Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv31345 Davidia involucrata HOM05D005240 ORTHO05D006471 1.7e-84 315.8 147 100.0
Duzib114G0729 Durio zibethinus HOM05D005240 ORTHO05D006471 1.9e-59 232.6 137 78.1
Hma1.2p1_0453F.1_g156180 Hydrangea macrophylla HOM05D005240 ORTHO05D006471 1.9e-59 232.6 136 80.1
Gohir.A05G344500 Gossypium hirsutum HOM05D005240 ORTHO05D006471 4.2e-59 231.5 137 78.8
Thecc.10G068200 Theobroma cacao HOM05D005240 ORTHO05D006471 5.5e-59 231.1 137 77.4
VMungo0720G3076 Vigna mungo HOM05D005240 ORTHO05D006471 5.5e-59 231.1 137 78.1
Gorai.012G093700 Gossypium raimondii HOM05D005240 ORTHO05D006471 1.2e-58 229.9 137 78.1
Prupe.2G218200 Prunus persica HOM05D005240 ORTHO05D006471 2.1e-58 229.2 142 75.4
CSS0026127 Camellia sinensis var. sinensis HOM05D005240 ORTHO05D006471 2.7e-58 228.8 128 83.6
Gohir.D04G083000 Gossypium hirsutum HOM05D005240 ORTHO05D006471 2.7e-58 228.8 137 77.4
GSVIVG01016337001 Vitis vinifera HOM05D005240 ORTHO05D006471 4.6e-58 228.0 137 77.4
Cc09_g02730 Coffea canephora HOM05D005240 ORTHO05D006471 7.9e-58 227.3 137 76.6
TAR636G2864 Trochodendron aralioides HOM05D005240 ORTHO05D006471 3.0e-57 225.3 137 78.8
Actinidia38251 Actinidia chinensis HOM05D005240 ORTHO05D006471 3.9e-57 224.9 137 81.0
Lj5g0013716 Lotus japonicus HOM05D005240 ORTHO05D006471 5.1e-57 224.6 137 75.2
Phvul.007G091800 Phaseolus vulgaris HOM05D005240 ORTHO05D006471 8.8e-57 223.8 137 75.2
TWI15G1019 Tripterygium wilfordii HOM05D005240 ORTHO05D006471 1.1e-56 223.4 137 75.2
CiPaw.01G276500 Carya illinoinensis HOM05D005240 ORTHO05D006471 1.9e-56 222.6 140 75.0
Migut.F01799 Erythranthe guttata HOM05D005240 ORTHO05D006471 2.5e-56 222.2 137 75.9
RcHm_v2.0_Chr1g0364101 Rosa chinensis HOM05D005240 ORTHO05D006471 2.5e-56 222.2 140 75.0
arahy.Tifrunner.gnm1.ann1.CT8M8A Arachis hypogaea HOM05D005240 ORTHO05D006471 3.3e-56 221.9 137 73.0
vmacro17506 Vaccinium macrocarpon HOM05D005240 ORTHO05D006471 4.3e-56 221.5 131 78.6
Medtr1g095890 Medicago truncatula HOM05D005240 ORTHO05D006471 7.4e-56 220.7 138 76.1
QL08p056831 Quercus lobata HOM05D005240 ORTHO05D006471 7.4e-56 220.7 139 74.8
Eucgr.J01124 Eucalyptus grandis HOM05D005240 ORTHO05D006471 9.7e-56 220.3 137 75.9
Nn2g13000 Nelumbo nucifera HOM05D005240 ORTHO05D006471 9.7e-56 220.3 137 74.5
FAN03G2612 Fragaria x ananassa HOM05D005240 ORTHO05D006471 1.3e-55 219.9 140 74.3
Lalb_Chr06g0162141 Lupinus albus HOM05D005240 ORTHO05D006471 1.3e-55 219.9 137 75.2
PGR044G1235 Punica granatum HOM05D005240 ORTHO05D006471 1.3e-55 219.9 141 76.6
Glyma.10G213900 Glycine max HOM05D005240 ORTHO05D006471 1.7e-55 219.5 137 75.9
MD07G1179100 Malus domestica HOM05D005240 ORTHO05D006471 1.7e-55 219.5 140 75.7
Nitab4.5_0000061g0160 Nicotiana tabacum HOM05D005240 ORTHO05D006471 1.7e-55 219.5 137 74.5
Sc14g0005480 Simmondsia chinensis HOM05D005240 ORTHO05D006471 1.7e-55 219.5 137 75.9
arahy.Tifrunner.gnm1.ann1.9PA5H9 Arachis hypogaea HOM05D005240 ORTHO05D006471 2.8e-55 218.8 137 71.5
FvH4_7g20150 Fragaria vesca HOM05D005240 ORTHO05D006471 2.8e-55 218.8 138 73.9
FAN06G0525 Fragaria x ananassa HOM05D005240 ORTHO05D006471 2.8e-55 218.8 138 73.9
Peaxi162Scf00373g00310 Petunia axillaris HOM05D005240 ORTHO05D006471 8.2e-55 217.2 136 75.0
arahy.Tifrunner.gnm1.ann1.D7L05R Arachis hypogaea HOM05D005240 ORTHO05D006471 1.8e-54 216.1 137 72.3
Psat6g186000 Pisum sativum HOM05D005240 ORTHO05D006471 1.8e-54 216.1 137 74.5
Ca_10594_v3 Cicer arietinum L. HOM05D005240 ORTHO05D006471 2.4e-54 215.7 136 76.5
Nitab4.5_0001721g0020 Nicotiana tabacum HOM05D005240 ORTHO05D006471 2.4e-54 215.7 137 73.7
Sopen10g001790 Solanum pennellii HOM05D005240 ORTHO05D006471 4.1e-54 214.9 136 73.5
Thecc.10G068300 Theobroma cacao HOM05D005240 ORTHO05D006471 5.3e-54 214.5 137 73.7
TPR.G10956 Trifolium pratense HOM05D005240 ORTHO05D006471 6.9e-54 214.2 132 76.5
TWI38G0703 Tripterygium wilfordii HOM05D005240 ORTHO05D006471 6.9e-54 214.2 137 73.7
Aqoxy4G03197 Aquilegia oxysepala HOM05D005240 ORTHO05D006471 9.1e-54 213.8 137 71.5
Lsat_1_v5_gn_2_115080 Lactuca sativa HOM05D005240 ORTHO05D006471 9.1e-54 213.8 136 73.5
Atru.chr12.634 Acer truncatum HOM05D005240 ORTHO05D006471 1.2e-53 213.4 139 74.8
FAN10G3611 Fragaria x ananassa HOM05D005240 ORTHO05D006471 1.5e-53 213.0 138 72.5
Manes.10G042700 Manihot esculenta HOM05D005240 ORTHO05D006471 1.5e-53 213.0 136 72.8
HanXRQChr07g0200441 Helianthus annuus HOM05D005240 ORTHO05D006471 2.0e-53 212.6 136 72.8
Solyc10g005830.3 Solanum lycopersicum HOM05D005240 ORTHO05D006471 2.0e-53 212.6 136 72.8
MSTRG.355 Avicennia marina HOM05D005240 ORTHO05D006471 2.6e-53 212.2 138 75.4
THA.LOC104803452 Tarenaya hassleriana HOM05D005240 ORTHO05D006471 5.9e-53 211.1 136 69.9
PSO210G2142 Papaver somniferum HOM05D005240 ORTHO05D006471 2.2e-52 209.1 136 72.1
Lj8C95T7 Lonicera japonica HOM05D005240 ORTHO05D006471 3.8e-52 208.4 133 74.4
Hund19334 Selenicereus undatus HOM05D005240 ORTHO05D006471 5.0e-52 208.0 137 72.3
ECA238G3142 Erigeron canadensis HOM05D005240 ORTHO05D006471 5.5e-51 204.5 137 71.5
Glyma.10G214000 Glycine max HOM05D005240 ORTHO05D006471 5.5e-51 204.5 137 72.3
Potri.010G217500 Populus trichocarpa HOM05D005240 ORTHO05D006471 5.5e-51 204.5 136 71.3
MBI16_g46203_MAGBIO Magnolia biondii HOM05D005240 ORTHO05D006471 7.2e-51 204.1 137 70.1
Zm00001eb148920 Zea mays HOM05D005240 ORTHO05D006471 7.2e-51 204.1 138 66.7
Duzib128G0461 Durio zibethinus HOM05D005240 ORTHO05D006471 2.1e-50 202.6 137 70.8
HPP92_007585 Vanilla planifolia HOM05D005240 ORTHO05D006471 6.1e-50 201.1 136 65.4
COL.COLO4_23732 Corchorus olitorius HOM05D005240 ORTHO05D006471 7.9e-50 200.7 122 76.2
Medtr1g095900 Medicago truncatula HOM05D005240 ORTHO05D006471 7.9e-50 200.7 137 70.1
CAN.G492.51 Capsicum annuum HOM05D005240 ORTHO05D006471 1.8e-49 199.5 138 70.3
Ciclev10032844m.g Citrus clementina HOM05D005240 ORTHO05D006471 1.8e-49 199.5 117 78.6
Rhsim10G0162300 Rhododendron simsii HOM05D005240 ORTHO05D006471 1.8e-49 199.5 205 51.2
Sabra10G0168200 Salix brachista HOM05D005240 ORTHO05D006471 3.9e-49 198.4 136 70.6
Carub.0004s1759 Capsella rubella HOM05D005240 ORTHO05D006471 6.7e-49 197.6 136 65.4
AL4G31940 Arabidopsis lyrata HOM05D005240 ORTHO05D006471 1.1e-48 196.8 135 65.2
Os01g0833200 Oryza sativa ssp. japonica HOM05D005240 ORTHO05D006471 1.1e-48 196.8 140 66.4
ATR1159G086 Amborella trichopoda HOM05D005240 ORTHO05D006471 3.3e-48 195.3 147 61.2
DCAR_015276 Daucus carota HOM05D005240 ORTHO05D006471 1.7e-47 193.0 137 67.2
A04p27280 Brassica napus HOM05D005240 ORTHO05D006471 2.2e-47 192.6 135 65.2
BraA04t18226Z Brassica rapa HOM05D005240 ORTHO05D006471 2.2e-47 192.6 135 65.2
CANSAT56G3849 Cannabis sativa HOM05D005240 ORTHO05D006471 2.2e-47 192.6 138 64.5
TPR.G15475 Trifolium pratense HOM05D005240 ORTHO05D006471 3.7e-47 191.8 133 65.4
BcaB06g28877 Brassica carinata HOM05D005240 ORTHO05D006471 4.8e-47 191.4 135 67.4
SalBow3G0637 Salvia bowleyana HOM05D005240 ORTHO05D006471 6.3e-47 191.0 115 78.3
Thhalv10017274m.g Eutrema salsugineum HOM05D005240 ORTHO05D006471 1.1e-46 190.3 131 64.9
CANSAT56G2007 Cannabis sativa HOM05D005240 ORTHO05D006471 2.4e-46 189.1 139 64.0
CDE07G1884 Ceratophyllum demersum HOM05D005240 ORTHO05D006471 2.4e-46 189.1 135 65.9
Ah.16g108220 Amaranthus hybridus HOM05D005240 ORTHO05D006471 3.1e-46 188.7 149 61.1
Sp4g18090 Schrenkiella parvula HOM05D005240 ORTHO05D006471 7.0e-46 187.6 135 65.9
BcaC02g07666 Brassica carinata HOM05D005240 ORTHO05D006471 9.1e-46 187.2 135 63.0
ECA238G0657 Erigeron canadensis HOM05D005240 ORTHO05D006471 9.1e-46 187.2 130 70.0
AUR62020787 Chenopodium quinoa HOM05D005240 ORTHO05D006471 1.2e-45 186.8 149 62.4
PSO170G1537 Papaver somniferum HOM05D005240 ORTHO05D006471 1.2e-45 186.8 134 66.4
AT2G35820 Arabidopsis thaliana HOM05D005240 ORTHO05D006471 5.9e-45 184.5 134 61.9
Oeu057235.1 Olea europaea HOM05D005240 ORTHO05D006471 7.7e-45 184.1 112 75.9
AT2G35830 Arabidopsis thaliana HOM05D005240 ORTHO05D006471 1.7e-44 183.0 135 60.7
DCAR_019135 Daucus carota HOM05D005240 ORTHO05D006471 1.1e-43 180.3 132 68.2
C04p64800 Brassica napus HOM05D005240 ORTHO05D006471 4.2e-43 178.3 135 60.0
BolC4t27957H Brassica oleracea HOM05D005240 ORTHO05D006471 4.2e-43 178.3 135 60.0
PSO210G3376 Papaver somniferum HOM05D005240 ORTHO05D006471 4.2e-43 178.3 136 59.6
AT2G35810 Arabidopsis thaliana HOM05D005240 ORTHO05D006471 5.5e-43 177.9 135 59.3
AagrBONN_evm.TU.Sc2ySwM_117.2297 Anthoceros agrestis HOM05D005240 ORTHO05D006471 6.1e-42 174.5 138 60.1
CARHR130080 Cardamine hirsuta HOM05D005240 ORTHO05D006471 6.1e-42 174.5 131 62.6
AL4G31930 Arabidopsis lyrata HOM05D005240 ORTHO05D006471 2.3e-41 172.6 131 59.5
Sc09g0006770 Simmondsia chinensis HOM05D005240 ORTHO05D006471 3.9e-41 171.8 116 71.6
SGA_v2.0_scaffold122G33245 Striga asiatica HOM05D005240 ORTHO05D006471 3.9e-41 171.8 118 67.8
Mapoly0113s0026 Marchantia polymorpha HOM05D005240 ORTHO05D006471 6.7e-41 171.0 137 60.6
Sed0009768 Sechium edule HOM05D005240 ORTHO05D006471 2.0e-40 169.5 140 57.9
MELO3C023691.2 Cucumis melo HOM05D005240 ORTHO05D006471 5.7e-40 167.9 140 55.0
Pp3c27_2400 Physcomitrium patens HOM05D005240 ORTHO05D006471 5.7e-40 167.9 135 58.5
AUR62043640 Chenopodium quinoa HOM05D005240 ORTHO05D006471 2.2e-39 166.0 131 62.6
CsaV3_7G024930 Cucumis sativus L. HOM05D005240 ORTHO05D006471 4.8e-39 164.9 140 54.3
Aa31LG7G14960 Aethionema arabicum HOM05D005240 ORTHO05D006471 1.1e-38 163.7 118 66.9
PSO210G2334 Papaver somniferum HOM05D005240 ORTHO05D006471 1.6e-37 159.8 116 62.9
Aa31LG7G14930 Aethionema arabicum HOM05D005240 ORTHO05D006471 3.5e-37 158.7 134 58.2
BcaB06g28875 Brassica carinata HOM05D005240 ORTHO05D006471 2.9e-36 155.6 115 63.5
Sed0007370 Sechium edule HOM05D005240 ORTHO05D006471 6.5e-36 154.5 140 52.1
SMO330G0010 Selaginella moellendorffii HOM05D005240 ORTHO05D006471 5.5e-35 151.4 125 59.2
Haze_16935 Corylus avellana HOM05D005240 ORTHO05D006471 7.2e-35 151.0 98 73.5
SMO257G0002 Selaginella moellendorffii HOM05D005240 ORTHO05D006471 1.2e-34 150.2 125 58.4
SMO330G0050 Selaginella moellendorffii HOM05D005240 ORTHO05D006471 1.2e-34 150.2 125 59.2
CBR_g12600 Chara braunii HOM05D005240 ORTHO05D006471 1.6e-34 149.8 144 52.8
SMO147G0062 Selaginella moellendorffii HOM05D005240 ORTHO05D006471 1.6e-34 149.8 125 58.4
SMO330G0038 Selaginella moellendorffii HOM05D005240 ORTHO05D006471 1.6e-34 149.8 125 59.2
SMO330G0030 Selaginella moellendorffii HOM05D005240 ORTHO05D006471 6.1e-34 147.9 125 58.4
CARHR130090 Cardamine hirsuta HOM05D005240 ORTHO05D006471 8.0e-34 147.5 106 62.3
SMO147G0059 Selaginella moellendorffii HOM05D005240 ORTHO05D006471 1.1e-30 137.1 120 55.8
FAN01G3056 Fragaria x ananassa HOM05D005240 ORTHO05D006471 1.4e-30 136.7 89 70.8
arahy.Tifrunner.gnm1.ann1.65Y6VJ Arachis hypogaea HOM05D005240 ORTHO05D006471 1.9e-27 126.3 136 49.3
SMO330G0006 Selaginella moellendorffii HOM05D005240 ORTHO05D006471 1.2e-24 117.1 124 48.4
arahy.Tifrunner.gnm1.ann1.ZWA97R Arachis hypogaea HOM05D005240 ORTHO05D006471 2.0e-24 116.3 94 57.4
MCO11G764 Micromonas commoda HOM05D005240 ORTHO05D006471 7.5e-24 114.4 133 44.4
ClCG09G009820 Citrullus lanatus HOM05D005240 ORTHO05D006471 1.7e-23 113.2 74 63.5
Cre08.g378650 Chlamydomonas reinhardtii HOM05D005240 ORTHO05D006471 4.1e-22 108.6 135 43.0
Nitab4.5_0011688g0030 Nicotiana tabacum HOM05D005240 ORTHO05D006471 7.2e-19 97.8 117 45.3
unitig_0.g188 Utricularia gibba HOM05D005240 ORTHO05D006471 2.0e-16 89.7 46 82.6
PRCOL_00006731 Prasinoderma coloniale HOM05D005240 ORTHO05D006471 3.1e-14 82.4 147 36.7
CAN.G1302.2 Capsicum annuum HOM05D005240 ORTHO05D115732 2.3e-09 66.2 107 36.4
SMO147G0342 Selaginella moellendorffii HOM05D005240 ORTHO05D006471 2.0e-08 63.2 48 58.3


User provided reference genes

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