Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv31232 Davidia involucrata HOM05D003976 ORTHO05D004711 0.0e+00 2082.8 1080 100.0
CSS0009675 Camellia sinensis var. sinensis HOM05D003976 ORTHO05D004711 0.0e+00 1822.8 1080 87.5
GSVIVG01016219001 Vitis vinifera HOM05D003976 ORTHO05D004711 0.0e+00 1808.5 1088 85.5
TAR633G0511 Trochodendron aralioides HOM05D003976 ORTHO05D004711 0.0e+00 1761.9 1079 84.9
TWI63G1397 Tripterygium wilfordii HOM05D003976 ORTHO05D004711 0.0e+00 1748.8 1080 83.0
Cfa001691 Carpinus fangiana HOM05D003976 ORTHO05D004711 0.0e+00 1742.2 1079 83.7
Prupe.2G208700 Prunus persica HOM05D003976 ORTHO05D004711 0.0e+00 1735.7 1080 83.1
RcHm_v2.0_Chr1g0362571 Rosa chinensis HOM05D003976 ORTHO05D004711 0.0e+00 1731.5 1080 82.8
Nn4g25176 Nelumbo nucifera HOM05D003976 ORTHO05D004711 0.0e+00 1726.5 1080 82.4
Oeu007408.1 Olea europaea HOM05D003976 ORTHO05D004711 0.0e+00 1723.4 1075 82.2
CANSAT56G1655 Cannabis sativa HOM05D003976 ORTHO05D004711 0.0e+00 1722.6 1080 82.4
Thecc.10G083800 Theobroma cacao HOM05D003976 ORTHO05D004711 0.0e+00 1719.1 1078 82.1
CiPaw.01G268500 Carya illinoinensis HOM05D003976 ORTHO05D004711 0.0e+00 1717.6 1080 82.6
Aqoxy1G01141 Aquilegia oxysepala HOM05D003976 ORTHO05D004711 0.0e+00 1714.9 1081 81.7
TWI15G0187 Tripterygium wilfordii HOM05D003976 ORTHO05D004711 0.0e+00 1713.4 1080 81.9
MD01G1103100 Malus domestica HOM05D003976 ORTHO05D004711 0.0e+00 1707.2 1080 81.9
Duzib114G0598 Durio zibethinus HOM05D003976 ORTHO05D004711 0.0e+00 1705.3 1080 81.7
FvH4_7g18760 Fragaria vesca HOM05D003976 ORTHO05D004711 0.0e+00 1701.0 1080 81.6
PGR044G0607 Punica granatum HOM05D003976 ORTHO05D004711 0.0e+00 1687.9 1078 80.1
Sopen11g004150 Solanum pennellii HOM05D003976 ORTHO05D004711 0.0e+00 1686.0 1077 80.8
Migut.F01955 Erythranthe guttata HOM05D003976 ORTHO05D004711 0.0e+00 1682.5 1080 80.0
Manes.01G054600 Manihot esculenta HOM05D003976 ORTHO05D004711 0.0e+00 1679.5 1080 81.2
FAN03G2922 Fragaria x ananassa HOM05D003976 ORTHO05D004711 0.0e+00 1678.3 1080 80.8
Solyc11g008340.3 Solanum lycopersicum HOM05D003976 ORTHO05D004711 0.0e+00 1673.3 1077 80.4
Potri.010G227100 Populus trichocarpa HOM05D003976 ORTHO05D004711 0.0e+00 1669.4 1080 80.5
Lj5g0000763 Lotus japonicus HOM05D003976 ORTHO05D004711 0.0e+00 1668.7 1078 80.2
Glyma.10G207900 Glycine max HOM05D003976 ORTHO05D004711 0.0e+00 1664.8 1078 80.1
FAN06G0006 Fragaria x ananassa HOM05D003976 ORTHO05D004711 0.0e+00 1664.4 1080 80.2
Lalb_Chr06g0170321 Lupinus albus HOM05D003976 ORTHO05D004711 0.0e+00 1655.6 1078 79.3
Potri.008G035300 Populus trichocarpa HOM05D003976 ORTHO05D004711 0.0e+00 1649.0 1080 80.0
MSTRG.27486 Avicennia marina HOM05D003976 ORTHO05D004711 0.0e+00 1647.9 1080 78.2
Lj2C20G12 Lonicera japonica HOM05D003976 ORTHO05D004711 0.0e+00 1647.5 1094 79.1
Nitab4.5_0001450g0090 Nicotiana tabacum HOM05D003976 ORTHO05D004711 0.0e+00 1645.6 1160 75.9
Atru.chr12.845 Acer truncatum HOM05D003976 ORTHO05D004711 0.0e+00 1644.4 1051 80.7
Glyma.20G182800 Glycine max HOM05D003976 ORTHO05D004711 0.0e+00 1644.4 1090 78.8
MD07G1169800 Malus domestica HOM05D003976 ORTHO05D004711 0.0e+00 1642.9 1035 81.7
Ca_00795_v3 Cicer arietinum L. HOM05D003976 ORTHO05D004711 0.0e+00 1639.8 1078 78.8
Medtr8g104855 Medicago truncatula HOM05D003976 ORTHO05D004711 0.0e+00 1632.8 1084 78.3
PSO063G6915 Papaver somniferum HOM05D003976 ORTHO05D004711 0.0e+00 1632.5 1082 78.7
Phvul.007G098800 Phaseolus vulgaris HOM05D003976 ORTHO05D004711 0.0e+00 1622.4 1078 78.8
PSO339G0981 Papaver somniferum HOM05D003976 ORTHO05D004711 0.0e+00 1620.5 1082 78.3
Sed0018764 Sechium edule HOM05D003976 ORTHO05D004711 0.0e+00 1619.4 1080 77.3
VMungo0251G3371 Vigna mungo HOM05D003976 ORTHO05D004711 0.0e+00 1613.6 1078 78.2
Medtr5g017640 Medicago truncatula HOM05D003976 ORTHO05D004711 0.0e+00 1611.7 1078 77.7
SalBow4G0398 Salvia bowleyana HOM05D003976 ORTHO05D004711 0.0e+00 1611.7 1102 76.7
Nitab4.5_0001659g0180 Nicotiana tabacum HOM05D003976 ORTHO05D004711 0.0e+00 1609.0 1101 77.5
Gohir.D04G001800 Gossypium hirsutum HOM05D003976 ORTHO05D004711 0.0e+00 1605.1 1081 77.2
Gohir.A05G414300 Gossypium hirsutum HOM05D003976 ORTHO05D004711 0.0e+00 1600.9 1080 76.9
CsaV3_6G036710 Cucumis sativus L. HOM05D003976 ORTHO05D004711 0.0e+00 1598.9 1080 76.1
TPR.G32679 Trifolium pratense HOM05D003976 ORTHO05D004711 0.0e+00 1597.4 1078 77.4
Gorai.012G002900 Gossypium raimondii HOM05D003976 ORTHO05D004711 0.0e+00 1596.3 1081 76.7
DCAR_019085 Daucus carota HOM05D003976 ORTHO05D004711 0.0e+00 1594.7 1084 77.7
Sc06g0007810 Simmondsia chinensis HOM05D003976 ORTHO05D004711 0.0e+00 1592.8 1082 77.5
THA.LOC104826898 Tarenaya hassleriana HOM05D003976 ORTHO05D004711 0.0e+00 1559.3 1080 74.8
Carub.0003s0956 Capsella rubella HOM05D003976 ORTHO05D004711 0.0e+00 1532.7 1080 73.3
ECA238G0457 Erigeron canadensis HOM05D003976 ORTHO05D004711 0.0e+00 1529.2 1077 74.4
Ciclev10030617m.g Citrus clementina HOM05D003976 ORTHO05D004711 0.0e+00 1523.5 1078 75.6
Oeu033874.1 Olea europaea HOM05D003976 ORTHO05D004711 0.0e+00 1522.3 947 82.7
AT3G10380 Arabidopsis thaliana HOM05D003976 ORTHO05D004711 0.0e+00 1515.7 1080 72.8
Sp3g08650 Schrenkiella parvula HOM05D003976 ORTHO05D004711 0.0e+00 1515.7 1081 72.8
CARHR084860 Cardamine hirsuta HOM05D003976 ORTHO05D004711 0.0e+00 1508.8 1080 72.5
MBI18_g27471_MAGBIO Magnolia biondii HOM05D003976 ORTHO05D004711 0.0e+00 1505.7 1002 78.5
MELO3C019825.2 Cucumis melo HOM05D003976 ORTHO05D004711 0.0e+00 1505.3 1093 72.2
Haze_16845 Corylus avellana HOM05D003976 ORTHO05D004711 0.0e+00 1496.9 1155 71.7
C05p57780 Brassica napus HOM05D003976 ORTHO05D004711 0.0e+00 1496.1 1097 71.5
BolC5t34435H Brassica oleracea HOM05D003976 ORTHO05D004711 0.0e+00 1495.7 1097 71.5
AL3G21710 Arabidopsis lyrata HOM05D003976 ORTHO05D004711 0.0e+00 1494.9 1080 71.9
A05p38770 Brassica napus HOM05D003976 ORTHO05D004711 0.0e+00 1491.1 1082 71.9
HanXRQChr05g0161261 Helianthus annuus HOM05D003976 ORTHO05D004711 0.0e+00 1485.3 1077 72.8
Sabra08G0023600 Salix brachista HOM05D003976 ORTHO05D004711 0.0e+00 1484.9 1128 71.7
Thhalv10019960m.g Eutrema salsugineum HOM05D003976 ORTHO05D004711 0.0e+00 1483.8 1085 71.1
Sabra10G0175200 Salix brachista HOM05D003976 ORTHO05D004711 0.0e+00 1481.5 1179 69.4
FAN01G1125 Fragaria x ananassa HOM05D003976 ORTHO05D004711 0.0e+00 1474.9 1078 73.7
HanXRQChr14g0456581 Helianthus annuus HOM05D003976 ORTHO05D004711 0.0e+00 1474.5 1077 72.4
BolC1t05404H Brassica oleracea HOM05D003976 ORTHO05D004711 0.0e+00 1474.1 1115 69.8
BraA01t04258Z Brassica rapa HOM05D003976 ORTHO05D004711 0.0e+00 1472.2 1115 69.2
C03p44100 Brassica napus HOM05D003976 ORTHO05D004711 0.0e+00 1467.2 1100 69.5
Psat7g009400 Pisum sativum HOM05D003976 ORTHO05D004711 0.0e+00 1467.2 994 76.9
BcaB04g21214 Brassica carinata HOM05D003976 ORTHO05D004711 0.0e+00 1463.7 1081 70.4
HanXRQChr14g0455711 Helianthus annuus HOM05D003976 ORTHO05D004711 0.0e+00 1463.7 1078 72.1
Nn3g18724 Nelumbo nucifera HOM05D003976 ORTHO05D004711 0.0e+00 1463.7 1080 71.5
FAN06G1302 Fragaria x ananassa HOM05D003976 ORTHO05D004711 0.0e+00 1459.5 1110 71.3
A01p41880 Brassica napus HOM05D003976 ORTHO05D004711 0.0e+00 1455.7 1068 71.1
BolC3t16685H Brassica oleracea HOM05D003976 ORTHO05D004711 0.0e+00 1439.1 1100 68.5
BcaC05g29471 Brassica carinata HOM05D003976 ORTHO05D004711 0.0e+00 1434.9 1081 69.8
BcaC09g48100 Brassica carinata HOM05D003976 ORTHO05D004711 0.0e+00 1434.1 1066 70.4
A03p36500 Brassica napus HOM05D003976 ORTHO05D004711 0.0e+00 1432.5 1100 68.5
BraA03t12817Z Brassica rapa HOM05D003976 ORTHO05D004711 0.0e+00 1412.9 1100 67.9
AUR62023345 Chenopodium quinoa HOM05D003976 ORTHO05D004711 0.0e+00 1412.1 1094 69.7
ClCG08G007720 Citrullus lanatus HOM05D003976 ORTHO05D004711 0.0e+00 1402.5 1046 71.1
AUR62013811 Chenopodium quinoa HOM05D003976 ORTHO05D004711 0.0e+00 1401.3 1117 68.3
Aa31LG3G2960 Aethionema arabicum HOM05D003976 ORTHO05D004711 0.0e+00 1398.3 1085 68.0
FAN10G1353 Fragaria x ananassa HOM05D003976 ORTHO05D004711 0.0e+00 1387.1 1066 70.6
HPP92_022853 Vanilla planifolia HOM05D003976 ORTHO05D004711 0.0e+00 1379.0 1108 66.3
Lsat_1_v5_gn_2_113061 Lactuca sativa HOM05D003976 ORTHO05D004711 0.0e+00 1378.6 1088 68.5
CDE10G1014 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 0.0e+00 1361.7 1029 70.7
FAN10G3044 Fragaria x ananassa HOM05D003976 ORTHO05D004711 0.0e+00 1358.6 1065 69.7
Os08g0318500 Oryza sativa ssp. japonica HOM05D003976 ORTHO05D004711 0.0e+00 1351.7 1080 65.9
EL10Ac1g00696 Beta vulgaris HOM05D003976 ORTHO05D004711 0.0e+00 1351.3 1181 65.2
SGA_v2.0_scaffold100G29552 Striga asiatica HOM05D003976 ORTHO05D004711 0.0e+00 1335.1 1263 60.5
Zm00001eb330040 Zea mays HOM05D003976 ORTHO05D004711 0.0e+00 1328.5 1080 65.6
SEGI_27589 Sequoiadendron giganteum HOM05D003976 ORTHO05D004711 0.0e+00 1324.7 1069 64.5
Eucgr.K02187 Eucalyptus grandis HOM05D003976 ORTHO05D004711 0.0e+00 1291.9 883 76.8
Hma1.2p1_0384F.1_g140840 Hydrangea macrophylla HOM05D003976 ORTHO05D004711 0.0e+00 1289.6 744 89.5
arahy.Tifrunner.gnm1.ann1.9SI57B Arachis hypogaea HOM05D003976 ORTHO05D004711 0.0e+00 1278.5 1071 66.3
unitig_46.g18603 Utricularia gibba HOM05D003976 ORTHO05D004711 0.0e+00 1225.3 1088 62.3
ATR0730G009 Amborella trichopoda HOM05D003976 ORTHO05D004711 0.0e+00 1199.5 908 69.1
Gohir.D10G210600 Gossypium hirsutum HOM05D003976 ORTHO05D004711 0.0e+00 1166.4 920 68.4
Gorai.011G236100 Gossypium raimondii HOM05D003976 ORTHO05D004711 0.0e+00 1088.2 983 62.6
QL08p054317 Quercus lobata HOM05D003976 ORTHO05D004711 0.0e+00 1077.0 726 78.2
Actinidia18607 Actinidia chinensis HOM05D003976 ORTHO05D004711 1.2e-304 1050.0 842 69.5
Mapoly0170s0008 Marchantia polymorpha HOM05D003976 ORTHO05D004711 1.3e-295 1020.0 1081 52.6
Pp3c16_24260 Physcomitrium patens HOM05D003976 ORTHO05D004711 8.1e-293 1010.7 1098 51.9
CiPaw.02G172200 Carya illinoinensis HOM05D003976 ORTHO05D004711 1.4e-289 1000.0 634 82.5
Pp3c3_21120 Physcomitrium patens HOM05D003976 ORTHO05D004711 6.9e-268 927.9 1092 48.4
Pp3c12_15420 Physcomitrium patens HOM05D003976 ORTHO05D004711 2.8e-261 906.0 1077 47.8
Gohir.A10G202400 Gossypium hirsutum HOM05D003976 ORTHO05D004711 1.0e-255 887.5 779 64.6
SMO172G0221 Selaginella moellendorffii HOM05D003976 ORTHO05D004711 3.3e-246 855.9 1066 46.2
Peaxi162Scf00145g01215 Petunia axillaris HOM05D003976 ORTHO05D004711 8.0e-232 808.1 515 80.2
Peaxi162Scf00145g01214 Petunia axillaris HOM05D003976 ORTHO05D004711 8.5e-226 788.1 566 74.4
COL.COLO4_34215 Corchorus olitorius HOM05D003976 ORTHO05D004711 3.2e-225 786.2 572 73.8
BraA05t22668Z Brassica rapa HOM05D003976 ORTHO05D004711 1.1e-220 771.2 566 71.2
vmacro00386 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 1.2e-216 757.7 842 54.6
Hund17145 Selenicereus undatus HOM05D003976 ORTHO05D004711 9.8e-214 748.0 708 59.6
arahy.Tifrunner.gnm1.ann1.WBL645 Arachis hypogaea HOM05D003976 ORTHO05D004711 5.6e-209 732.3 587 68.5
COL.COLO4_34214 Corchorus olitorius HOM05D003976 ORTHO05D004711 3.2e-204 716.5 535 72.0
AagrBONN_evm.TU.Sc2ySwM_228.4637 Anthoceros agrestis HOM05D003976 ORTHO05D004711 6.8e-191 672.2 807 48.8
CBR_g30687 Chara braunii HOM05D003976 ORTHO05D004711 2.3e-186 657.1 1241 36.4
CAN.G321.62 Capsicum annuum HOM05D003976 ORTHO05D004711 3.4e-174 616.7 402 79.1
BraA05t22669Z Brassica rapa HOM05D003976 ORTHO05D004711 1.3e-173 614.8 432 73.6
CiPaw.02G172100 Carya illinoinensis HOM05D003976 ORTHO05D004711 8.1e-160 568.9 376 79.8
Lalb_Chr21g0313681 Lupinus albus HOM05D003976 ORTHO05D004711 3.9e-146 523.5 351 77.8
Rhsim03G0115800 Rhododendron simsii HOM05D003976 ORTHO05D004711 6.3e-144 516.2 359 76.6
CDE10G0060 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 1.5e-137 495.0 394 66.2
vmacro00383 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 1.8e-135 488.0 366 73.0
Cpa.g.sc53.134 Carica papaya HOM05D003976 ORTHO05D004711 1.8e-127 461.5 350 70.6
Cpa.g.sc53.132 Carica papaya HOM05D003976 ORTHO05D004711 7.7e-126 456.1 323 75.2
QL08p054329 Quercus lobata HOM05D003976 ORTHO05D004711 5.0e-117 426.8 273 82.8
Lalb_Chr21g0313551 Lupinus albus HOM05D003976 ORTHO05D004711 6.8e-114 416.4 285 76.5
CDE10G0443 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 6.6e-101 373.2 371 56.1
Cc02_g10920 Coffea canephora HOM05D003976 ORTHO05D004711 6.6e-93 346.7 228 78.1
BcaNung07314 Brassica carinata HOM05D003976 ORTHO05D004711 3.1e-74 284.6 178 78.7
VMungo0720G2709 Vigna mungo HOM05D003976 ORTHO05D004711 3.0e-69 268.1 194 74.7
HPP92_026132 Vanilla planifolia HOM05D003976 ORTHO05D004711 1.3e-61 242.7 143 81.8
CDE10G0301 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 3.9e-61 241.1 162 77.2
ATR0730G060 Amborella trichopoda HOM05D003976 ORTHO05D004711 9.6e-60 236.5 139 84.2
PSO478G0690 Papaver somniferum HOM05D003976 ORTHO05D004711 8.7e-53 213.4 131 84.0
vmacro00384 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 1.5e-52 212.6 108 96.3
SEGI_25267 Sequoiadendron giganteum HOM05D003976 ORTHO05D004711 1.3e-48 199.5 129 74.4
CAN.G796.1 Capsicum annuum HOM05D003976 ORTHO05D004711 7.4e-44 183.7 181 55.8
TPR.G33031 Trifolium pratense HOM05D003976 ORTHO05D004711 2.9e-40 171.8 115 73.0
Lsat_1_v5_gn_4_4660 Lactuca sativa HOM05D003976 ORTHO05D004711 1.4e-39 169.5 169 56.8
vmacro00385 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 4.2e-39 167.9 96 88.5
Actinidia18608 Actinidia chinensis HOM05D003976 ORTHO05D004711 3.9e-37 161.4 85 89.4
AL491U10010 Arabidopsis lyrata HOM05D003976 ORTHO05D004711 2.2e-35 155.6 103 73.8
Cc02_g10910 Coffea canephora HOM05D003976 ORTHO05D004711 3.7e-35 154.8 111 74.8
Psat7g009440 Pisum sativum HOM05D003976 ORTHO05D004711 6.5e-32 144.1 86 75.6
Lj6g0023100 Lotus japonicus HOM05D003976 ORTHO05D004711 7.2e-31 140.6 103 69.9
Gohir.D10G210566 Gossypium hirsutum HOM05D003976 ORTHO05D004711 1.6e-30 139.4 87 75.9
SHI08886 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-29 135.6 92 77.2
SHI08885 Sapria himalayana HOM05D000002 ORTHO05D000001 5.1e-29 134.4 79 79.7
Hma1.2p1_0384F.1_g140740 Hydrangea macrophylla HOM05D003976 ORTHO05D004711 6.7e-29 134.0 87 82.8
Lsat_1_v5_gn_9_29220 Lactuca sativa HOM05D003976 ORTHO05D006024 7.4e-28 130.6 86 75.6
Cre01.g003050 Chlamydomonas reinhardtii HOM05D003976 ORTHO05D004711 1.8e-26 125.9 203 33.5
TPR.G28835 Trifolium pratense HOM05D003976 ORTHO05D004711 6.9e-26 124.0 79 70.9
Cc06_g17220 Coffea canephora HOM05D003976 ORTHO05D004711 6.1e-22 110.9 81 64.2
Prupe.5G231200 Prunus persica HOM05D003976 ORTHO05D004711 3.3e-20 105.1 100 57.0
Lalb_Chr21g0313561 Lupinus albus HOM05D003976 ORTHO05D004711 6.3e-19 100.9 84 65.5
Lalb_Chr21g0313691 Lupinus albus HOM05D003976 ORTHO05D004711 6.3e-19 100.9 84 65.5
Lsat_1_v5_gn_6_63420 Lactuca sativa HOM05D003976 ORTHO05D004711 3.8e-16 91.7 71 64.8
vmacro16680 Vaccinium macrocarpon HOM05D002957 ORTHO05D007941 1.1e-15 90.1 62 72.6
vmacro23142 Vaccinium macrocarpon HOM05D002957 ORTHO05D007941 1.1e-15 90.1 62 72.6
Hma1.2p1_0384F.1_g140760 Hydrangea macrophylla HOM05D003976 ORTHO05D004711 1.6e-14 86.3 49 85.7
TPR.G6473 Trifolium pratense HOM05D003976 ORTHO05D004711 4.8e-11 74.7 48 79.2
Cc03_g09730 Coffea canephora HOM05D003976 ORTHO05D004711 1.4e-10 73.2 56 66.1
Aa31LG6G7350 Aethionema arabicum HOM05D003976 ORTHO05D004711 2.4e-10 72.4 53 67.9
HanXRQChr05g0134171 Helianthus annuus HOM05D003976 ORTHO05D004711 2.0e-09 69.3 52 71.2
MBI18_g27470_MAGBIO Magnolia biondii HOM05D003976 ORTHO05D004711 1.1e-07 63.5 52 53.8


User provided reference genes

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