Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv31500 Davidia involucrata HOM05D007209 ORTHO05D000921 2.4e-84 315.5 158 100.0
Dinv02799 Davidia involucrata HOM05D000665 ORTHO05D000921 6.3e-61 237.7 142 86.6
Dinv43770 Davidia involucrata HOM05D000665 ORTHO05D000921 7.0e-60 234.2 161 77.6
Dinv03607 Davidia involucrata HOM05D000665 ORTHO05D000921 2.0e-59 232.6 140 87.1
Dinv17018 Davidia involucrata HOM05D007209 ORTHO05D000921 2.0e-59 232.6 142 84.5
Dinv42966 Davidia involucrata HOM05D007209 ORTHO05D000921 2.0e-59 232.6 142 84.5
Dinv43133 Davidia involucrata HOM05D007209 ORTHO05D000921 2.0e-59 232.6 142 84.5
Dinv29901 Davidia involucrata HOM05D007209 ORTHO05D000921 3.0e-55 218.8 137 84.7
Dinv39109 Davidia involucrata HOM05D000665 ORTHO05D000921 2.4e-52 209.1 125 85.6
Dinv44163 Davidia involucrata HOM05D007209 ORTHO05D000921 2.9e-50 202.2 124 83.9
Dinv11893 Davidia involucrata HOM05D007209 ORTHO05D000921 1.3e-42 176.8 108 87.0
Dinv11546 Davidia involucrata HOM05D007209 ORTHO05D000921 2.6e-38 162.5 93 89.2
Dinv42302 Davidia involucrata HOM05D007209 ORTHO05D000921 3.4e-38 162.2 93 90.3
Dinv07014 Davidia involucrata HOM05D000665 ORTHO05D000921 7.7e-35 151.0 108 68.5
Dinv07047 Davidia involucrata HOM05D000003 ORTHO05D000007 1.8e-31 139.8 92 81.5
Dinv22995 Davidia involucrata HOM05D007209 ORTHO05D000921 8.9e-31 137.5 135 60.0
Dinv15874 Davidia involucrata HOM05D000665 ORTHO05D000921 1.8e-28 129.8 138 54.3
Dinv36419 Davidia involucrata HOM05D007209 ORTHO05D000921 2.0e-27 126.3 93 76.3
Nn3g16139 Nelumbo nucifera HOM05D000665 ORTHO05D000285 5.8e-22 108.2 151 47.0
Nn3g20404 Nelumbo nucifera HOM05D000665 ORTHO05D000285 5.8e-22 108.2 151 47.0
Nn1g02527 Nelumbo nucifera HOM05D000665 ORTHO05D000921 6.6e-18 94.7 152 41.4
TAR419G0001 Trochodendron aralioides HOM05D019442 ORTHO05D000921 3.3e-17 92.4 111 48.6
Dinv16127 Davidia involucrata HOM05D007209 ORTHO05D000921 1.4e-15 87.0 43 93.0
MELO3C030897.2 Cucumis melo HOM05D007209 ORTHO05D000921 2.3e-15 86.3 92 47.8
Dinv33374 Davidia involucrata HOM05D008473 ORTHO05D000921 5.8e-14 81.6 95 48.4
MELO3C032092.2 Cucumis melo HOM05D007209 ORTHO05D000921 7.5e-14 81.3 108 42.6
Dinv32776 Davidia involucrata HOM05D007209 ORTHO05D000921 7.5e-14 81.3 144 40.3
Dinv20825 Davidia involucrata HOM05D007209 ORTHO05D000921 2.2e-13 79.7 144 39.6
MELO3C035039.2 Cucumis melo HOM05D007209 ORTHO05D000921 2.9e-13 79.3 108 42.6
MBI04_g27247_MAGBIO Magnolia biondii HOM05D000665 ORTHO05D000285 2.9e-13 79.3 92 44.6
TAR629G1791 Trochodendron aralioides HOM05D000665 ORTHO05D000921 8.3e-13 77.8 140 40.0
Dinv03187 Davidia involucrata HOM05D007209 ORTHO05D000921 1.1e-12 77.4 52 76.9
Hma1.2p1_0805F.1_g221293 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 1.9e-12 76.6 144 37.5
Hma1.2p1_0805F.1_g221299 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 1.9e-12 76.6 144 37.5
QL01p020889 Quercus lobata HOM05D000665 ORTHO05D000921 3.2e-12 75.9 161 37.9
CSS0008427 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 5.4e-12 75.1 153 35.3
CSS0028686 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 9.2e-12 74.3 153 35.3
COL.COLO4_20107 Corchorus olitorius HOM05D007209 ORTHO05D000921 9.2e-12 74.3 96 45.8
CANSAT54G0727 Cannabis sativa HOM05D007209 ORTHO05D000921 1.6e-11 73.6 108 41.7
CSS0041063 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 2.1e-11 73.2 108 41.7
ClCG10G015090 Citrullus lanatus HOM05D007209 ORTHO05D000921 2.1e-11 73.2 100 42.0
CANSAT80G2513 Cannabis sativa HOM05D000034 ORTHO05D000037 2.7e-11 72.8 107 41.1
MELO3C031338.2 Cucumis melo HOM05D007209 ORTHO05D000921 3.5e-11 72.4 90 42.2
MELO3C034280.2 Cucumis melo HOM05D007209 ORTHO05D000921 3.5e-11 72.4 96 41.7
MELO3C032294.2 Cucumis melo HOM05D007209 ORTHO05D000921 4.6e-11 72.0 110 42.7
TAR597G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 4.6e-11 72.0 95 44.2
ClCG03G011480 Citrullus lanatus HOM05D007209 ORTHO05D000921 7.8e-11 71.2 151 35.1
MELO3C035563.2 Cucumis melo HOM05D007209 ORTHO05D000921 7.8e-11 71.2 107 39.3
TAR080G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 7.8e-11 71.2 141 41.1
CsaV3_3G041440 Cucumis sativus L. HOM05D007209 ORTHO05D000921 2.3e-10 69.7 120 40.0
Hma1.2p1_0309F.1_g120595 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 2.3e-10 69.7 144 37.5
CSS0048883 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 3.0e-10 69.3 96 43.8
PSO782G4265 Papaver somniferum HOM05D000876 ORTHO05D000285 3.0e-10 69.3 103 42.7
TAR599G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 3.0e-10 69.3 93 44.1
CSS0000387 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 3.9e-10 68.9 149 34.9
CANSAT54G0360 Cannabis sativa HOM05D000665 ORTHO05D000921 3.9e-10 68.9 97 41.2
PSO063G5726 Papaver somniferum HOM05D000876 ORTHO05D000285 3.9e-10 68.9 103 42.7
MELO3C033912.2 Cucumis melo HOM05D007209 ORTHO05D000921 5.1e-10 68.6 79 43.0
CSS0004715 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 6.6e-10 68.2 149 34.9
MELO3C029808.2 Cucumis melo HOM05D007209 ORTHO05D000921 6.6e-10 68.2 85 45.9
HanXRQChr13g0396681 Helianthus annuus HOM05D000665 ORTHO05D000921 6.6e-10 68.2 102 41.2
Hma1.2p1_1786F.1_g302300 Hydrangea macrophylla HOM05D000665 ORTHO05D000921 6.6e-10 68.2 145 37.2
CANSAT35G1351 Cannabis sativa HOM05D000665 ORTHO05D000921 8.6e-10 67.8 95 41.1
COL.COLO4_25265 Corchorus olitorius HOM05D007209 ORTHO05D000921 8.6e-10 67.8 145 35.9
MELO3C009866.2 Cucumis melo HOM05D007209 ORTHO05D000921 8.6e-10 67.8 147 32.7
Nn8g39982 Nelumbo nucifera HOM05D013718 ORTHO05D000285 8.6e-10 67.8 135 35.6
CSS0009073 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.1e-09 67.4 95 43.2
LjContig00141g0014815 Lotus japonicus HOM05D007209 ORTHO05D000921 1.1e-09 67.4 88 39.8
Hma1.2p1_2380F.1_g320966 Hydrangea macrophylla HOM05D000665 ORTHO05D000921 1.5e-09 67.0 145 36.6
EL10Ac6g14409 Beta vulgaris HOM05D007209 ORTHO05D000921 1.9e-09 66.6 91 40.7
CANSAT01G1895 Cannabis sativa HOM05D003171 ORTHO05D000921 1.9e-09 66.6 112 37.5
CANSAT25G2398 Cannabis sativa HOM05D000665 ORTHO05D000921 1.9e-09 66.6 112 37.5
CANSAT25G0660 Cannabis sativa HOM05D000665 ORTHO05D000921 2.5e-09 66.2 154 35.1
CANSAT80G1832 Cannabis sativa HOM05D000034 ORTHO05D000921 2.5e-09 66.2 97 40.2
Dinv29345 Davidia involucrata HOM05D000665 ORTHO05D000921 2.5e-09 66.2 142 35.9
Dinv12345 Davidia involucrata HOM05D007209 ORTHO05D000921 3.3e-09 65.9 42 81.0
AUR62040593 Chenopodium quinoa HOM05D007209 ORTHO05D000921 4.3e-09 65.5 89 41.6
Lj2g0013227 Lotus japonicus HOM05D007209 ORTHO05D000921 5.6e-09 65.1 88 39.8
Dinv18314 Davidia involucrata HOM05D007209 ORTHO05D000921 7.3e-09 64.7 36 94.4
PSO170G3394 Papaver somniferum HOM05D003171 ORTHO05D000921 7.3e-09 64.7 87 42.5
PSO700G0266 Papaver somniferum HOM05D003171 ORTHO05D000921 7.3e-09 64.7 87 42.5
GSVIVG01038689001 Vitis vinifera HOM05D000665 ORTHO05D000921 7.3e-09 64.7 147 34.0
Actinidia03712 Actinidia chinensis HOM05D000665 ORTHO05D000921 9.5e-09 64.3 149 34.2
arahy.Tifrunner.gnm1.ann1.2911W9 Arachis hypogaea HOM05D000876 ORTHO05D000285 9.5e-09 64.3 91 36.3
CSS0029683 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 9.5e-09 64.3 149 34.2
Lj1g0024899 Lotus japonicus HOM05D000665 ORTHO05D000921 9.5e-09 64.3 88 39.8
CSS0047450 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.2e-08 63.9 149 34.2
MELO3C032620.2 Cucumis melo HOM05D007209 ORTHO05D000285 1.2e-08 63.9 128 34.4
Rhsim03G0151700 Rhododendron simsii HOM05D000114 ORTHO05D000037 1.2e-08 63.9 94 40.4
MELO3C028998.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.6e-08 63.5 134 35.8
CSS0041232 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 2.1e-08 63.2 97 39.2
CANSAT01G1528 Cannabis sativa HOM05D000665 ORTHO05D000921 2.8e-08 62.8 112 35.7
Nn3g21369 Nelumbo nucifera HOM05D013718 ORTHO05D000921 2.8e-08 62.8 111 35.1
Prupe.7G061200 Prunus persica HOM05D003171 ORTHO05D000921 2.8e-08 62.8 95 42.1
MELO3C030185.2 Cucumis melo HOM05D007209 ORTHO05D000921 3.6e-08 62.4 96 34.4
arahy.Tifrunner.gnm1.ann1.PEG6DJ Arachis hypogaea HOM05D000034 ORTHO05D000037 4.7e-08 62.0 91 35.2
arahy.Tifrunner.gnm1.ann1.R6BV2D Arachis hypogaea HOM05D000876 ORTHO05D000285 4.7e-08 62.0 91 35.2
MELO3C032195.2 Cucumis melo HOM05D007209 ORTHO05D000921 4.7e-08 62.0 93 36.6
Lj3A995G65 Lonicera japonica HOM05D008338 ORTHO05D000921 4.7e-08 62.0 96 40.6
Rhsim12G0067000 Rhododendron simsii HOM05D000034 ORTHO05D000037 4.7e-08 62.0 130 35.4
RcHm_v2.0_Chr1g0354771 Rosa chinensis HOM05D003171 ORTHO05D000921 4.7e-08 62.0 115 40.0
CANSAT01G0669 Cannabis sativa HOM05D000665 ORTHO05D000921 6.2e-08 61.6 112 33.9
PSO541G2915 Papaver somniferum HOM05D000876 ORTHO05D000285 8.1e-08 61.2 141 32.6
QL06p033820 Quercus lobata HOM05D003171 ORTHO05D000921 8.1e-08 61.2 146 32.9
TWI09G1246 Tripterygium wilfordii HOM05D000665 ORTHO05D000921 8.1e-08 61.2 112 38.4
CANSAT64G2197 Cannabis sativa HOM05D003171 ORTHO05D000921 1.4e-07 60.5 158 31.6
Prupe.8G117400 Prunus persica HOM05D003171 ORTHO05D000921 1.4e-07 60.5 97 39.2
Aqoxy6G02328 Aquilegia oxysepala HOM05D000665 ORTHO05D000921 1.8e-07 60.1 77 41.6
CiPaw.10G092200 Carya illinoinensis HOM05D003171 ORTHO05D000921 1.8e-07 60.1 92 41.3
Aqoxy1G02964 Aquilegia oxysepala HOM05D007209 ORTHO05D000285 2.3e-07 59.7 135 34.1
vmacro05171 Vaccinium macrocarpon HOM05D004340 ORTHO05D006363 2.3e-07 59.7 113 38.9
arahy.Tifrunner.gnm1.ann1.X5RLQI Arachis hypogaea HOM05D000034 ORTHO05D000285 3.1e-07 59.3 91 34.1
Dinv05111 Davidia involucrata HOM05D008473 ORTHO05D000921 3.1e-07 59.3 88 42.0
arahy.Tifrunner.gnm1.ann1.GG5U8X Arachis hypogaea HOM05D000876 ORTHO05D000285 4.0e-07 58.9 93 34.4
PSO170G2007 Papaver somniferum HOM05D000665 ORTHO05D003147 4.0e-07 58.9 141 32.6
PSO541G5373 Papaver somniferum HOM05D000665 ORTHO05D003147 4.0e-07 58.9 92 35.9
PSO063G1533 Papaver somniferum HOM05D007209 ORTHO05D000285 5.2e-07 58.5 143 34.3
Rhsim07G0029700 Rhododendron simsii HOM05D020286 ORTHO05D000921 5.2e-07 58.5 97 37.1
Atru.chr5.3274 Acer truncatum HOM05D003171 ORTHO05D000921 8.9e-07 57.8 87 39.1
arahy.Tifrunner.gnm1.ann1.AG0B9Q Arachis hypogaea HOM05D000034 ORTHO05D000285 8.9e-07 57.8 91 33.0
arahy.Tifrunner.gnm1.ann1.Z2QP4M Arachis hypogaea HOM05D000034 ORTHO05D000037 8.9e-07 57.8 91 33.0
Cc01_g10760 Coffea canephora HOM05D000665 ORTHO05D000921 8.9e-07 57.8 124 34.7
PSO541G6499 Papaver somniferum HOM05D000665 ORTHO05D003147 8.9e-07 57.8 141 32.6
PSO716G0001 Papaver somniferum HOM05D000665 ORTHO05D003147 8.9e-07 57.8 141 32.6
PSO732G0102 Papaver somniferum HOM05D000034 ORTHO05D000037 8.9e-07 57.8 84 40.5
TWI38G2389 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 8.9e-07 57.8 134 33.6
MELO3C030265.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.2e-06 57.4 70 41.4
PSO339G0519 Papaver somniferum HOM05D007209 ORTHO05D000921 1.2e-06 57.4 90 42.2
QL09p025174 Quercus lobata HOM05D003171 ORTHO05D000921 1.2e-06 57.4 146 32.2
PSO170G0901 Papaver somniferum HOM05D000665 ORTHO05D003147 1.5e-06 57.0 141 32.6
PSO724G0339 Papaver somniferum HOM05D003171 ORTHO05D000921 1.5e-06 57.0 142 34.5
QL05p040133 Quercus lobata HOM05D003171 ORTHO05D000921 1.5e-06 57.0 146 32.2
QL05p062248 Quercus lobata HOM05D003171 ORTHO05D000921 1.5e-06 57.0 146 32.2
COL.COLO4_15155 Corchorus olitorius HOM05D003171 ORTHO05D000921 2.0e-06 56.6 135 35.6
arahy.Tifrunner.gnm1.ann1.L4SQ9F Arachis hypogaea HOM05D000034 ORTHO05D000037 2.6e-06 56.2 91 33.0
CSS0044845 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.6e-06 56.2 144 33.3
Lj7A726T26 Lonicera japonica HOM05D008338 ORTHO05D000921 2.6e-06 56.2 95 37.9
Lj1g0016199 Lotus japonicus HOM05D007209 ORTHO05D000921 2.6e-06 56.2 164 28.7
QL07p023043 Quercus lobata HOM05D003171 ORTHO05D000921 2.6e-06 56.2 93 37.6
Ciclev10006620m.g Citrus clementina HOM05D003171 ORTHO05D000921 3.4e-06 55.8 152 31.6
COL.COLO4_33426 Corchorus olitorius HOM05D007209 ORTHO05D000921 3.4e-06 55.8 95 36.8
CSS0007077 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 4.4e-06 55.5 41 65.9
Cfa019984 Carpinus fangiana HOM05D015741 ORTHO05D020359 4.4e-06 55.5 87 36.8
AUR62037953 Chenopodium quinoa HOM05D007209 ORTHO05D000921 4.4e-06 55.5 78 39.7
MELO3C034962.2 Cucumis melo HOM05D007209 ORTHO05D000921 4.4e-06 55.5 61 49.2
FvH4_7g00340 Fragaria vesca HOM05D003171 ORTHO05D000921 4.4e-06 55.5 83 41.0
Lj7A99T40 Lonicera japonica HOM05D008338 ORTHO05D000921 4.4e-06 55.5 93 37.6
PSO541G6026 Papaver somniferum HOM05D000665 ORTHO05D000140 4.4e-06 55.5 83 37.3
arahy.Tifrunner.gnm1.ann1.7Y6611 Arachis hypogaea HOM05D000034 ORTHO05D000037 5.8e-06 55.1 91 34.1
CSS0010680 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 5.8e-06 55.1 144 30.6
CiPaw.08G101500 Carya illinoinensis HOM05D003171 ORTHO05D000921 5.8e-06 55.1 105 38.1
COL.COLO4_05628 Corchorus olitorius HOM05D007209 ORTHO05D000921 5.8e-06 55.1 87 36.8
Lj4A464T6 Lonicera japonica HOM05D008338 ORTHO05D000921 5.8e-06 55.1 96 38.5
PSO541G6339 Papaver somniferum HOM05D000665 ORTHO05D000140 5.8e-06 55.1 66 37.9
Sed0016419 Sechium edule HOM05D007209 ORTHO05D000921 5.8e-06 55.1 72 40.3
TAR626G0805 Trochodendron aralioides HOM05D000665 ORTHO05D000285 5.8e-06 55.1 108 33.3
CANSAT21G1611 Cannabis sativa HOM05D007209 ORTHO05D000921 7.6e-06 54.7 113 33.6
CiPaw.01G106700 Carya illinoinensis HOM05D003171 ORTHO05D000921 7.6e-06 54.7 139 32.4
MELO3C030714.2 Cucumis melo HOM05D007209 ORTHO05D000921 7.6e-06 54.7 45 55.6
PSO017G2722 Papaver somniferum HOM05D007209 ORTHO05D000285 7.6e-06 54.7 90 41.1
QL02p070399 Quercus lobata HOM05D003171 ORTHO05D000921 7.6e-06 54.7 146 31.5
QL03p032583 Quercus lobata HOM05D000034 ORTHO05D000921 7.6e-06 54.7 93 37.6
QL04p024672 Quercus lobata HOM05D000034 ORTHO05D000921 7.6e-06 54.7 93 37.6
QL09p032434 Quercus lobata HOM05D003171 ORTHO05D000921 7.6e-06 54.7 146 31.5
QL10p053818 Quercus lobata HOM05D003171 ORTHO05D000921 7.6e-06 54.7 146 31.5
MELO3C034270.2 Cucumis melo HOM05D007209 ORTHO05D000921 9.9e-06 54.3 61 49.2
PSO384G2875 Papaver somniferum HOM05D000665 ORTHO05D003147 9.9e-06 54.3 142 30.3


User provided reference genes

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