Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv31334 Davidia involucrata HOM05D000187 ORTHO05D005916 5.0e-238 827.4 424 100.0
Dinv11787 Davidia involucrata HOM05D000187 ORTHO05D005916 2.1e-127 459.9 452 60.6
CSS0009934 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D005916 2.6e-109 399.8 454 54.0
CSS0024672 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D005916 3.0e-102 376.3 454 52.2
GSVIVG01016299001 Vitis vinifera HOM05D000187 ORTHO05D005916 2.2e-100 370.2 451 51.0
Rhsim03G0124300 Rhododendron simsii HOM05D000187 ORTHO05D005916 1.0e-97 361.3 454 50.2
vmacro07079 Vaccinium macrocarpon HOM05D000187 ORTHO05D005916 3.8e-97 359.4 454 50.4
TAR633G0001 Trochodendron aralioides HOM05D000187 ORTHO05D005916 1.9e-96 357.1 458 49.8
CSS0010500 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D005916 3.1e-94 349.7 432 51.9
Lj1A918T46 Lonicera japonica HOM05D000187 ORTHO05D005916 3.9e-89 332.8 457 49.7
Potri.010G220700 Populus trichocarpa HOM05D000187 ORTHO05D005916 1.5e-88 330.9 453 47.0
QL08p056329 Quercus lobata HOM05D000187 ORTHO05D005916 9.5e-88 328.2 456 48.0
TAR636G0951 Trochodendron aralioides HOM05D000187 ORTHO05D005916 1.4e-86 324.3 461 46.4
Nn2g10740 Nelumbo nucifera HOM05D000187 ORTHO05D005916 6.4e-84 315.5 371 54.2
CiPaw.01G274200 Carya illinoinensis HOM05D000187 ORTHO05D005916 9.2e-83 311.6 452 46.2
Sabra08G0028000 Salix brachista HOM05D000187 ORTHO05D005916 5.1e-81 305.8 453 44.8
Actinidia38267 Actinidia chinensis HOM05D000187 ORTHO05D005916 1.1e-80 304.7 474 45.4
GSVIVG01025655001 Vitis vinifera HOM05D000187 ORTHO05D005916 9.2e-75 285.0 405 47.4
Nn2g13049 Nelumbo nucifera HOM05D000187 ORTHO05D005916 9.5e-72 275.0 460 44.1
QL07p044805 Quercus lobata HOM05D000187 ORTHO05D005916 4.7e-71 272.7 373 47.7
Actinidia03050 Actinidia chinensis HOM05D000187 ORTHO05D005916 1.2e-69 268.1 444 45.0
Manes.08G005200 Manihot esculenta HOM05D000187 ORTHO05D005916 2.6e-69 266.9 404 46.5
COL.COLO4_27046 Corchorus olitorius HOM05D000187 ORTHO05D005916 7.6e-69 265.4 405 46.2
Manes.08G004116 Manihot esculenta HOM05D000187 ORTHO05D005916 2.2e-68 263.8 404 46.0
Manes.08G004122 Manihot esculenta HOM05D000187 ORTHO05D005916 2.2e-68 263.8 404 46.0
Sabra10G0170500 Salix brachista HOM05D000187 ORTHO05D005916 1.1e-67 261.5 419 42.7
Thecc.10G071200 Theobroma cacao HOM05D000187 ORTHO05D005916 4.2e-67 259.6 463 42.3
CiPaw.09G178000 Carya illinoinensis HOM05D000187 ORTHO05D005916 7.1e-67 258.8 371 47.2
Ciclev10011412m.g Citrus clementina HOM05D000187 ORTHO05D005916 1.2e-66 258.1 404 45.0
Thecc.05G057000 Theobroma cacao HOM05D000187 ORTHO05D005916 1.2e-66 258.1 406 45.1
TWI63G0123 Tripterygium wilfordii HOM05D000187 ORTHO05D005916 1.2e-66 258.1 368 48.1
Manes.08G004106 Manihot esculenta HOM05D000187 ORTHO05D005916 1.6e-66 257.7 404 45.5
Manes.08G004121 Manihot esculenta HOM05D000187 ORTHO05D005916 2.1e-66 257.3 403 44.9
Manes.08G004128 Manihot esculenta HOM05D000187 ORTHO05D005916 2.1e-66 257.3 404 45.5
Potri.008G041201 Populus trichocarpa HOM05D000187 ORTHO05D005916 2.7e-66 256.9 426 41.3
Duzib093G0363 Durio zibethinus HOM05D000187 ORTHO05D005916 3.5e-66 256.5 405 45.2
TWI38G1582 Tripterygium wilfordii HOM05D000187 ORTHO05D005916 3.5e-66 256.5 369 46.6
Duzib106G1386 Durio zibethinus HOM05D000187 ORTHO05D005916 7.8e-66 255.4 430 41.6
Cpa.g.sc53.60 Carica papaya HOM05D000187 ORTHO05D005916 4.3e-64 249.6 367 46.0
Atru.chr12.730 Acer truncatum HOM05D000187 ORTHO05D005916 9.6e-64 248.4 375 45.9
Gohir.A09G150900 Gossypium hirsutum HOM05D000187 ORTHO05D005916 8.1e-63 245.4 404 43.8
Gohir.D09G146500 Gossypium hirsutum HOM05D000187 ORTHO05D005916 1.8e-62 244.2 403 43.4
Glyma.19G180000 Glycine max HOM05D000187 ORTHO05D005916 2.4e-62 243.8 466 40.3
Gorai.006G167700 Gossypium raimondii HOM05D000187 ORTHO05D005916 3.4e-61 240.0 403 43.4
Prupe.6G238800 Prunus persica HOM05D000187 ORTHO05D005916 9.9e-61 238.4 405 43.2
CSS0014211 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D005916 2.9e-60 236.9 405 42.5
Duzib128G0619 Durio zibethinus HOM05D000187 ORTHO05D005916 1.9e-59 234.2 406 42.6
Cc06_g03760 Coffea canephora HOM05D000187 ORTHO05D005916 1.0e-57 228.4 402 40.8
Lj2A110G55 Lonicera japonica HOM05D000187 ORTHO05D005916 3.0e-57 226.9 401 43.1
Dinv35741 Davidia involucrata HOM05D000187 ORTHO05D005916 3.9e-57 226.5 435 39.8
Actinidia13093 Actinidia chinensis HOM05D000187 ORTHO05D005916 3.3e-56 223.4 427 39.6
Atru.chr8.1885 Acer truncatum HOM05D000187 ORTHO05D005916 5.6e-56 222.6 402 40.8
MD04G1100800 Malus domestica HOM05D000187 ORTHO05D005916 1.3e-55 221.5 403 40.7
Glyma.10G051200 Glycine max HOM05D000187 ORTHO05D005916 1.1e-54 218.4 403 40.2
Nitab4.5_0008126g0010 Nicotiana tabacum HOM05D000187 ORTHO05D005916 1.4e-54 218.0 369 42.8
VMungo1383G3362 Vigna mungo HOM05D000190 ORTHO05D005916 1.8e-54 217.6 370 41.6
Glyma.03G179300 Glycine max HOM05D000187 ORTHO05D005916 3.1e-54 216.9 470 38.9
Sopen09g002400 Solanum pennellii HOM05D000187 ORTHO05D005916 6.9e-54 215.7 370 42.4
Lj1g0027469 Lotus japonicus HOM05D000187 ORTHO05D005916 9.0e-54 215.3 380 41.8
Solyc09g007530.3 Solanum lycopersicum HOM05D000187 ORTHO05D005916 9.0e-54 215.3 370 42.4
Phvul.001G176000 Phaseolus vulgaris HOM05D000187 ORTHO05D005916 1.5e-53 214.5 378 41.8
Ca_08834_v3 Cicer arietinum L. HOM05D000187 ORTHO05D005916 2.6e-53 213.8 384 42.4
MD12G1120500 Malus domestica HOM05D000187 ORTHO05D005916 3.4e-53 213.4 371 41.8
PSO384G1161 Papaver somniferum HOM05D000187 ORTHO05D005916 4.5e-53 213.0 374 42.8
VMungo0720G2148 Vigna mungo HOM05D000187 ORTHO05D005916 5.8e-53 212.6 412 38.8
Haze_20619 Corylus avellana HOM05D000187 ORTHO05D005916 1.3e-52 211.5 344 43.6
Nitab4.5_0000669g0040 Nicotiana tabacum HOM05D000187 ORTHO05D005916 1.3e-52 211.5 369 42.0
PGSC0003DMG400001775 Solanum tuberosum HOM05D000187 ORTHO05D005916 1.3e-52 211.5 370 41.6
EL10Ac7g16533 Beta vulgaris HOM05D000187 ORTHO05D005916 1.7e-52 211.1 387 41.3
PSO339G0454 Papaver somniferum HOM05D000187 ORTHO05D005916 1.1e-51 208.4 374 42.8
RcHm_v2.0_Chr3g0469341 Rosa chinensis HOM05D000187 ORTHO05D005916 1.4e-51 208.0 374 40.9
FAN05G1888 Fragaria x ananassa HOM05D000187 ORTHO05D005916 9.3e-51 205.3 371 41.5
Phvul.007G221700 Phaseolus vulgaris HOM05D000187 ORTHO05D005916 2.7e-50 203.8 412 37.6
Medtr7g100950 Medicago truncatula HOM05D000187 ORTHO05D005916 3.5e-50 203.4 374 40.9
AUR62040492 Chenopodium quinoa HOM05D000187 ORTHO05D005916 6.0e-50 202.6 405 39.3
Lalb_Chr20g0112811 Lupinus albus HOM05D000187 ORTHO05D005916 1.0e-49 201.8 461 36.7
FvH4_6g15650 Fragaria vesca HOM05D000187 ORTHO05D005916 1.8e-49 201.1 372 40.9
PGR142G2245 Punica granatum HOM05D000187 ORTHO05D005916 2.3e-49 200.7 375 41.6
Psat3g044680 Pisum sativum HOM05D000187 ORTHO05D005916 3.9e-49 199.9 379 41.4
Hund20201 Selenicereus undatus HOM05D000187 ORTHO05D005916 3.9e-49 199.9 407 39.8
FAN14G0677 Fragaria x ananassa HOM05D000187 ORTHO05D005916 6.7e-49 199.1 372 40.6
Glyma.13G138700 Glycine max HOM05D000187 ORTHO05D005916 6.7e-49 199.1 404 38.4
TWI53G0724 Tripterygium wilfordii HOM05D000187 ORTHO05D005916 6.7e-49 199.1 402 40.3
Manes.08G004902 Manihot esculenta HOM05D000187 ORTHO05D005916 8.7e-49 198.7 402 39.8
AUR62042546 Chenopodium quinoa HOM05D000187 ORTHO05D005916 1.5e-48 198.0 405 38.8
FAN02G4435 Fragaria x ananassa HOM05D000187 ORTHO05D005916 2.1e-47 194.1 370 40.5
Sc20g0005150 Simmondsia chinensis HOM05D000187 ORTHO05D005916 4.0e-46 189.9 385 39.7
Peaxi162Scf00343g00019 Petunia axillaris HOM05D000187 ORTHO05D005916 9.3e-43 178.7 335 40.0
ECA238G1542 Erigeron canadensis HOM05D000187 ORTHO05D005916 4.6e-42 176.4 423 37.4
MSTRG.5732 Avicennia marina HOM05D000187 ORTHO05D005916 6.0e-42 176.0 401 36.4
Lalb_Chr01g0018951 Lupinus albus HOM05D000187 ORTHO05D005916 6.0e-42 176.0 373 41.0
Cpa.g.sc45.53 Carica papaya HOM05D000187 ORTHO05D005916 1.1e-40 171.8 404 36.6
Manes.05G197201 Manihot esculenta HOM05D000187 ORTHO05D005916 1.5e-40 171.4 263 45.6
TPR.G18272 Trifolium pratense HOM05D000187 ORTHO05D005916 4.3e-40 169.9 412 36.4
PSO063G1315 Papaver somniferum HOM05D000187 ORTHO05D005916 5.6e-40 169.5 368 38.6
Aqoxy4G03246 Aquilegia oxysepala HOM05D000187 ORTHO05D005916 9.6e-40 168.7 421 36.1
MSTRG.19149 Avicennia marina HOM05D000187 ORTHO05D005916 2.8e-39 167.2 388 34.8
Sc02g0001880 Simmondsia chinensis HOM05D000187 ORTHO05D005916 2.8e-39 167.2 363 38.0
PSO339G2442 Papaver somniferum HOM05D000187 ORTHO05D005916 3.7e-39 166.8 366 38.5
Migut.L01674 Erythranthe guttata HOM05D000187 ORTHO05D005916 6.2e-39 166.0 369 35.0
Oeu060098.1 Olea europaea HOM05D000187 ORTHO05D005916 3.1e-38 163.7 402 34.8
vmacro08722 Vaccinium macrocarpon HOM05D000187 ORTHO05D005916 1.5e-37 161.4 369 38.2
HanXRQChr14g0457221 Helianthus annuus HOM05D000187 ORTHO05D005916 7.6e-37 159.1 430 34.0
THA.LOC104806500 Tarenaya hassleriana HOM05D000187 ORTHO05D005916 7.6e-37 159.1 404 36.9
Medtr1g066400 Medicago truncatula HOM05D000187 ORTHO05D005916 2.2e-36 157.5 457 32.8
HanXRQChr08g0219651 Helianthus annuus HOM05D000187 ORTHO05D005916 1.4e-35 154.8 363 36.9
DCAR_019118 Daucus carota HOM05D000187 ORTHO05D005916 1.9e-35 154.5 328 37.2
DCAR_006455 Daucus carota HOM05D000187 ORTHO05D005916 2.7e-34 150.6 422 35.1
Lsat_1_v5_gn_2_113620 Lactuca sativa HOM05D000187 ORTHO05D005916 1.8e-33 147.9 465 33.3
Oeu001343.2 Olea europaea HOM05D000187 ORTHO05D005916 3.9e-33 146.7 400 33.8
SGA_v2.0_scaffold126G33919 Striga asiatica HOM05D000187 ORTHO05D005916 1.1e-32 145.2 402 34.3
COL.COLO4_23706 Corchorus olitorius HOM05D000187 ORTHO05D005916 3.3e-32 143.7 361 34.3
AL4G33500 Arabidopsis lyrata HOM05D000187 ORTHO05D005916 4.3e-32 143.3 404 35.1
Actinidia05261 Actinidia chinensis HOM05D000187 ORTHO05D005916 1.3e-31 141.7 360 34.2
CARHR131660 Cardamine hirsuta HOM05D000187 ORTHO05D005916 3.7e-31 140.2 380 36.6
Eucgr.K03219 Eucalyptus grandis HOM05D000187 ORTHO05D005916 8.2e-31 139.0 382 34.8
Sp4g19460 Schrenkiella parvula HOM05D000187 ORTHO05D005916 2.6e-29 134.0 372 37.1
AT2G37150 Arabidopsis thaliana HOM05D000187 ORTHO05D005916 3.4e-29 133.7 380 34.7
Aa31LG5G22440 Aethionema arabicum HOM05D000187 ORTHO05D005916 7.7e-29 132.5 450 33.3
Ah.08g211860 Amaranthus hybridus HOM05D000187 ORTHO05D005916 5.0e-28 129.8 464 30.0
C04p65710 Brassica napus HOM05D000187 ORTHO05D005916 1.4e-27 128.3 459 31.4
Thhalv10016485m.g Eutrema salsugineum HOM05D000187 ORTHO05D005916 1.9e-27 127.9 372 35.8
BraA03t11290Z Brassica rapa HOM05D000187 ORTHO05D005916 7.2e-27 125.9 374 34.8
BraA04t18318Z Brassica rapa HOM05D000187 ORTHO05D005916 7.2e-27 125.9 458 32.1
A04p28400 Brassica napus HOM05D000187 ORTHO05D005916 2.1e-26 124.4 373 35.4
Carub.0004s1904 Capsella rubella HOM05D000187 ORTHO05D005916 2.1e-26 124.4 430 33.0
C03p24070 Brassica napus HOM05D000187 ORTHO05D005916 3.6e-26 123.6 374 34.5
BolC3t14799H Brassica oleracea HOM05D000187 ORTHO05D005916 4.6e-26 123.2 374 34.5
BcaC01g06650 Brassica carinata HOM05D000187 ORTHO05D005916 1.0e-25 122.1 390 34.9
Migut.J00432 Erythranthe guttata HOM05D000187 ORTHO05D005916 1.4e-25 121.7 412 32.3
A03p20470 Brassica napus HOM05D000187 ORTHO05D005916 3.3e-24 117.1 464 31.0
BcaC02g07546 Brassica carinata HOM05D000187 ORTHO05D005916 7.4e-24 115.9 459 30.7
BolC4t28072H Brassica oleracea HOM05D000187 ORTHO05D005916 7.4e-24 115.9 459 30.7
ECA233G0699 Erigeron canadensis HOM05D000187 ORTHO05D005916 1.4e-22 111.7 408 30.4
DCAR_014978 Daucus carota HOM05D000187 ORTHO05D005916 9.1e-22 109.0 393 31.6
BcaB06g28980 Brassica carinata HOM05D000187 ORTHO05D005916 1.3e-20 105.1 377 35.3
Lsat_1_v5_gn_6_30401 Lactuca sativa HOM05D000187 ORTHO05D005916 1.7e-20 104.8 465 30.8
SalBow3G2812 Salvia bowleyana HOM05D000187 ORTHO05D005916 8.5e-20 102.4 326 31.0
ECA233G1295 Erigeron canadensis HOM05D000187 ORTHO05D005916 5.1e-17 93.2 441 28.3
HanXRQChr02g0052101 Helianthus annuus HOM05D000187 ORTHO05D005916 4.8e-15 86.7 408 29.4
ECA248G0617 Erigeron canadensis HOM05D000187 ORTHO05D005916 6.3e-15 86.3 438 29.5
HanXRQChr13g0399681 Helianthus annuus HOM05D000187 ORTHO05D005916 5.3e-14 83.2 344 28.5
HanXRQChr11g0349931 Helianthus annuus HOM05D000187 ORTHO05D005916 5.5e-11 73.2 400 29.2
ATR0602G043 Amborella trichopoda HOM05D000187 ORTHO05D000230 9.7e-08 62.4 387 29.2


User provided reference genes

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