Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv31364 Davidia involucrata HOM05D005940 ORTHO05D007027 3.2e-170 601.7 305 100.0
Hma1.2p1_0192F.1_g083550 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 3.3e-114 415.6 313 70.0
TAR623G0325 Trochodendron aralioides HOM05D005940 ORTHO05D007027 3.0e-112 409.1 302 68.5
GSVIVG01016348001 Vitis vinifera HOM05D005940 ORTHO05D007027 2.4e-109 399.4 298 67.8
Gorai.012G093100 Gossypium raimondii HOM05D005940 ORTHO05D007027 2.1e-105 386.3 309 62.5
Cfa001588 Carpinus fangiana HOM05D005940 ORTHO05D007027 3.6e-105 385.6 302 64.2
Thecc.10G067000 Theobroma cacao HOM05D005940 ORTHO05D007027 2.3e-104 382.9 304 64.8
Oeu055049.1 Olea europaea HOM05D005940 ORTHO05D007027 1.2e-103 380.6 300 65.0
Nitab4.5_0000061g0280 Nicotiana tabacum HOM05D005940 ORTHO05D007027 1.5e-103 380.2 301 62.8
Gohir.D04G082400 Gossypium hirsutum HOM05D005940 ORTHO05D007027 4.4e-103 378.6 309 62.1
TWI38G0416 Tripterygium wilfordii HOM05D005940 ORTHO05D007027 4.4e-103 378.6 302 65.2
Glyma.20G145700 Glycine max HOM05D005940 ORTHO05D007027 1.7e-102 376.7 302 64.2
Cc09_g02600 Coffea canephora HOM05D005940 ORTHO05D007027 1.1e-101 374.0 298 61.7
Lj1A925T62 Lonicera japonica HOM05D005940 ORTHO05D007027 1.4e-101 373.6 272 69.5
Nn2g10645 Nelumbo nucifera HOM05D005940 ORTHO05D007027 1.4e-101 373.6 303 64.0
Duzib114G0016 Durio zibethinus HOM05D005940 ORTHO05D007027 9.2e-101 370.9 307 63.5
FAN10G2498 Fragaria x ananassa HOM05D005940 ORTHO05D007027 1.2e-100 370.5 298 64.8
Solyc04g049890.4 Solanum lycopersicum HOM05D005940 ORTHO05D007027 1.2e-100 370.5 301 62.1
CiPaw.02G177100 Carya illinoinensis HOM05D005940 ORTHO05D007027 2.7e-100 369.4 303 62.7
FvH4_7g20280 Fragaria vesca HOM05D005940 ORTHO05D007027 2.7e-100 369.4 298 64.4
FAN06G4195 Fragaria x ananassa HOM05D005940 ORTHO05D007027 1.3e-99 367.1 298 64.1
Atru.chr12.628 Acer truncatum HOM05D005940 ORTHO05D007027 5.0e-99 365.2 301 64.8
PGSC0003DMG400010575 Solanum tuberosum HOM05D005940 ORTHO05D007027 6.6e-99 364.8 301 60.5
DCAR_019137 Daucus carota HOM05D005940 ORTHO05D007027 1.5e-98 363.6 303 61.7
Migut.F01794 Erythranthe guttata HOM05D005940 ORTHO05D007027 3.3e-98 362.5 301 62.8
Ciclev10033357m.g Citrus clementina HOM05D005940 ORTHO05D007027 9.5e-98 360.9 306 60.5
QL08p056963 Quercus lobata HOM05D005940 ORTHO05D007027 1.2e-97 360.5 302 62.6
Sopen04g020430 Solanum pennellii HOM05D005940 ORTHO05D007027 1.2e-97 360.5 308 60.1
ClCG02G013840 Citrullus lanatus HOM05D005940 ORTHO05D007027 2.8e-97 359.4 304 62.5
Psat6g207800 Pisum sativum HOM05D005940 ORTHO05D007027 2.8e-97 359.4 302 61.3
CANSAT25G0128 Cannabis sativa HOM05D005940 ORTHO05D007027 3.6e-97 359.0 311 59.2
Peaxi162Scf00208g00211 Petunia axillaris HOM05D005940 ORTHO05D007027 3.6e-97 359.0 301 58.5
VMungo0720G1649 Vigna mungo HOM05D005940 ORTHO05D007027 4.7e-97 358.6 304 62.2
ECA232G2986 Erigeron canadensis HOM05D005940 ORTHO05D007027 6.2e-97 358.2 302 61.6
Prupe.2G219400 Prunus persica HOM05D005940 ORTHO05D007027 1.8e-96 356.7 302 62.6
Eucgr.G02795 Eucalyptus grandis HOM05D005940 ORTHO05D007027 4.0e-96 355.5 303 59.4
Potri.010G216500 Populus trichocarpa HOM05D005940 ORTHO05D007027 4.0e-96 355.5 305 60.0
FAN01G1689 Fragaria x ananassa HOM05D005940 ORTHO05D007027 8.9e-96 354.4 298 63.4
Prupe.2G216400 Prunus persica HOM05D005940 ORTHO05D007027 1.5e-95 353.6 302 62.3
Lj5g0027680 Lotus japonicus HOM05D005940 ORTHO05D007027 7.5e-95 351.3 302 58.6
Ca_10908_v3 Cicer arietinum L. HOM05D005940 ORTHO05D007027 3.7e-94 349.0 301 59.5
Medtr1g103870 Medicago truncatula HOM05D005940 ORTHO05D007027 8.3e-94 347.8 302 58.6
Phvul.007G056900 Phaseolus vulgaris HOM05D005940 ORTHO05D007027 1.9e-93 346.7 302 59.3
Sed0018989 Sechium edule HOM05D005940 ORTHO05D007027 1.2e-92 344.0 304 59.5
Medtr1g103900 Medicago truncatula HOM05D005940 ORTHO05D007027 1.6e-92 343.6 303 58.7
Lsat_1_v5_gn_1_128021 Lactuca sativa HOM05D005940 ORTHO05D007027 2.7e-92 342.8 302 58.3
TPR.G5540 Trifolium pratense HOM05D005940 ORTHO05D007027 2.7e-92 342.8 303 56.4
PSO170G0010 Papaver somniferum HOM05D005940 ORTHO05D007027 6.0e-92 341.7 302 57.6
Rhsim09G0154600 Rhododendron simsii HOM05D005940 ORTHO05D007027 7.8e-92 341.3 277 65.3
HanXRQChr16g0510921 Helianthus annuus HOM05D005940 ORTHO05D007027 1.0e-91 340.9 296 58.4
RcHm_v2.0_Chr1g0364231 Rosa chinensis HOM05D005940 ORTHO05D007027 1.7e-91 340.1 298 60.1
Aqoxy7G03246 Aquilegia oxysepala HOM05D005940 ORTHO05D007027 3.9e-91 339.0 305 58.0
PSO357G0422 Papaver somniferum HOM05D005940 ORTHO05D007027 5.1e-91 338.6 302 57.6
CsaV3_5G006320 Cucumis sativus L. HOM05D005940 ORTHO05D007027 3.3e-90 335.9 304 59.5
Medtr1g030720 Medicago truncatula HOM05D005940 ORTHO05D007027 4.3e-90 335.5 303 58.1
Gohir.A05G343900 Gossypium hirsutum HOM05D005940 ORTHO05D007027 5.6e-90 335.1 280 60.0
MD01G1112500 Malus domestica HOM05D005940 ORTHO05D007027 1.4e-88 330.5 300 61.0
Cpa.g.sc1.266 Carica papaya HOM05D005940 ORTHO05D007027 5.8e-87 325.1 277 62.1
Manes.10G041400 Manihot esculenta HOM05D005940 ORTHO05D007027 9.9e-87 324.3 283 59.4
EL10Ac2g03550 Beta vulgaris HOM05D005940 ORTHO05D007027 2.2e-86 323.2 303 57.1
PGR102G2278 Punica granatum HOM05D005940 ORTHO05D007027 3.8e-86 322.4 303 57.8
arahy.Tifrunner.gnm1.ann1.N3JKH2 Arachis hypogaea HOM05D005940 ORTHO05D007027 2.4e-85 319.7 304 54.3
Lalb_Chr21g0304671 Lupinus albus HOM05D005940 ORTHO05D007027 4.1e-85 318.9 299 57.2
arahy.Tifrunner.gnm1.ann1.3UA0UH Arachis hypogaea HOM05D005940 ORTHO05D007027 7.1e-85 318.2 304 54.6
THA.LOC104809986 Tarenaya hassleriana HOM05D005940 ORTHO05D007027 7.8e-84 314.7 308 55.5
MELO3C011725.2 Cucumis melo HOM05D005940 ORTHO05D007027 4.3e-82 308.9 303 56.4
Thhalv10010491m.g Eutrema salsugineum HOM05D005940 ORTHO05D007027 4.3e-82 308.9 309 56.6
BolC8t50626H Brassica oleracea HOM05D005940 ORTHO05D007027 4.7e-81 305.4 305 55.7
Sabra10G0167600 Salix brachista HOM05D005940 ORTHO05D007027 4.7e-81 305.4 276 58.0
BcaNung04648 Brassica carinata HOM05D005940 ORTHO05D007027 1.1e-80 304.3 305 55.7
C08p30200 Brassica napus HOM05D005940 ORTHO05D007027 1.1e-80 304.3 305 55.7
BraA09t40251Z Brassica rapa HOM05D005940 ORTHO05D007027 6.9e-80 301.6 305 55.7
Sp5g07450 Schrenkiella parvula HOM05D005940 ORTHO05D007027 2.6e-79 299.7 308 54.5
AUR62020800 Chenopodium quinoa HOM05D005940 ORTHO05D007027 4.4e-79 298.9 272 58.5
FAN03G1319 Fragaria x ananassa HOM05D005940 ORTHO05D007027 5.8e-79 298.5 253 62.5
CARHR164970 Cardamine hirsuta HOM05D005940 ORTHO05D007027 7.6e-79 298.1 304 54.6
A09p47960 Brassica napus HOM05D005940 ORTHO05D007027 9.9e-79 297.7 305 54.8
BcaB01g00141 Brassica carinata HOM05D005940 ORTHO05D007027 2.2e-78 296.6 306 54.6
Haze_16942 Corylus avellana HOM05D005940 ORTHO05D007027 3.8e-78 295.8 228 64.9
AL5G36080 Arabidopsis lyrata HOM05D005940 ORTHO05D007027 2.4e-77 293.1 309 54.4
Aa31sc33G20 Aethionema arabicum HOM05D005940 ORTHO05D007027 3.5e-76 289.3 325 51.4
COL.COLO4_23758 Corchorus olitorius HOM05D005940 ORTHO05D007027 2.3e-75 286.6 209 66.0
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 3.0e-75 286.2 302 52.6
AUR62027909 Chenopodium quinoa HOM05D005940 ORTHO05D007027 8.7e-75 284.6 305 51.5
Hma1.2p1_0192F.1_g083560 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 8.7e-75 284.6 209 69.9
Carub.0005s2159 Capsella rubella HOM05D005940 ORTHO05D007027 3.3e-74 282.7 309 53.4
SalBow3G3596 Salvia bowleyana HOM05D005940 ORTHO05D007027 1.6e-73 280.4 304 50.7
CDE11G0619 Ceratophyllum demersum HOM05D005940 ORTHO05D007027 1.1e-72 277.7 302 50.3
CAN.G693.9 Capsicum annuum HOM05D005940 ORTHO05D007027 5.3e-72 275.4 252 57.1
Nitab4.5_0003582g0030 Nicotiana tabacum HOM05D005940 ORTHO05D007027 5.3e-72 275.4 214 65.0
HPP92_019787 Vanilla planifolia HOM05D005940 ORTHO05D007027 2.4e-69 266.5 304 50.7
ATR0594G026 Amborella trichopoda HOM05D005940 ORTHO05D007027 5.4e-69 265.4 299 52.5
CSS0031020 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 6.0e-68 261.9 191 72.3
AT3G54970 Arabidopsis thaliana HOM05D005940 ORTHO05D007027 3.8e-62 242.7 277 52.7
Zm00001eb194920 Zea mays HOM05D005940 ORTHO05D007027 2.6e-55 219.9 297 45.1
PGR142G2620 Punica granatum HOM05D005940 ORTHO05D007027 3.0e-51 206.5 230 51.3
AagrBONN_evm.TU.Sc2ySwM_344.1014 Anthoceros agrestis HOM05D005940 ORTHO05D007027 2.1e-44 183.7 302 37.1
Mapoly0016s0023 Marchantia polymorpha HOM05D005940 ORTHO05D007027 4.6e-44 182.6 305 36.7
Hund22470 Selenicereus undatus HOM05D005940 ORTHO05D007027 5.1e-43 179.1 298 39.3
SHI28162 Sapria himalayana HOM05D005940 ORTHO05D007027 4.5e-39 166.0 234 45.3
SMO329G0058 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 1.3e-38 164.5 302 36.1
SEGI_22112 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 2.9e-38 163.3 224 43.8
Pp3c1_190 Physcomitrium patens HOM05D005940 ORTHO05D007027 2.1e-36 157.1 287 38.7
BcaNung04643 Brassica carinata HOM05D005940 ORTHO05D007027 2.7e-36 156.8 219 45.2
Os02g0252600 Oryza sativa ssp. japonica HOM05D005940 ORTHO05D007027 7.9e-36 155.2 224 45.5
Sc06g0001810 Simmondsia chinensis HOM05D005940 ORTHO05D007027 2.0e-34 150.6 114 66.7
SMO201G0153 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 3.1e-32 143.3 298 33.6
Medtr1g030710 Medicago truncatula HOM05D005940 ORTHO05D007027 4.5e-31 139.4 227 41.4
FAN06G2675 Fragaria x ananassa HOM05D005940 ORTHO05D007027 3.6e-28 129.8 236 40.7
unitig_46.g18613 Utricularia gibba HOM05D005940 ORTHO05D007027 8.0e-28 128.6 195 42.6
CBR_g3301 Chara braunii HOM05D003248 ORTHO05D000301 5.2e-27 125.9 371 28.8
SHI28160 Sapria himalayana HOM05D000105 ORTHO05D000023 7.7e-15 85.5 75 60.0
HPP92_019693 Vanilla planifolia HOM05D005940 ORTHO05D002769 1.7e-09 67.8 58 60.3
Cre01.g033516 Chlamydomonas reinhardtii HOM05D005940 ORTHO05D007027 1.8e-08 64.3 165 29.7
SMO112G0074 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 1.8e-08 64.3 183 31.7
CSS0028355 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 2.4e-08 63.9 38 78.9
PRCOL_00002492 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 4.1e-08 63.2 207 28.0
PRCOL_00002155 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 3.8e-06 56.6 194 30.4


User provided reference genes

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