Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv31495 Davidia involucrata HOM05D004603 ORTHO05D005244 1.7e-54 215.7 106 100.0
Dinv32050 Davidia involucrata HOM05D004603 ORTHO05D005244 1.9e-24 115.9 73 78.1
DCAR_031824 Daucus carota HOM05D004603 ORTHO05D005244 7.3e-13 77.4 73 54.8
GSVIVG01022405001 Vitis vinifera HOM05D004603 ORTHO05D005244 7.3e-13 77.4 76 61.8
Lj9A646T46 Lonicera japonica HOM05D004603 ORTHO05D005244 9.5e-13 77.0 85 54.1
QL04p013733 Quercus lobata HOM05D004603 ORTHO05D005244 8.1e-12 73.9 75 58.7
COL.COLO4_25832 Corchorus olitorius HOM05D004603 ORTHO05D005244 1.5e-10 69.7 73 54.8
Cfa010862 Carpinus fangiana HOM05D004603 ORTHO05D005244 2.6e-10 68.9 73 54.8
Haze_03089 Corylus avellana HOM05D004603 ORTHO05D005244 2.6e-10 68.9 73 54.8
Eucgr.G03257 Eucalyptus grandis HOM05D004603 ORTHO05D005244 2.6e-10 68.9 73 52.1
DCAR_009134 Daucus carota HOM05D004603 ORTHO05D005244 4.4e-10 68.2 73 47.9
TAR053G0004 Trochodendron aralioides HOM05D004603 ORTHO05D005244 5.8e-10 67.8 77 54.5
PGR031G2747 Punica granatum HOM05D004603 ORTHO05D005244 9.9e-10 67.0 73 53.4
Duzib128G1390 Durio zibethinus HOM05D004603 ORTHO05D005244 2.9e-09 65.5 73 52.1
Manes.11G002700 Manihot esculenta HOM05D004603 ORTHO05D005244 2.9e-09 65.5 73 54.8
Ciclev10032728m.g Citrus clementina HOM05D004603 ORTHO05D005244 3.8e-09 65.1 74 54.1
Duzib114G1022 Durio zibethinus HOM05D004603 ORTHO05D005244 3.8e-09 65.1 73 53.4
RcHm_v2.0_Chr7g0218601 Rosa chinensis HOM05D004603 ORTHO05D005244 3.8e-09 65.1 73 50.7
Sed0010230 Sechium edule HOM05D004603 ORTHO05D005244 3.8e-09 65.1 73 49.3
RcHm_v2.0_Chr1g0319701 Rosa chinensis HOM05D004603 ORTHO05D005244 1.1e-08 63.5 73 49.3
CiPaw.14G006000 Carya illinoinensis HOM05D004603 ORTHO05D005244 1.9e-08 62.8 73 52.1
Actinidia30721 Actinidia chinensis HOM05D004603 ORTHO05D005244 3.2e-08 62.0 73 50.7
COL.COLO4_29439 Corchorus olitorius HOM05D004603 ORTHO05D005244 4.1e-08 61.6 73 49.3
Thecc.10G006000 Theobroma cacao HOM05D004603 ORTHO05D005244 4.1e-08 61.6 73 52.1
TAR369G0595 Trochodendron aralioides HOM05D004603 ORTHO05D005244 4.1e-08 61.6 75 49.3
Gohir.D04G071400 Gossypium hirsutum HOM05D004603 ORTHO05D005244 1.2e-07 60.1 73 47.9
Gorai.012G080400 Gossypium raimondii HOM05D004603 ORTHO05D005244 1.2e-07 60.1 73 47.9
Cpa.g.sc197.6 Carica papaya HOM05D004603 ORTHO05D005244 1.6e-07 59.7 73 52.1
ClCG05G020790 Citrullus lanatus HOM05D004603 ORTHO05D005244 1.6e-07 59.7 73 45.2
MELO3C012448.2 Cucumis melo HOM05D004603 ORTHO05D005244 2.1e-07 59.3 73 45.2
CsaV3_5G036510 Cucumis sativus L. HOM05D004603 ORTHO05D005244 2.1e-07 59.3 73 45.2
Glyma.11G113600 Glycine max HOM05D004603 ORTHO05D005244 2.1e-07 59.3 73 47.9
CANSAT35G1099 Cannabis sativa HOM05D004603 ORTHO05D005244 2.7e-07 58.9 73 46.6
DCAR_024211 Daucus carota HOM05D004603 ORTHO05D005244 2.7e-07 58.9 73 45.2
CAN.G1571.2 Capsicum annuum HOM05D004603 ORTHO05D005244 4.6e-07 58.2 73 45.2
Sed0015753 Sechium edule HOM05D004603 ORTHO05D005244 4.6e-07 58.2 73 43.8
FAN06G0782 Fragaria x ananassa HOM05D000001 ORTHO05D009083 6.0e-07 57.8 73 45.2
FvH4_3g19550 Fragaria vesca HOM05D004603 ORTHO05D005244 1.0e-06 57.0 73 45.2
FAN11G0237 Fragaria x ananassa HOM05D004603 ORTHO05D005244 1.3e-06 56.6 76 46.1
Potri.003G201500 Populus trichocarpa HOM05D004603 ORTHO05D005244 1.3e-06 56.6 73 52.1
TWI63G1183 Tripterygium wilfordii HOM05D004603 ORTHO05D005244 1.3e-06 56.6 75 49.3
FAN03G3254 Fragaria x ananassa HOM05D004603 ORTHO05D005244 1.7e-06 56.2 76 44.7
Nn3g18490 Nelumbo nucifera HOM05D051960 ORTHO05D005244 2.3e-06 55.8 75 45.3
Potri.001G024000 Populus trichocarpa HOM05D004603 ORTHO05D005244 5.1e-06 54.7 73 47.9
ECA248G3322 Erigeron canadensis HOM05D004603 ORTHO05D005244 6.6e-06 54.3 75 46.7
Lj3g0020788 Lotus japonicus HOM05D004603 ORTHO05D005244 6.6e-06 54.3 69 43.5
Lalb_Chr19g0138841 Lupinus albus HOM05D004603 ORTHO05D005244 6.6e-06 54.3 72 45.8
Nitab4.5_0000316g0040 Nicotiana tabacum HOM05D004603 ORTHO05D005244 6.6e-06 54.3 73 41.1
Glyma.12G039500 Glycine max HOM05D004603 ORTHO05D005244 8.6e-06 53.9 73 46.6


User provided reference genes

Program Settings