Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv31190 Davidia involucrata HOM05D000117 ORTHO05D182872 5.2e-34 147.1 73 100.0
Dinv22482 Davidia involucrata HOM05D000117 ORTHO05D000070 5.2e-10 67.4 37 81.1
CSS0019669 Camellia sinensis var. sinensis HOM05D000117 ORTHO05D000070 1.7e-08 62.4 39 69.2
QL12p042664 Quercus lobata HOM05D000117 ORTHO05D000070 2.2e-08 62.0 35 80.0
CSS0019320 Camellia sinensis var. sinensis HOM05D000117 ORTHO05D000070 4.9e-08 60.8 36 75.0
GSVIVG01021779001 Vitis vinifera HOM05D000117 ORTHO05D000070 4.9e-08 60.8 35 74.3
Lj2A1160G33 Lonicera japonica HOM05D000117 ORTHO05D000070 8.3e-08 60.1 35 74.3
Actinidia19982 Actinidia chinensis HOM05D000117 ORTHO05D000070 1.4e-07 59.3 37 70.3
Duzib128G1623 Durio zibethinus HOM05D000117 ORTHO05D000070 1.9e-07 58.9 36 72.2
Actinidia21154 Actinidia chinensis HOM05D000117 ORTHO05D000070 2.4e-07 58.5 37 70.3
CiPaw.03G257200 Carya illinoinensis HOM05D000117 ORTHO05D000070 2.4e-07 58.5 36 80.6
Duzib177G0133 Durio zibethinus HOM05D000117 ORTHO05D000070 2.4e-07 58.5 36 72.2
QL03p027019 Quercus lobata HOM05D000117 ORTHO05D000070 2.4e-07 58.5 36 72.2
Nn3g19508 Nelumbo nucifera HOM05D000117 ORTHO05D000070 3.2e-07 58.2 36 72.2
Thecc.05G283100 Theobroma cacao HOM05D000117 ORTHO05D000070 3.2e-07 58.2 36 72.2
FAN02G1548 Fragaria x ananassa HOM05D000117 ORTHO05D000070 4.1e-07 57.8 36 69.4
FAN09G2874 Fragaria x ananassa HOM05D004252 ORTHO05D005101 4.1e-07 57.8 36 69.4
FAN14G0679 Fragaria x ananassa HOM05D000117 ORTHO05D000070 4.1e-07 57.8 36 69.4
Peaxi162Scf00578g00523 Petunia axillaris HOM05D000117 ORTHO05D000070 4.1e-07 57.8 57 52.6
RcHm_v2.0_Chr3g0451081 Rosa chinensis HOM05D000117 ORTHO05D000070 4.1e-07 57.8 36 69.4
vmacro14874 Vaccinium macrocarpon HOM05D000117 ORTHO05D000070 5.4e-07 57.4 37 67.6
CiPaw.08G123200 Carya illinoinensis HOM05D000117 ORTHO05D000070 7.0e-07 57.0 36 72.2
COL.COLO4_15352 Corchorus olitorius HOM05D000117 ORTHO05D000070 7.0e-07 57.0 36 69.4
Dinv34567 Davidia involucrata HOM05D000117 ORTHO05D000070 7.0e-07 57.0 41 70.7
MD04G1225000 Malus domestica HOM05D000117 ORTHO05D000070 7.0e-07 57.0 36 66.7
Rhsim13G0031000 Rhododendron simsii HOM05D000117 ORTHO05D000070 7.0e-07 57.0 37 67.6
GSVIVG01000720001 Vitis vinifera HOM05D000117 ORTHO05D000070 7.0e-07 57.0 35 74.3
Actinidia24934 Actinidia chinensis HOM05D000117 ORTHO05D000070 9.2e-07 56.6 37 67.6
FvH4_6g02870 Fragaria vesca HOM05D000117 ORTHO05D000070 9.2e-07 56.6 36 66.7
FAN05G3550 Fragaria x ananassa HOM05D000117 ORTHO05D000070 9.2e-07 56.6 36 66.7
Actinidia30709 Actinidia chinensis HOM05D000117 ORTHO05D000070 1.2e-06 56.2 37 67.6
MD12G1241700 Malus domestica HOM05D000117 ORTHO05D000070 1.2e-06 56.2 35 68.6
Potri.013G041300 Populus trichocarpa HOM05D000117 ORTHO05D000070 1.2e-06 56.2 36 69.4
Sabra13G0038100 Salix brachista HOM05D000117 ORTHO05D000070 1.2e-06 56.2 36 69.4
GSVIVG01018099001 Vitis vinifera HOM05D000117 ORTHO05D000070 1.2e-06 56.2 34 76.5
Oeu025790.1 Olea europaea HOM05D000117 ORTHO05D000070 1.6e-06 55.8 33 78.8
EL10Ac5g10473 Beta vulgaris HOM05D000117 ORTHO05D000070 2.0e-06 55.5 34 73.5
Haze_04357 Corylus avellana HOM05D000117 ORTHO05D000070 2.0e-06 55.5 35 71.4
Rhsim01G0269900 Rhododendron simsii HOM05D000117 ORTHO05D000070 2.0e-06 55.5 37 64.9
Potri.005G053800 Populus trichocarpa HOM05D000117 ORTHO05D000070 2.7e-06 55.1 36 66.7
Potri.005G218200 Populus trichocarpa HOM05D000117 ORTHO05D000070 2.7e-06 55.1 38 71.1
CiPaw.04G181800 Carya illinoinensis HOM05D000117 ORTHO05D000070 3.5e-06 54.7 37 78.4
DCAR_027268 Daucus carota HOM05D000117 ORTHO05D000070 3.5e-06 54.7 36 69.4
Gohir.A11G248300 Gossypium hirsutum HOM05D000117 ORTHO05D000070 3.5e-06 54.7 33 75.8
Hma1.2p1_0172F.1_g076210 Hydrangea macrophylla HOM05D000117 ORTHO05D000070 3.5e-06 54.7 38 68.4
CiPaw.07G067800 Carya illinoinensis HOM05D000117 ORTHO05D000070 4.6e-06 54.3 36 63.9
DCAR_024202 Daucus carota HOM05D000117 ORTHO05D000070 4.6e-06 54.3 36 69.4
Gohir.D11G258700 Gossypium hirsutum HOM05D000117 ORTHO05D000070 4.6e-06 54.3 33 75.8
Gorai.007G277000 Gossypium raimondii HOM05D000117 ORTHO05D000070 4.6e-06 54.3 33 75.8
HanXRQChr12g0381161 Helianthus annuus HOM05D000117 ORTHO05D000070 4.6e-06 54.3 34 76.5
Lj1A57T52 Lonicera japonica HOM05D000117 ORTHO05D000070 4.6e-06 54.3 33 75.8
Prupe.6G343700 Prunus persica HOM05D000117 ORTHO05D000070 4.6e-06 54.3 36 61.1
PGR004G2873 Punica granatum HOM05D000117 ORTHO05D000070 4.6e-06 54.3 36 61.1
Cfa002324 Carpinus fangiana HOM05D000117 ORTHO05D000070 6.0e-06 53.9 36 72.2
Haze_24529 Corylus avellana HOM05D000117 ORTHO05D000070 6.0e-06 53.9 36 72.2
Manes.05G084200 Manihot esculenta HOM05D000117 ORTHO05D000070 6.0e-06 53.9 37 64.9
Nn1g02562 Nelumbo nucifera HOM05D000117 ORTHO05D000070 6.0e-06 53.9 34 73.5
Potri.002G045000 Populus trichocarpa HOM05D000117 ORTHO05D000070 6.0e-06 53.9 38 68.4
Sabra02G0036100 Salix brachista HOM05D000117 ORTHO05D000070 6.0e-06 53.9 38 68.4
TAR383G0348 Trochodendron aralioides HOM05D000117 ORTHO05D000070 6.0e-06 53.9 33 75.8
Actinidia09091 Actinidia chinensis HOM05D000117 ORTHO05D000070 7.8e-06 53.5 37 62.2
Sabra05G0167300 Salix brachista HOM05D000117 ORTHO05D000070 7.8e-06 53.5 38 68.4
Thecc.01G267700 Theobroma cacao HOM05D000117 ORTHO05D000070 7.8e-06 53.5 37 62.2
Thecc.04G244400 Theobroma cacao HOM05D000117 ORTHO05D000070 7.8e-06 53.5 33 72.7


User provided reference genes

Program Settings