Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv31528 Davidia involucrata HOM05D007678 ORTHO05D009658 9.6e-142 506.9 274 100.0
Actinidia01693 Actinidia chinensis HOM05D007678 ORTHO05D009658 2.0e-94 349.7 266 71.1
TAR623G0324 Trochodendron aralioides HOM05D007678 ORTHO05D009658 1.2e-88 330.5 230 76.5
Atru.chr2.1713_Atru.chr2.1714 Acer truncatum HOM05D007678 ORTHO05D009658 2.3e-87 326.2 233 74.7
MD02G1272300 Malus domestica HOM05D007678 ORTHO05D009658 1.3e-85 320.5 216 76.9
Prupe.2G048500 Prunus persica HOM05D007678 ORTHO05D009658 1.3e-85 320.5 224 75.4
Nn7g37012 Nelumbo nucifera HOM05D007678 ORTHO05D009658 3.2e-84 315.8 229 71.6
Duzib106G1843 Durio zibethinus HOM05D007678 ORTHO05D009658 1.6e-83 313.5 262 66.4
Potri.001G033500 Populus trichocarpa HOM05D007678 ORTHO05D009658 3.5e-83 312.4 225 75.1
QL04p021923 Quercus lobata HOM05D007678 ORTHO05D009658 2.3e-82 309.7 223 73.5
Sed0019894 Sechium edule HOM05D000001 ORTHO05D000003 4.3e-81 305.4 231 69.3
Haze_02966 Corylus avellana HOM05D007678 ORTHO05D009658 2.1e-80 303.1 240 68.3
Thecc.10G137600 Theobroma cacao HOM05D007678 ORTHO05D009658 2.3e-79 299.7 233 68.2
FvH4_7g04260 Fragaria vesca HOM05D007678 ORTHO05D009658 3.1e-79 299.3 226 70.4
FAN10G0661 Fragaria x ananassa HOM05D007678 ORTHO05D009658 5.2e-79 298.5 231 68.8
Psat3g196520 Pisum sativum HOM05D007678 ORTHO05D009658 5.2e-79 298.5 222 69.8
RcHm_v2.0_Chr1g0328821 Rosa chinensis HOM05D007678 ORTHO05D009658 5.2e-79 298.5 226 69.5
TWI38G1059 Tripterygium wilfordii HOM05D007678 ORTHO05D009658 5.2e-79 298.5 263 63.5
Lj1g0010481 Lotus japonicus HOM05D007678 ORTHO05D009658 8.9e-79 297.7 214 72.0
PGSC0003DMG401028118 Solanum tuberosum HOM05D007678 ORTHO05D009658 8.9e-79 297.7 236 68.2
Solyc10g081280.2 Solanum lycopersicum HOM05D007678 ORTHO05D009658 3.4e-78 295.8 212 73.1
Ca_04109_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 4.4e-78 295.4 213 72.8
Ca_04118_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 4.4e-78 295.4 213 72.8
Sopen10g031780 Solanum pennellii HOM05D007678 ORTHO05D009658 1.3e-77 293.9 212 71.7
Medtr7g009670 Medicago truncatula HOM05D007678 ORTHO05D009658 2.9e-77 292.7 223 70.4
MELO3C034052.2 Cucumis melo HOM05D007678 ORTHO05D009658 1.1e-76 290.8 233 67.0
Gorai.011G222500 Gossypium raimondii HOM05D007678 ORTHO05D009658 3.2e-76 289.3 213 70.4
MBI13_g30074_MAGBIO Magnolia biondii HOM05D007678 ORTHO05D009658 4.1e-76 288.9 227 68.7
Gohir.D10G198600 Gossypium hirsutum HOM05D007678 ORTHO05D009658 1.2e-75 287.3 213 70.0
Lalb_Chr17g0337231 Lupinus albus HOM05D007678 ORTHO05D009658 1.6e-75 287.0 216 68.5
HanXRQChr12g0376111 Helianthus annuus HOM05D007678 ORTHO05D009658 2.0e-75 286.6 227 67.4
Oeu044217.3 Olea europaea HOM05D007678 ORTHO05D009658 1.3e-74 283.9 249 62.2
Glyma.09G240200 Glycine max HOM05D007678 ORTHO05D009658 5.0e-74 282.0 255 62.7
ATR0307G037 Amborella trichopoda HOM05D007678 ORTHO05D009658 8.6e-74 281.2 225 65.8
ECA248G0545 Erigeron canadensis HOM05D007678 ORTHO05D009658 8.6e-74 281.2 215 67.4
vmacro20847 Vaccinium macrocarpon HOM05D007678 ORTHO05D009658 3.3e-73 279.3 250 64.8
DCAR_001914 Daucus carota HOM05D007678 ORTHO05D009658 7.3e-73 278.1 214 70.1
Sabra01G0023800 Salix brachista HOM05D007678 ORTHO05D009658 1.2e-72 277.3 273 60.1
SalBow6G2419 Salvia bowleyana HOM05D007678 ORTHO05D009658 4.7e-72 275.4 216 64.8
COL.COLO4_04659 Corchorus olitorius HOM05D007678 ORTHO05D009658 8.1e-72 274.6 237 64.1
Manes.04G155050 Manihot esculenta HOM05D007678 ORTHO05D009658 4.0e-71 272.3 264 59.8
Sc10g0003150 Simmondsia chinensis HOM05D007678 ORTHO05D009658 5.2e-71 271.9 224 66.1
Ah.12g064780 Amaranthus hybridus HOM05D007678 ORTHO05D009658 8.9e-71 271.2 230 61.7
Migut.J01589 Erythranthe guttata HOM05D007678 ORTHO05D009658 8.9e-71 271.2 232 61.6
Lsat_1_v5_gn_7_114920 Lactuca sativa HOM05D007678 ORTHO05D009658 8.9e-71 271.2 223 66.4
Peaxi162Scf00153g00057 Petunia axillaris HOM05D007678 ORTHO05D009658 4.4e-70 268.9 195 71.8
QL04p022035 Quercus lobata HOM05D007678 ORTHO05D009658 9.9e-70 267.7 190 72.6
PGR031G1114 Punica granatum HOM05D007678 ORTHO05D009658 2.9e-69 266.2 270 57.4
Eucgr.G03196 Eucalyptus grandis HOM05D007678 ORTHO05D009658 6.4e-69 265.0 219 64.8
Gohir.A10G190900 Gossypium hirsutum HOM05D007678 ORTHO05D009658 4.1e-68 262.3 196 69.4
CAN.G128.118 Capsicum annuum HOM05D001269 ORTHO05D001083 6.0e-67 258.5 190 71.6
FAN06G1516 Fragaria x ananassa HOM05D007678 ORTHO05D009658 3.9e-66 255.8 260 58.5
arahy.Tifrunner.gnm1.ann1.EB95VJ Arachis hypogaea HOM05D007678 ORTHO05D009658 7.3e-65 251.5 236 60.6
Hund13420 Selenicereus undatus HOM05D007678 ORTHO05D009658 1.2e-64 250.8 274 54.4
Nitab4.5_0008005g0010 Nicotiana tabacum HOM05D007678 ORTHO05D009658 8.1e-64 248.1 183 70.5
EL10Ac2g02701 Beta vulgaris HOM05D007678 ORTHO05D009658 8.9e-63 244.6 268 54.5
Nitab4.5_0000062g0570 Nicotiana tabacum HOM05D007678 ORTHO05D009658 1.5e-62 243.8 193 66.8
CsaV3_5G029470 Cucumis sativus L. HOM05D007678 ORTHO05D000003 4.9e-61 238.8 185 70.3
HPP92_018248 Vanilla planifolia HOM05D007678 ORTHO05D009658 6.4e-61 238.4 206 58.7
unitig_37.g12769 Utricularia gibba HOM05D007678 ORTHO05D009658 1.9e-60 236.9 214 57.9
Rhsim01G0121700 Rhododendron simsii HOM05D007678 ORTHO05D009658 1.7e-58 230.3 150 78.0
CDE09G0612 Ceratophyllum demersum HOM05D007678 ORTHO05D009658 3.0e-58 229.6 189 66.7
Zm00001eb303400 Zea mays HOM05D007678 ORTHO05D009658 3.0e-58 229.6 213 58.7
CiPaw.14G011000 Carya illinoinensis HOM05D007678 ORTHO05D009658 1.9e-57 226.9 189 65.1
AUR62031676 Chenopodium quinoa HOM05D007678 ORTHO05D009658 1.2e-54 217.6 172 63.4
Glyma.18G256300 Glycine max HOM05D007678 ORTHO05D009658 1.9e-52 210.3 216 57.9
VMungo1383G0210 Vigna mungo HOM05D000430 ORTHO05D009658 3.2e-52 209.5 154 71.4
CBR_g30334 Chara braunii HOM05D007678 ORTHO05D009658 8.4e-45 184.9 211 44.5
Pp3c18_7980 Physcomitrium patens HOM05D007678 ORTHO05D009658 3.2e-44 183.0 206 42.2
Cc06_g20600 Coffea canephora HOM05D007678 ORTHO05D009658 9.3e-44 181.4 148 64.9
Mapoly0003s0067 Marchantia polymorpha HOM05D007678 ORTHO05D009658 1.6e-43 180.6 207 42.5
TPR.G4277 Trifolium pratense HOM05D007678 ORTHO05D009658 2.8e-40 169.9 127 70.9
SMO174G0167 Selaginella moellendorffii HOM05D007678 ORTHO05D009658 8.1e-40 168.3 195 44.6
arahy.Tifrunner.gnm1.ann1.L3S1G4 Arachis hypogaea HOM05D007678 ORTHO05D009658 1.1e-39 167.9 212 49.1
CANSAT56G0191 Cannabis sativa HOM05D007678 ORTHO05D009658 2.4e-39 166.8 132 65.2
QL04p021970 Quercus lobata HOM05D007678 ORTHO05D009658 2.0e-38 163.7 108 76.9
Phvul.008G043200 Phaseolus vulgaris HOM05D007678 ORTHO05D009658 5.8e-38 162.2 126 67.5
Cpa.g.sc33.162 Carica papaya HOM05D007678 ORTHO05D009658 2.7e-35 153.3 99 80.8
Lsat_1_v5_gn_5_155661 Lactuca sativa HOM05D007678 ORTHO05D009658 6.0e-35 152.1 205 46.3
TPR.G8973 Trifolium pratense HOM05D007678 ORTHO05D009658 1.2e-30 137.9 98 70.4
Cc06_g20610 Coffea canephora HOM05D007678 ORTHO05D009658 5.5e-28 129.0 85 74.1
arahy.Tifrunner.gnm1.ann1.1DGF2A Arachis hypogaea HOM05D007678 ORTHO05D009658 1.3e-26 124.4 94 64.9
PRCOL_00006709 Prasinoderma coloniale HOM05D007678 ORTHO05D009658 7.6e-22 108.6 200 30.5
GSVIVG01012452001 Vitis vinifera HOM05D007678 ORTHO05D009658 2.9e-21 106.7 79 68.4
CSS0047660 Camellia sinensis var. sinensis HOM05D007678 ORTHO05D009658 2.5e-20 103.6 60 83.3
arahy.Tifrunner.gnm1.ann1.6E2HM0 Arachis hypogaea HOM05D007678 ORTHO05D009658 1.4e-18 97.8 78 61.5
MCO01G505 Micromonas commoda HOM05D007678 ORTHO05D009658 2.8e-16 90.1 186 26.9
arahy.Tifrunner.gnm1.ann1.78M82M Arachis hypogaea HOM05D007678 ORTHO05D009658 3.8e-13 79.7 64 65.6
QL04p021975 Quercus lobata HOM05D007678 ORTHO05D009658 8.5e-13 78.6 59 67.8
QL02p047964 Quercus lobata HOM05D007678 ORTHO05D009658 7.9e-11 72.0 64 64.1
arahy.Tifrunner.gnm1.ann1.NH3ZAS Arachis hypogaea HOM05D007678 ORTHO05D009658 1.4e-10 71.2 65 61.5
Os07g0222900 Oryza sativa ssp. japonica HOM05D007678 ORTHO05D009658 3.9e-10 69.7 69 53.6
FAN03G1326 Fragaria x ananassa HOM05D001392 ORTHO05D006407 5.1e-10 69.3 59 66.1
arahy.Tifrunner.gnm1.ann1.Q44M57 Arachis hypogaea HOM05D006052 ORTHO05D007319 6.3e-08 62.4 46 65.2
QL02p047905 Quercus lobata HOM05D007678 ORTHO05D009658 1.1e-07 61.6 62 53.2
MBI17_g22149_MAGBIO Magnolia biondii HOM05D000068 ORTHO05D000084 2.0e-06 57.4 59 47.5
HanXRQChr11g0352371 Helianthus annuus HOM05D007678 ORTHO05D009658 4.5e-06 56.2 54 53.7
arahy.Tifrunner.gnm1.ann1.MMNX5U Arachis hypogaea HOM05D000747 ORTHO05D009658 5.9e-06 55.8 60 55.0
arahy.Tifrunner.gnm1.ann1.BX3238 Arachis hypogaea HOM05D007678 ORTHO05D009658 7.7e-06 55.5 84 42.9


User provided reference genes

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