Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv31492 Davidia involucrata HOM05D005646 ORTHO05D006828 3.1e-196 688.3 361 100.0
Dinv32048 Davidia involucrata HOM05D005646 ORTHO05D006828 5.0e-138 495.0 410 69.8
Hma1.2p1_0902F.1_g234850 Hydrangea macrophylla HOM05D005646 ORTHO05D006828 5.0e-114 415.2 406 60.1
TAR053G0001 Trochodendron aralioides HOM05D005646 ORTHO05D006828 3.5e-107 392.5 364 61.3
QL04p013757 Quercus lobata HOM05D005646 ORTHO05D006828 2.5e-105 386.3 350 60.9
GSVIVG01000839001 Vitis vinifera HOM05D005646 ORTHO05D006828 1.3e-101 374.0 357 61.3
CSS0034883 Camellia sinensis var. sinensis HOM05D005646 ORTHO05D006828 3.7e-101 372.5 413 54.2
Cc02_g29140 Coffea canephora HOM05D005646 ORTHO05D006828 7.8e-99 364.8 371 57.4
CSS0050243 Camellia sinensis var. sinensis HOM05D005646 ORTHO05D006828 9.5e-97 357.8 413 53.5
Haze_03084 Corylus avellana HOM05D005646 ORTHO05D006828 5.4e-92 342.0 354 56.2
CiPaw.13G011000 Carya illinoinensis HOM05D005646 ORTHO05D006828 1.2e-91 340.9 360 54.2
MSTRG.20533 Avicennia marina HOM05D005646 ORTHO05D006828 4.3e-89 332.4 423 50.1
Prupe.2G029800 Prunus persica HOM05D005646 ORTHO05D006828 7.3e-89 331.6 356 55.1
Atru.chr11.2464 Acer truncatum HOM05D005646 ORTHO05D006828 2.1e-88 330.1 351 54.7
Duzib128G0351 Durio zibethinus HOM05D005646 ORTHO05D006828 4.7e-88 328.9 347 53.3
Thecc.10G006200 Theobroma cacao HOM05D005646 ORTHO05D006828 8.1e-88 328.2 350 52.9
Nn7g36491 Nelumbo nucifera HOM05D005646 ORTHO05D006828 1.4e-87 327.4 479 44.7
Ah.10g030810 Amaranthus hybridus HOM05D005646 ORTHO05D006828 5.4e-84 315.5 442 44.8
Cpa.g.sc197.4 Carica papaya HOM05D005646 ORTHO05D006828 7.1e-84 315.1 354 52.0
Manes.11G002900 Manihot esculenta HOM05D005646 ORTHO05D006828 1.6e-83 313.9 363 51.2
Eucgr.J01194 Eucalyptus grandis HOM05D005646 ORTHO05D006828 4.6e-83 312.4 346 53.2
TWI63G1320 Tripterygium wilfordii HOM05D005646 ORTHO05D006828 6.0e-83 312.0 352 51.7
MBI19_g40603_MAGBIO Magnolia biondii HOM05D005646 ORTHO05D006828 1.0e-82 311.2 313 55.6
Atru.chr11.2492 Acer truncatum HOM05D005646 ORTHO05D006828 3.0e-82 309.7 382 49.7
Ca_20909_v3 Cicer arietinum L. HOM05D005646 ORTHO05D006828 3.0e-82 309.7 350 52.6
Sabra01G0018200 Salix brachista HOM05D005646 ORTHO05D000112 3.0e-82 309.7 351 54.1
VMungo1127G2196 Vigna mungo HOM05D005646 ORTHO05D006828 3.0e-82 309.7 352 51.1
MD02G1293900 Malus domestica HOM05D005646 ORTHO05D006828 5.1e-82 308.9 350 52.3
Sc17g0003830 Simmondsia chinensis HOM05D005646 ORTHO05D006828 8.7e-82 308.1 360 50.8
SalBow5G2332 Salvia bowleyana HOM05D005646 ORTHO05D006828 1.1e-81 307.8 398 46.5
Phvul.011G041800 Phaseolus vulgaris HOM05D005646 ORTHO05D006828 4.3e-81 305.8 337 51.9
ClCG01G007660 Citrullus lanatus HOM05D005646 ORTHO05D006828 1.3e-80 304.3 356 53.7
EL10Ac2g02850 Beta vulgaris HOM05D005646 ORTHO05D006828 6.2e-80 302.0 463 42.3
Potri.001G024200 Populus trichocarpa HOM05D005646 ORTHO05D006828 8.1e-80 301.6 350 52.6
Lj3g0019487 Lotus japonicus HOM05D005646 ORTHO05D006828 2.4e-79 300.1 355 49.3
Solyc01g068470.4 Solanum lycopersicum HOM05D005646 ORTHO05D006828 9.0e-79 298.1 338 52.7
Peaxi162Scf00309g00328 Petunia axillaris HOM05D005646 ORTHO05D006828 1.2e-78 297.7 361 51.8
CsaV3_5G024710 Cucumis sativus L. HOM05D005646 ORTHO05D006828 4.5e-78 295.8 359 51.5
PGR142G3067 Punica granatum HOM05D005646 ORTHO05D006828 4.5e-78 295.8 330 51.2
Hund13332 Selenicereus undatus HOM05D005646 ORTHO05D006828 5.8e-78 295.4 447 43.4
AUR62032557 Chenopodium quinoa HOM05D005646 ORTHO05D006828 7.6e-78 295.0 461 41.0
MELO3C005130.2 Cucumis melo HOM05D005646 ORTHO05D006828 1.3e-77 294.3 346 51.7
Psat7g183120 Pisum sativum HOM05D005646 ORTHO05D006828 1.7e-77 293.9 319 51.7
Sed0017230 Sechium edule HOM05D005646 ORTHO05D006828 2.2e-77 293.5 353 52.7
SGA_v2.0_scaffold249G44948 Striga asiatica HOM05D005646 ORTHO05D006828 2.2e-77 293.5 392 50.5
CAN.G1571.4 Capsicum annuum HOM05D005646 ORTHO05D006828 2.9e-77 293.1 339 51.3
Gorai.011G293500 Gossypium raimondii HOM05D005646 ORTHO05D006828 1.9e-76 290.4 348 50.3
Gohir.D10G253200 Gossypium hirsutum HOM05D005646 ORTHO05D006828 2.4e-76 290.0 348 50.3
CDE08G1053 Ceratophyllum demersum HOM05D005646 ORTHO05D006828 7.1e-76 288.5 367 48.5
Nitab4.5_0000316g0120 Nicotiana tabacum HOM05D005646 ORTHO05D006828 1.2e-75 287.7 319 51.4
TPR.G30507 Trifolium pratense HOM05D005646 ORTHO05D006828 2.7e-75 286.6 317 50.5
Sopen01g030430 Solanum pennellii HOM05D005646 ORTHO05D006828 4.6e-75 285.8 378 47.6
HanXRQChr16g0525351 Helianthus annuus HOM05D005646 ORTHO05D006828 6.0e-75 285.4 289 53.6
Lsat_1_v5_gn_4_30541 Lactuca sativa HOM05D005646 ORTHO05D006828 1.0e-74 284.6 320 50.9
Ciclev10031582m.g Citrus clementina HOM05D005646 ORTHO05D006828 1.3e-74 284.3 349 49.3
DCAR_022352 Daucus carota HOM05D005646 ORTHO05D006828 1.8e-74 283.9 396 46.0
Glyma.11G113800 Glycine max HOM05D005646 ORTHO05D006828 3.3e-73 279.6 352 47.7
ECA234G1046 Erigeron canadensis HOM05D005646 ORTHO05D006828 1.3e-72 277.7 298 49.7
Gohir.A10G241000 Gossypium hirsutum HOM05D005646 ORTHO05D006828 1.3e-72 277.7 318 50.0
Nitab4.5_0013777g0020 Nicotiana tabacum HOM05D005646 ORTHO05D006828 1.6e-72 277.3 333 49.5
CANSAT54G2531 Cannabis sativa HOM05D005646 ORTHO05D006828 2.1e-72 276.9 330 50.9
Migut.B01206 Erythranthe guttata HOM05D005646 ORTHO05D006828 2.1e-72 276.9 382 45.0
AUR62031673 Chenopodium quinoa HOM05D005646 ORTHO05D006828 8.1e-72 275.0 470 40.0
THA.LOC104824183 Tarenaya hassleriana HOM05D005646 ORTHO05D006828 1.4e-71 274.2 356 46.6
ATR0217G018 Amborella trichopoda HOM05D005646 ORTHO05D006828 3.1e-71 273.1 355 48.5
Medtr4g071010 Medicago truncatula HOM05D005646 ORTHO05D006828 3.1e-71 273.1 320 50.6
arahy.Tifrunner.gnm1.ann1.2P0PPD Arachis hypogaea HOM05D005646 ORTHO05D006828 1.2e-70 271.2 349 47.0
Aqoxy1G00222 Aquilegia oxysepala HOM05D005646 ORTHO05D006828 2.6e-70 270.0 237 59.9
Carub.0004s2080 Capsella rubella HOM05D005646 ORTHO05D006828 9.9e-70 268.1 317 50.5
Lj9A646T48 Lonicera japonica HOM05D005646 ORTHO05D006828 9.9e-70 268.1 228 60.1
arahy.Tifrunner.gnm1.ann1.HJ7TPY Arachis hypogaea HOM05D005646 ORTHO05D006828 1.3e-69 267.7 349 46.7
SalBow5G2661 Salvia bowleyana HOM05D005646 ORTHO05D006828 7.1e-68 261.9 400 42.8
COL.COLO4_33459 Corchorus olitorius HOM05D005646 ORTHO05D006828 3.5e-67 259.6 265 52.5
Lalb_Chr03g0025471 Lupinus albus HOM05D005646 ORTHO05D006828 2.3e-66 256.9 328 45.1
unitig_746.g26627 Utricularia gibba HOM05D005646 ORTHO05D006828 3.0e-66 256.5 369 44.7
RcHm_v2.0_Chr7g0221681 Rosa chinensis HOM05D005646 ORTHO05D006828 2.8e-64 250.0 234 56.4
AL4G36080 Arabidopsis lyrata HOM05D005646 ORTHO05D006828 3.7e-64 249.6 320 46.6
FvH4_5g29000 Fragaria vesca HOM05D005646 ORTHO05D006828 3.7e-64 249.6 267 51.3
A03p21590 Brassica napus HOM05D005646 ORTHO05D006828 4.8e-64 249.2 346 46.0
FAN13G1025 Fragaria x ananassa HOM05D005646 ORTHO05D006828 6.2e-64 248.8 236 55.1
BraA03t11395Z Brassica rapa HOM05D005646 ORTHO05D006828 8.1e-64 248.4 346 46.2
FAN18G3275 Fragaria x ananassa HOM05D005646 ORTHO05D006828 8.1e-64 248.4 348 46.0
Sp4g21170 Schrenkiella parvula HOM05D005646 ORTHO05D006828 3.1e-63 246.5 317 48.3
AT2G38780 Arabidopsis thaliana HOM05D005646 ORTHO05D006828 1.5e-62 244.2 351 44.2
PSO063G6839 Papaver somniferum HOM05D005646 ORTHO05D006828 2.6e-62 243.4 269 50.2
vmacro13731 Vaccinium macrocarpon HOM05D005646 ORTHO05D006828 2.6e-62 243.4 703 30.3
FAN08G2254 Fragaria x ananassa HOM05D005646 ORTHO05D006828 2.9e-61 240.0 349 45.3
Actinidia19445 Actinidia chinensis HOM05D005646 ORTHO05D006828 3.8e-61 239.6 203 61.1
Thhalv10016593m.g Eutrema salsugineum HOM05D005646 ORTHO05D006828 2.5e-60 236.9 317 45.7
Aa31LG5G20900 Aethionema arabicum HOM05D005646 ORTHO05D006828 4.2e-60 236.1 319 46.4
C03p25580 Brassica napus HOM05D005646 ORTHO05D006828 2.7e-59 233.4 317 45.7
BolC3t14946H Brassica oleracea HOM05D005646 ORTHO05D006828 1.0e-58 231.5 345 45.5
CARHR133490 Cardamine hirsuta HOM05D005646 ORTHO05D006828 6.7e-58 228.8 359 41.2
Rhsim07G0062900 Rhododendron simsii HOM05D005646 ORTHO05D006828 2.4e-55 220.3 307 47.6
PSO341G0002 Papaver somniferum HOM05D005646 ORTHO05D006828 1.5e-54 217.6 177 59.9
SEGI_25656 Sequoiadendron giganteum HOM05D005646 ORTHO05D006828 1.6e-51 207.6 284 42.6
HPP92_001013 Vanilla planifolia HOM05D005646 ORTHO05D006828 1.6e-48 197.6 328 39.0
RcHm_v2.0_Chr2g0113191 Rosa chinensis HOM05D005646 ORTHO05D006828 4.8e-48 196.1 251 46.2
GSVIVG01000664001 Vitis vinifera HOM05D005646 ORTHO05D006828 2.4e-47 193.7 152 66.4
RcHm_v2.0_Chr4g0400611 Rosa chinensis HOM05D005646 ORTHO05D006828 1.5e-46 191.0 172 58.1
Zm00001eb347150 Zea mays HOM05D005646 ORTHO05D006828 1.0e-45 188.3 321 36.1
SMO145G0178 Selaginella moellendorffii HOM05D005646 ORTHO05D006828 4.1e-39 166.4 172 51.2
Sc15g0003140 Simmondsia chinensis HOM05D005646 ORTHO05D006828 1.2e-38 164.9 163 52.8
Glyma.18G124100 Glycine max HOM05D005646 ORTHO05D006828 4.5e-38 162.9 123 64.2
Mapoly0066s0082 Marchantia polymorpha HOM05D005646 ORTHO05D006828 1.7e-37 161.0 172 48.8
AagrBONN_evm.TU.Sc2ySwM_228.261 Anthoceros agrestis HOM05D005646 ORTHO05D006828 1.4e-36 157.9 171 47.4
RcHm_v2.0_Chr2g0154951 Rosa chinensis HOM05D005646 ORTHO05D006828 3.7e-32 143.3 155 50.3
Pp3c21_7940 Physcomitrium patens HOM05D005646 ORTHO05D006828 7.7e-30 135.6 350 31.4
PGSC0003DMG400000847 Solanum tuberosum HOM05D005646 ORTHO05D006828 2.5e-28 130.6 116 56.0
Actinidia19446 Actinidia chinensis HOM05D005646 ORTHO05D006828 9.7e-25 118.6 225 40.4
CBR_g29393 Chara braunii HOM05D005646 ORTHO05D006828 2.2e-24 117.5 165 41.8
RcHm_v2.0_Chr4g0400621 Rosa chinensis HOM05D005646 ORTHO05D006828 3.1e-23 113.6 88 61.4
AL4G20430 Arabidopsis lyrata HOM05D005646 ORTHO05D006828 9.4e-20 102.1 145 39.3
Cre13.g607900 Chlamydomonas reinhardtii HOM05D005646 ORTHO05D006828 5.7e-17 92.8 108 42.6
Os05g0381500 Oryza sativa ssp. japonica HOM05D005646 ORTHO05D006828 7.5e-17 92.4 84 50.0
CARHR125840 Cardamine hirsuta HOM05D005646 ORTHO05D006828 6.3e-16 89.4 117 42.7
COL.COLO4_25675 Corchorus olitorius HOM05D005646 ORTHO05D006828 1.1e-15 88.6 65 58.5
Glyma.12G039732 Glycine max HOM05D005646 ORTHO05D006828 5.9e-14 82.8 202 36.1
PRCOL_00006924 Prasinoderma coloniale HOM05D005646 ORTHO05D006828 5.5e-12 76.3 104 41.3
MCO02G103 Micromonas commoda HOM05D005646 ORTHO05D006828 3.6e-11 73.6 96 39.6
RcHm_v2.0_Chr1g0326961 Rosa chinensis HOM05D005646 ORTHO05D006828 8.0e-11 72.4 50 64.0
RcHm_v2.0_Chr4g0400631 Rosa chinensis HOM05D005646 ORTHO05D006828 1.0e-10 72.0 47 68.1
SalBow1G3971 Salvia bowleyana HOM05D005646 ORTHO05D006828 8.8e-10 68.9 300 26.3
arahy.Tifrunner.gnm1.ann1.7I4JN8 Arachis hypogaea HOM05D005646 ORTHO05D006828 2.0e-09 67.8 42 73.8
Sc03g0006740 Simmondsia chinensis HOM05D005646 ORTHO05D006828 4.1e-07 60.1 125 36.8


User provided reference genes

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