Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv31237 Davidia involucrata HOM05D007188 ORTHO05D009102 9.0e-90 333.6 168 100.0
Actinidia38870 Actinidia chinensis HOM05D007188 ORTHO05D009102 3.4e-65 251.9 170 75.3
CSS0007320 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 1.7e-64 249.6 169 74.6
CSS0035829 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 2.2e-64 249.2 169 74.0
TAR623G0008 Trochodendron aralioides HOM05D007188 ORTHO05D009102 1.1e-60 236.9 175 70.9
GSVIVG01016213001 Vitis vinifera HOM05D007188 ORTHO05D009102 1.5e-60 236.5 169 73.4
Prupe.2G208300 Prunus persica HOM05D007188 ORTHO05D009102 2.5e-55 219.2 146 74.0
Cc02_g10880 Coffea canephora HOM05D007188 ORTHO05D009102 2.7e-54 215.7 176 71.0
QL08p054189 Quercus lobata HOM05D007188 ORTHO05D009102 3.6e-54 215.3 152 73.0
Thecc.10G085100 Theobroma cacao HOM05D007188 ORTHO05D009102 3.6e-54 215.3 157 71.3
Nn6g35269 Nelumbo nucifera HOM05D007188 ORTHO05D009102 4.6e-54 214.9 177 65.5
CiPaw.02G171800 Carya illinoinensis HOM05D007188 ORTHO05D009102 6.1e-54 214.5 152 74.3
TWI38G2147 Tripterygium wilfordii HOM05D007188 ORTHO05D009102 1.0e-53 213.8 151 72.8
Duzib106G0123 Durio zibethinus HOM05D007188 ORTHO05D009102 2.3e-53 212.6 152 73.0
Potri.008G034900 Populus trichocarpa HOM05D007188 ORTHO05D009102 3.0e-53 212.2 152 71.7
Lsat_1_v5_gn_8_20860 Lactuca sativa HOM05D007188 ORTHO05D009102 5.1e-53 211.5 170 68.8
Cfa001805 Carpinus fangiana HOM05D007188 ORTHO05D009102 2.0e-52 209.5 182 67.6
Manes.07G133140 Manihot esculenta HOM05D007188 ORTHO05D009102 2.0e-52 209.5 154 70.1
HanXRQChr08g0218401 Helianthus annuus HOM05D007188 ORTHO05D009102 2.5e-52 209.1 147 73.5
Solyc05g055550.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 2.5e-52 209.1 170 65.3
ECA233G0714 Erigeron canadensis HOM05D007188 ORTHO05D009102 3.3e-52 208.8 168 65.5
Sabra08G0023300 Salix brachista HOM05D007188 ORTHO05D009102 1.7e-51 206.5 173 64.7
Gohir.A05G293300 Gossypium hirsutum HOM05D007188 ORTHO05D009102 2.2e-51 206.1 118 82.2
SalBow4G2327 Salvia bowleyana HOM05D007188 ORTHO05D009102 2.8e-51 205.7 177 65.5
PGSC0003DMG400023370 Solanum tuberosum HOM05D007188 ORTHO05D009102 2.8e-51 205.7 160 68.8
CANSAT56G0643 Cannabis sativa HOM05D007188 ORTHO05D009102 3.7e-51 205.3 150 71.3
Gohir.D05G294000 Gossypium hirsutum HOM05D007188 ORTHO05D009102 3.7e-51 205.3 118 82.2
Gorai.009G310600 Gossypium raimondii HOM05D007188 ORTHO05D009102 3.7e-51 205.3 118 82.2
Sopen05g034000 Solanum pennellii HOM05D007188 ORTHO05D009102 3.7e-51 205.3 170 64.7
Migut.F01952 Erythranthe guttata HOM05D007188 ORTHO05D009102 4.8e-51 204.9 175 65.7
RcHm_v2.0_Chr1g0362491 Rosa chinensis HOM05D007188 ORTHO05D009102 4.8e-51 204.9 167 63.5
Aqoxy1G01136 Aquilegia oxysepala HOM05D007188 ORTHO05D009102 6.3e-51 204.5 145 69.7
Solyc02g033060.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 6.3e-51 204.5 170 64.7
CAN.G694.38 Capsicum annuum HOM05D007188 ORTHO05D009102 8.2e-51 204.1 162 66.7
MD01G1102700 Malus domestica HOM05D007188 ORTHO05D009102 8.2e-51 204.1 156 69.9
Phvul.007G099300 Phaseolus vulgaris HOM05D007188 ORTHO05D009102 8.2e-51 204.1 141 72.3
Eucgr.G02872 Eucalyptus grandis HOM05D007188 ORTHO05D009102 6.9e-50 201.1 136 67.6
PSO063G4012 Papaver somniferum HOM05D007188 ORTHO05D009102 4.5e-49 198.4 153 64.7
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 5.9e-49 198.0 160 66.2
Glyma.20G183500 Glycine max HOM05D007188 ORTHO05D009102 5.9e-49 198.0 140 71.4
VMungo0720G2339 Vigna mungo HOM05D007188 ORTHO05D009102 6.5e-48 194.5 160 62.5
Sed0000210 Sechium edule HOM05D007188 ORTHO05D009102 8.5e-48 194.1 152 63.8
SGA_v2.0_scaffold62G21381 Striga asiatica HOM05D007188 ORTHO05D009102 1.1e-47 193.7 141 69.5
FAN01G3175 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.9e-47 193.0 167 59.3
RhsimUnG0185400 Rhododendron simsii HOM05D007188 ORTHO05D009102 2.5e-47 192.6 112 83.0
CDE09G0470 Ceratophyllum demersum HOM05D007188 ORTHO05D009102 3.2e-47 192.2 137 66.4
FAN03G0393 Fragaria x ananassa HOM05D007188 ORTHO05D009102 3.2e-47 192.2 167 60.5
Nitab4.5_0001760g0020 Nicotiana tabacum HOM05D007188 ORTHO05D009102 3.2e-47 192.2 176 61.9
arahy.Tifrunner.gnm1.ann1.3RW2WH Arachis hypogaea HOM05D007188 ORTHO05D009102 4.2e-47 191.8 118 78.8
arahy.Tifrunner.gnm1.ann1.CRM3NE Arachis hypogaea HOM05D007188 ORTHO05D009102 4.2e-47 191.8 118 78.8
FAN06G0953 Fragaria x ananassa HOM05D007188 ORTHO05D009102 7.2e-47 191.0 167 59.3
FAN06G2123 Fragaria x ananassa HOM05D007188 ORTHO05D009102 7.2e-47 191.0 167 59.3
FAN10G2630 Fragaria x ananassa HOM05D007188 ORTHO05D009102 7.2e-47 191.0 167 59.3
Atru.chr12.855 Acer truncatum HOM05D007188 ORTHO05D009102 1.2e-46 190.3 152 67.8
Nitab4.5_0000096g0330 Nicotiana tabacum HOM05D007188 ORTHO05D009102 1.6e-46 189.9 180 60.0
Rhsim09G0148000 Rhododendron simsii HOM05D007188 ORTHO05D009102 2.1e-46 189.5 112 82.1
AUR62014280 Chenopodium quinoa HOM05D007188 ORTHO05D009102 1.0e-45 187.2 174 62.1
MELO3C012404.2 Cucumis melo HOM05D007188 ORTHO05D009102 1.0e-45 187.2 133 69.9
CsaV3_5G036040 Cucumis sativus L. HOM05D007188 ORTHO05D009102 1.0e-45 187.2 157 63.1
TPR.G10293 Trifolium pratense HOM05D007188 ORTHO05D009102 1.0e-45 187.2 159 62.3
Peaxi162Scf00176g01519 Petunia axillaris HOM05D007188 ORTHO05D009102 1.8e-45 186.4 180 58.3
Lj5g0026151 Lotus japonicus HOM05D007188 ORTHO05D009102 3.0e-45 185.7 133 69.2
Medtr1g094160 Medicago truncatula HOM05D007188 ORTHO05D009102 3.0e-45 185.7 170 59.4
Ca_10538_v3 Cicer arietinum L. HOM05D007188 ORTHO05D009102 1.1e-44 183.7 148 64.2
ClCG05G021230 Citrullus lanatus HOM05D007188 ORTHO05D009102 1.1e-44 183.7 139 66.9
Sc06g0002050 Simmondsia chinensis HOM05D007188 ORTHO05D009102 2.0e-44 183.0 109 78.9
Lalb_Chr21g0313651 Lupinus albus HOM05D007188 ORTHO05D009102 1.7e-43 179.9 114 75.4
unitig_88.g27814 Utricularia gibba HOM05D007188 ORTHO05D009102 1.7e-43 179.9 134 67.2
A03p36520 Brassica napus HOM05D007188 ORTHO05D009102 2.2e-43 179.5 149 60.4
BolC3t16687H Brassica oleracea HOM05D007188 ORTHO05D009102 2.8e-43 179.1 157 59.2
Aa31LG3G3010 Aethionema arabicum HOM05D007188 ORTHO05D009102 4.8e-43 178.3 125 68.0
C03p44120 Brassica napus HOM05D007188 ORTHO05D009102 4.8e-43 178.3 159 57.9
BraA03t12819Z Brassica rapa HOM05D007188 ORTHO05D009102 6.3e-43 177.9 149 59.7
Psat6g181120 Pisum sativum HOM05D007188 ORTHO05D009102 1.8e-42 176.4 146 61.6
AL3G21760 Arabidopsis lyrata HOM05D007188 ORTHO05D009102 3.1e-42 175.6 150 60.7
Hund14950 Selenicereus undatus HOM05D007188 ORTHO05D009102 1.2e-41 173.7 156 59.6
CARHR084890 Cardamine hirsuta HOM05D007188 ORTHO05D009102 1.6e-41 173.3 133 64.7
AT3G10405 Arabidopsis thaliana HOM05D007188 ORTHO05D009102 2.0e-41 172.9 124 66.9
Glyma.10G207400 Glycine max HOM05D007188 ORTHO05D009102 3.5e-41 172.2 144 62.5
Carub.0003s0959 Capsella rubella HOM05D007188 ORTHO05D009102 1.0e-40 170.6 159 57.2
Os10g0545100 Oryza sativa ssp. japonica HOM05D007188 ORTHO05D009102 2.2e-40 169.5 117 68.4
Thhalv10021497m.g Eutrema salsugineum HOM05D007188 ORTHO05D009102 3.8e-40 168.7 136 61.0
Zm00001eb022660 Zea mays HOM05D007188 ORTHO05D009102 1.5e-39 166.8 124 69.4
COL.COLO4_36178 Corchorus olitorius HOM05D007188 ORTHO05D009102 1.9e-39 166.4 177 55.9
Sp3g08680 Schrenkiella parvula HOM05D007188 ORTHO05D009102 2.5e-39 166.0 157 55.4
THA.LOC104826897 Tarenaya hassleriana HOM05D007188 ORTHO05D009102 5.2e-37 158.3 150 56.0
Haze_16743 Corylus avellana HOM05D007188 ORTHO05D009102 4.4e-36 155.2 182 56.0
Sopen02g011440 Solanum pennellii HOM05D007188 ORTHO05D009102 7.5e-36 154.5 95 77.9
BcaC01g04184 Brassica carinata HOM05D007188 ORTHO05D009102 3.5e-33 145.6 159 50.3
FvH4_7g18710 Fragaria vesca HOM05D007188 ORTHO05D009102 7.7e-33 144.4 140 53.6
Mapoly0050s0048 Marchantia polymorpha HOM05D007188 ORTHO05D009102 1.5e-31 140.2 131 51.1
Mapoly0278s0008 Marchantia polymorpha HOM05D007188 ORTHO05D009102 1.5e-31 140.2 131 51.1
Pp3c2_18450 Physcomitrium patens HOM05D007188 ORTHO05D009102 1.5e-31 140.2 115 55.7
EL10Ac4g08743 Beta vulgaris HOM05D007188 ORTHO05D009102 2.5e-31 139.4 112 61.6
vmacro04839 Vaccinium macrocarpon HOM05D007188 ORTHO05D009102 2.0e-28 129.8 112 61.6
AagrBONN_evm.TU.Sc2ySwM_228.639 Anthoceros agrestis HOM05D007188 ORTHO05D009102 1.0e-24 117.5 148 41.2
SMO358G0267 Selaginella moellendorffii HOM05D007188 ORTHO05D009102 1.4e-18 97.1 134 39.6
FAN10G3168 Fragaria x ananassa HOM05D007188 ORTHO05D009102 7.0e-18 94.7 108 48.1
RhsimUnG0185100 Rhododendron simsii HOM05D007188 ORTHO05D009102 2.0e-17 93.2 85 61.2
Rhsim09G0147800 Rhododendron simsii HOM05D007188 ORTHO05D009102 4.5e-17 92.0 84 63.1
Ciclev10033195m.g Citrus clementina HOM05D007188 ORTHO05D009102 1.7e-16 90.1 53 81.1
PSO339G6470 Papaver somniferum HOM05D007188 ORTHO05D009102 2.8e-14 82.8 49 77.6
AUR62034156 Chenopodium quinoa HOM05D007188 ORTHO05D009102 1.4e-13 80.5 102 53.9
CBR_g28804 Chara braunii HOM05D007188 ORTHO05D009102 2.2e-11 73.2 147 30.6
MCO11G330 Micromonas commoda HOM05D007188 ORTHO05D009102 1.2e-09 67.4 105 29.5
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 5.0e-08 62.0 48 52.1
Cre10.g464650 Chlamydomonas reinhardtii HOM05D007188 ORTHO05D009102 9.5e-07 57.8 103 29.1
SEGI_08985 Sequoiadendron giganteum HOM05D007188 ORTHO05D009102 1.2e-06 57.4 54 51.9
Lalb_Chr21g0313491 Lupinus albus HOM05D007188 ORTHO05D009102 2.8e-06 56.2 28 82.1


User provided reference genes

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