Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv31448 Davidia involucrata HOM05D007136 ORTHO05D008986 1.3e-174 616.3 312 100.0
Dinv26003 Davidia involucrata HOM05D007136 ORTHO05D008986 2.2e-86 323.2 228 74.1
Hma1.2p1_0683F.1_g202870 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 4.1e-80 302.4 231 68.0
Rhsim09G0165500 Rhododendron simsii HOM05D007136 ORTHO05D008986 1.3e-78 297.4 231 67.1
vmacro10240 Vaccinium macrocarpon HOM05D007136 ORTHO05D008986 2.3e-78 296.6 231 67.1
Cc02_g07990 Coffea canephora HOM05D007136 ORTHO05D008986 2.5e-77 293.1 231 65.4
TAR633G2090 Trochodendron aralioides HOM05D000330 ORTHO05D008986 9.8e-74 281.2 231 63.2
GSVIVG01016535001 Vitis vinifera HOM05D007136 ORTHO05D008986 1.7e-73 280.4 231 64.5
Migut.F01500 Erythranthe guttata HOM05D007136 ORTHO05D008986 9.2e-72 274.6 232 62.1
Thecc.10G044100 Theobroma cacao HOM05D007136 ORTHO05D008986 3.9e-70 269.2 244 57.4
Actinidia29223 Actinidia chinensis HOM05D007136 ORTHO05D008986 6.6e-70 268.5 231 62.8
Nn2g10391 Nelumbo nucifera HOM05D007136 ORTHO05D008986 6.6e-70 268.5 231 61.0
Haze_17049 Corylus avellana HOM05D007136 ORTHO05D008986 1.1e-69 267.7 228 61.4
SGA_v2.0_scaffold86G26943 Striga asiatica HOM05D007136 ORTHO05D008986 5.6e-69 265.4 228 60.1
MSTRG.8246 Avicennia marina HOM05D007136 ORTHO05D008986 7.3e-69 265.0 231 60.6
CiPaw.01G285300 Carya illinoinensis HOM05D007136 ORTHO05D008986 2.1e-68 263.5 228 60.1
Ciclev10032197m.g Citrus clementina HOM05D007136 ORTHO05D008986 3.6e-68 262.7 230 59.1
DCAR_027635 Daucus carota HOM05D007136 ORTHO05D008986 3.6e-68 262.7 232 59.1
Prupe.2G233400 Prunus persica HOM05D007136 ORTHO05D008986 3.1e-67 259.6 231 57.1
Potri.010G205900 Populus trichocarpa HOM05D007136 ORTHO05D008986 2.0e-66 256.9 230 58.3
Lsat_1_v5_gn_2_119701 Lactuca sativa HOM05D007136 ORTHO05D008986 3.7e-65 252.7 238 58.0
RcHm_v2.0_Chr1g0366511 Rosa chinensis HOM05D007136 ORTHO05D008986 3.7e-65 252.7 231 56.7
Nitab4.5_0000065g0080 Nicotiana tabacum HOM05D007136 ORTHO05D008986 6.4e-65 251.9 230 57.4
Gohir.D10G226000 Gossypium hirsutum HOM05D007136 ORTHO05D008986 1.1e-64 251.1 244 54.1
CANSAT56G3368 Cannabis sativa HOM05D007136 ORTHO05D008986 1.4e-64 250.8 231 57.6
Sopen06g013560 Solanum pennellii HOM05D007136 ORTHO05D008986 1.9e-64 250.4 237 55.7
ECA238G4577 Erigeron canadensis HOM05D007136 ORTHO05D008986 3.2e-64 249.6 237 54.9
AUR62038352 Chenopodium quinoa HOM05D007136 ORTHO05D008986 4.1e-64 249.2 228 56.1
MD07G1196400 Malus domestica HOM05D007136 ORTHO05D008986 4.1e-64 249.2 231 55.0
Gorai.011G257200 Gossypium raimondii HOM05D007136 ORTHO05D008986 5.4e-64 248.8 244 53.7
TWI15G0021 Tripterygium wilfordii HOM05D007136 ORTHO05D008986 9.2e-64 248.1 226 56.2
Gohir.A10G217300 Gossypium hirsutum HOM05D007136 ORTHO05D008986 1.2e-63 247.7 244 53.7
Nitab4.5_0000931g0010 Nicotiana tabacum HOM05D007136 ORTHO05D008986 1.6e-63 247.3 231 54.5
FAN03G0232 Fragaria x ananassa HOM05D007136 ORTHO05D008986 2.0e-63 246.9 222 56.3
Manes.07G114900 Manihot esculenta HOM05D007136 ORTHO05D008986 2.0e-63 246.9 225 56.0
FvH4_7g22120 Fragaria vesca HOM05D007136 ORTHO05D008986 4.6e-63 245.7 231 54.5
FAN01G1261 Fragaria x ananassa HOM05D007136 ORTHO05D008986 4.6e-63 245.7 231 54.5
Hund20032 Selenicereus undatus HOM05D007136 ORTHO05D008986 1.3e-62 244.2 228 55.3
FAN06G2040 Fragaria x ananassa HOM05D007136 ORTHO05D008986 2.3e-62 243.4 231 54.1
SalBow6G2062 Salvia bowleyana HOM05D007136 ORTHO05D008986 2.3e-62 243.4 231 54.5
HanXRQChr14g0458151 Helianthus annuus HOM05D007136 ORTHO05D008986 3.0e-62 243.0 237 55.3
Glyma.18G289500 Glycine max HOM05D007136 ORTHO05D008986 5.0e-62 242.3 231 53.2
FAN01G1850 Fragaria x ananassa HOM05D007136 ORTHO05D008986 8.6e-62 241.5 231 54.1
Atru.chr12.462 Acer truncatum HOM05D007136 ORTHO05D008986 3.3e-61 239.6 231 55.0
FAN06G2061 Fragaria x ananassa HOM05D007136 ORTHO05D008986 5.6e-61 238.8 231 53.2
VMungo1383G1564 Vigna mungo HOM05D007136 ORTHO05D008986 5.6e-61 238.8 237 52.7
ClCG09G019950 Citrullus lanatus HOM05D007136 ORTHO05D008986 7.3e-61 238.4 231 55.0
Cfa001492 Carpinus fangiana HOM05D007136 ORTHO05D008986 1.2e-60 237.7 207 59.4
PGR044G0021 Punica granatum HOM05D007136 ORTHO05D008986 4.7e-60 235.7 231 53.2
Peaxi162Scf00658g00728 Petunia axillaris HOM05D007136 ORTHO05D008986 8.1e-60 235.0 237 53.6
Ah.16g107010 Amaranthus hybridus HOM05D007136 ORTHO05D008986 1.1e-59 234.6 237 51.9
Phvul.008G012700 Phaseolus vulgaris HOM05D007136 ORTHO05D008986 1.4e-59 234.2 229 54.6
Atru.chr12.484 Acer truncatum HOM05D007136 ORTHO05D008986 2.3e-59 233.4 231 53.7
EL10Ac2g03388 Beta vulgaris HOM05D007136 ORTHO05D008986 2.3e-59 233.4 263 49.8
Eucgr.J00020 Eucalyptus grandis HOM05D007136 ORTHO05D008986 3.1e-59 233.0 243 49.8
Sc09g0007080 Simmondsia chinensis HOM05D007136 ORTHO05D008986 8.9e-59 231.5 222 55.9
Sabra10G0159100 Salix brachista HOM05D007136 ORTHO05D008986 3.4e-58 229.6 280 47.9
Ca_07254_v3 Cicer arietinum L. HOM05D007136 ORTHO05D008986 4.4e-58 229.2 231 53.2
MBI05_g22899_MAGBIO Magnolia biondii HOM05D007136 ORTHO05D008986 4.4e-58 229.2 227 55.1
Psat3g181320 Pisum sativum HOM05D007136 ORTHO05D008986 9.8e-58 228.0 231 52.8
QL08p059192 Quercus lobata HOM05D007136 ORTHO05D008986 2.9e-57 226.5 353 40.8
arahy.Tifrunner.gnm1.ann1.IQ4HGL Arachis hypogaea HOM05D007136 ORTHO05D008986 4.9e-57 225.7 245 51.0
arahy.Tifrunner.gnm1.ann1.RSMT0C Arachis hypogaea HOM05D007136 ORTHO05D008986 4.9e-57 225.7 245 51.0
Lj1g0011729 Lotus japonicus HOM05D007136 ORTHO05D008986 4.9e-57 225.7 231 52.4
Sed0006263 Sechium edule HOM05D007136 ORTHO05D008986 1.9e-56 223.8 232 51.3
Aqoxy2G02097 Aquilegia oxysepala HOM05D007136 ORTHO05D008986 1.6e-55 220.7 249 47.4
COL.COLO4_14997 Corchorus olitorius HOM05D007136 ORTHO05D008986 7.8e-55 218.4 258 48.1
Medtr7g024560 Medicago truncatula HOM05D007136 ORTHO05D008986 7.8e-55 218.4 231 49.4
Lalb_Chr10g0091721 Lupinus albus HOM05D007136 ORTHO05D008986 1.3e-54 217.6 231 49.4
CsaV3_5G026510 Cucumis sativus L. HOM05D007136 ORTHO05D008986 1.7e-54 217.2 231 49.8
Hma1.2p1_0683F.1_g202860 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 2.3e-54 216.9 153 73.2
TPR.G15525 Trifolium pratense HOM05D007136 ORTHO05D008986 5.1e-54 215.7 231 49.8
MELO3C021650.2 Cucumis melo HOM05D007136 ORTHO05D008986 8.6e-54 214.9 231 49.8
CSS0027543 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 1.9e-53 213.8 171 66.7
CSS0005502 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 2.5e-53 213.4 171 66.7
ATR0559G284 Amborella trichopoda HOM05D007136 ORTHO05D008986 1.2e-52 211.1 227 48.5
Lj4C909G7 Lonicera japonica HOM05D007136 ORTHO05D008986 3.1e-51 206.5 152 71.7
PSO339G3352 Papaver somniferum HOM05D007136 ORTHO05D008986 3.1e-51 206.5 230 47.4
unitig_736.g22315 Utricularia gibba HOM05D007136 ORTHO05D008986 3.1e-51 206.5 250 48.4
HPP92_001682 Vanilla planifolia HOM05D007136 ORTHO05D008986 3.1e-51 206.5 228 48.2
PSO151G0201 Papaver somniferum HOM05D007136 ORTHO05D008986 1.2e-50 204.5 232 46.1
THA.LOC104799346 Tarenaya hassleriana HOM05D007136 ORTHO05D008986 4.9e-49 199.1 232 46.1
Sp3g03000 Schrenkiella parvula HOM05D007136 ORTHO05D008986 3.0e-46 189.9 232 45.7
BraA05t23073Z Brassica rapa HOM05D007136 ORTHO05D008986 1.1e-45 188.0 249 42.6
A05p43340 Brassica napus HOM05D007136 ORTHO05D008986 1.5e-45 187.6 229 44.5
C05p63040 Brassica napus HOM05D007136 ORTHO05D008986 1.9e-45 187.2 232 44.4
BolC5t34957H Brassica oleracea HOM05D007136 ORTHO05D008986 3.3e-45 186.4 253 42.3
Aa31LG5G14590 Aethionema arabicum HOM05D007136 ORTHO05D008986 4.3e-45 186.0 238 44.1
Os03g0276600 Oryza sativa ssp. japonica HOM05D007136 ORTHO05D008986 3.6e-44 183.0 232 43.5
BcaC05g30543 Brassica carinata HOM05D007136 ORTHO05D008986 6.2e-44 182.2 232 43.5
CARHR078150 Cardamine hirsuta HOM05D007136 ORTHO05D008986 6.2e-44 182.2 232 42.7
Carub.0003s0327 Capsella rubella HOM05D007136 ORTHO05D008986 4.0e-43 179.5 232 43.1
Thhalv10021212m.g Eutrema salsugineum HOM05D007136 ORTHO05D008986 2.6e-42 176.8 232 42.7
Duzib106G1934 Durio zibethinus HOM05D007136 ORTHO05D008986 5.8e-42 175.6 176 54.0
Solyc06g043070.4 Solanum lycopersicum HOM05D007136 ORTHO05D008986 2.2e-41 173.7 153 57.5
CDE09G1315 Ceratophyllum demersum HOM05D007136 ORTHO05D008986 3.8e-41 172.9 220 44.5
AL3G13930 Arabidopsis lyrata HOM05D007136 ORTHO05D008986 4.2e-40 169.5 232 41.4
Cpa.g.sc1.397 Carica papaya HOM05D007136 ORTHO05D008986 1.2e-39 167.9 144 61.1
Zm00001eb012480 Zea mays HOM05D007136 ORTHO05D008986 9.6e-37 158.3 206 42.7
SEGI_31981 Sequoiadendron giganteum HOM05D007136 ORTHO05D008986 2.4e-35 153.7 250 36.4
AUR62041861 Chenopodium quinoa HOM05D007136 ORTHO05D008986 3.5e-31 139.8 112 62.5
AT3G04020 Arabidopsis thaliana HOM05D007136 ORTHO05D008986 9.0e-27 125.2 148 45.3
Glyma.02G092900 Glycine max HOM05D007136 ORTHO05D008986 9.9e-26 121.7 110 53.6
Pp3c12_11030 Physcomitrium patens HOM05D007136 ORTHO05D008986 1.3e-22 111.3 258 27.5
AUR62041862 Chenopodium quinoa HOM05D007136 ORTHO05D008986 8.7e-22 108.6 100 56.0
CSS0002221 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 5.3e-19 99.4 55 83.6
CSS0010171 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 5.3e-19 99.4 55 83.6
Solyc06g043060.1 Solanum lycopersicum HOM05D007136 ORTHO05D008986 5.8e-18 95.9 56 76.8
CAN.G1401.1 Capsicum annuum HOM05D007136 ORTHO05D008986 3.8e-17 93.2 58 72.4
FAN10G3057 Fragaria x ananassa HOM05D007136 ORTHO05D025577 6.0e-15 85.9 56 66.1
Mapoly0002s0030 Marchantia polymorpha HOM05D007136 ORTHO05D008986 1.9e-13 80.9 208 23.6


User provided reference genes

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