e-47 194.1 198 58.1
AUR62002792 Chenopodium quinoa HOM05D006456 ORTHO05D007588 3.2e-47 192.6 228 53.1
ClCG05G022400 Citrullus lanatus HOM05D006456 ORTHO05D007588 5.5e-47 191.8 230 53.5
AT1G68185 Arabidopsis thaliana HOM05D006456 ORTHO05D007588 1.2e-46 190.7 222 50.9
RcHm_v2.0_Chr4g0434211 Rosa chinensis HOM05D006456 ORTHO05D007588 2.1e-46 189.9 220 56.4
Lj6P752T19 Lonicera japonica HOM05D006456 ORTHO05D007588 3.6e-46 189.1 127 78.0
C06p37830 Brassica napus HOM05D006456 ORTHO05D007588 1.4e-45 187.2 222 51.4
Carub.0002s1467 Capsella rubella HOM05D006456 ORTHO05D007588 1.8e-45 186.8 222 49.5
THA.LOC104801669 Tarenaya hassleriana HOM05D006456 ORTHO05D007588 1.8e-45 186.8 223 49.8
CDE07G1334 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 4.0e-45 185.7 219 50.2
MELO3C012283.2 Cucumis melo HOM05D006456 ORTHO05D007588 4.0e-45 185.7 226 50.0
Sed0027511 Sechium edule HOM05D006456 ORTHO05D007588 8.8e-45 184.5 231 52.8
arahy.Tifrunner.gnm1.ann1.UW2YW6 Arachis hypogaea HOM05D006456 ORTHO05D007588 1.2e-44 184.1 223 52.0
CARHR060870 Cardamine hirsuta HOM05D006456 ORTHO05D007588 2.6e-44 183.0 219 52.5
Potri.010G118900 Populus trichocarpa HOM05D006456 ORTHO05D007588 2.6e-44 183.0 226 54.9
BcaC08g45988 Brassica carinata HOM05D006456 ORTHO05D007588 4.4e-44 182.2 224 50.0
CsaV3_5G034690 Cucumis sativus L. HOM05D006456 ORTHO05D007588 7.5e-44 181.4 224 49.6
arahy.Tifrunner.gnm1.ann1.WCM1NC Arachis hypogaea HOM05D006456 ORTHO05D007588 3.7e-43 179.1 221 56.6
Migut.E00381 Erythranthe guttata HOM05D006456 ORTHO05D007588 1.4e-42 177.2 129 69.8
Medtr1g109370 Medicago truncatula HOM05D006456 ORTHO05D007588 1.8e-42 176.8 226 51.8
Thhalv10019127m.g Eutrema salsugineum HOM05D006456 ORTHO05D007588 2.4e-42 176.4 218 48.2
Psat6g223800 Pisum sativum HOM05D006456 ORTHO05D007588 7.0e-42 174.9 227 48.0
TPR.G4830 Trifolium pratense HOM05D006456 ORTHO05D007588 9.2e-42 174.5 238 46.2
ATR0053G055 Amborella trichopoda HOM05D006456 ORTHO05D007588 3.5e-41 172.6 219 48.4
A07p32110 Brassica napus HOM05D006456 ORTHO05D007588 3.5e-41 172.6 218 49.5
AL2G27020 Arabidopsis lyrata HOM05D006456 ORTHO05D007588 7.7e-41 171.4 219 47.0
Ca_11124_v3 Cicer arietinum L. HOM05D006456 ORTHO05D007588 1.0e-40 171.0 229 50.2
BcaB03g15404 Brassica carinata HOM05D006456 ORTHO05D007588 2.9e-40 169.5 215 46.0
VMungo0720G1166 Vigna mungo HOM05D006456 ORTHO05D007588 7.3e-39 164.9 215 51.2
Ah.02g128170 Amaranthus hybridus HOM05D006456 ORTHO05D007588 1.2e-38 164.1 229 46.3
EL10Ac6g14282 Beta vulgaris HOM05D006456 ORTHO05D007588 1.2e-38 164.1 221 47.1
Sp5g23190 Schrenkiella parvula HOM05D006456 ORTHO05D007588 6.1e-38 161.8 234 44.4
Nitab4.5_0012897g0010 Nicotiana tabacum HOM05D006456 ORTHO05D007588 1.2e-36 157.5 176 54.5
Eucgr.G02230 Eucalyptus grandis HOM05D006456 ORTHO05D007588 1.3e-35 154.1 222 50.0
HPP92_004876 Vanilla planifolia HOM05D006456 ORTHO05D007588 1.8e-34 150.2 228 48.2
HanXRQChr17g0556611 Helianthus annuus HOM05D006456 ORTHO05D007588 7.0e-34 148.3 136 56.6
HPP92_004850 Vanilla planifolia HOM05D006456 ORTHO05D007588 7.0e-34 148.3 228 47.8
Sed0026587 Sechium edule HOM05D006456 ORTHO05D007588 2.7e-33 146.4 170 52.4
CsaV3_5G006740 Cucumis sativus L. HOM05D006456 ORTHO05D007588 5.0e-32 142.1 234 41.0
Sabra10G0089400 Salix brachista HOM05D006456 ORTHO05D007588 1.9e-31 140.2 325 37.5
Os01g0607300 Oryza sativa ssp. japonica HOM05D006456 ORTHO05D007588 3.1e-29 132.9 221 40.3
Zm00001eb357890 Zea mays HOM05D006456 ORTHO05D007588 2.0e-28 130.2 224 43.8
BolC6t38884H Brassica oleracea HOM05D006456 ORTHO05D007588 9.8e-28 127.9 123 53.7
BraA07t30839Z Brassica rapa HOM05D006456 ORTHO05D007588 4.1e-26 122.5 118 54.2
Actinidia31998 Actinidia chinensis HOM05D006456 ORTHO05D007588 1.0e-16 91.3 85 57.6
COL.COLO4_36793 Corchorus olitorius HOM05D006456 ORTHO05D007588 8.6e-16 88.2 53 77.4
Pp3c14_19600 Physcomitrium patens HOM05D006456 ORTHO05D007588 1.9e-15 87.0 239 30.1
Pp3c2_12120 Physcomitrium patens HOM05D006456 ORTHO05D007588 8.1e-14 81.6 236 29.2
CDE06G0604 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 5.2e-13 79.0 111 44.1
Mapoly0066s0083 Marchantia polymorpha HOM05D006456 ORTHO05D007588 8.9e-13 78.2 236 31.4
SHI16262 Sapria himalayana HOM05D006456 ORTHO05D007588 4.9e-11 72.4 203 33.5
SHI16259 Sapria himalayana HOM05D006456 ORTHO05D007588 1.4e-10 70.9 50 68.0
DCAR_030021 Daucus carota HOM05D000984 ORTHO05D007588 8.6e-08 61.6 91 34.1
SEGI_26799 Sequoiadendron giganteum HOM05D006456 ORTHO05D007588 1.5e-07 60.8 80 42.5
DCAR_030977 Daucus carota HOM05D000984 ORTHO05D007588 2.5e-07 60.1 91 34.1
CBR_g17172 Chara braunii HOM05D006456 ORTHO05D007588 5.6e-07 58.9 88 34.1
Cre16.g675637 Chlamydomonas reinhardtii HOM05D000984 ORTHO05D001096 1.2e-06 57.8 82 34.1
Actinidia38361 Actinidia chinensis HOM05D000279 ORTHO05D000957 1.6e-06 57.4 43 58.1
BolC6t38885H Brassica oleracea HOM05D006456 ORTHO05D007588 2.8e-06 56.6 97 45.4
Thhalv10015519m.g Eutrema salsugineum HOM05D000984 ORTHO05D001096 3.6e-06 56.2 82 35.4


User provided reference genes

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