Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv31024 Davidia involucrata HOM05D000021 ORTHO05D000010 5.6e-59 230.7 114 100.0
Dinv22760 Davidia involucrata HOM05D000021 ORTHO05D000010 8.3e-55 216.9 106 100.0
Dinv31078 Davidia involucrata HOM05D000021 ORTHO05D000010 8.3e-55 216.9 106 100.0
Dinv25277 Davidia involucrata HOM05D000077 ORTHO05D001453 1.0e-44 183.3 93 95.7
Dinv41346 Davidia involucrata HOM05D000021 ORTHO05D000010 1.1e-35 153.3 82 90.2
Peaxi162Scf01313g00234 Petunia axillaris HOM05D000021 ORTHO05D000010 2.9e-23 112.1 78 65.4
Cpa.g.sc46.193 Carica papaya HOM05D000021 ORTHO05D000010 4.2e-22 108.2 77 66.2
TAR625G1270 Trochodendron aralioides HOM05D000021 ORTHO05D000010 9.3e-22 107.1 78 66.7
Gohir.A04G048500 Gossypium hirsutum HOM05D000021 ORTHO05D000010 1.6e-21 106.3 88 61.4
Gohir.D04G088400 Gossypium hirsutum HOM05D000021 ORTHO05D000010 2.1e-21 105.9 84 61.9
Gorai.012G098700 Gossypium raimondii HOM05D000021 ORTHO05D000010 2.1e-21 105.9 84 61.9
Ciclev10010652m.g Citrus clementina HOM05D000021 ORTHO05D000010 2.7e-21 105.5 78 62.8
Manes.06G031500 Manihot esculenta HOM05D000021 ORTHO05D000010 3.5e-21 105.1 72 66.7
Rhsim03G0259000 Rhododendron simsii HOM05D000021 ORTHO05D000010 4.6e-21 104.8 79 67.1
Atru.chr7.317 Acer truncatum HOM05D000021 ORTHO05D000010 7.8e-21 104.0 78 67.9
CANSAT11G0242 Cannabis sativa HOM05D000021 ORTHO05D000010 7.8e-21 104.0 77 63.6
vmacro06056 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 1.0e-20 103.6 85 62.4
Duzib168G0325 Durio zibethinus HOM05D000021 ORTHO05D000010 1.3e-20 103.2 82 62.2
GSVIVG01023658001 Vitis vinifera HOM05D000021 ORTHO05D000010 1.7e-20 102.8 75 66.7
QL02p094033 Quercus lobata HOM05D000021 ORTHO05D000010 2.3e-20 102.4 74 64.9
Potri.006G181200 Populus trichocarpa HOM05D000021 ORTHO05D000010 6.6e-20 100.9 82 61.0
TWI34G1076 Tripterygium wilfordii HOM05D000021 ORTHO05D000010 6.6e-20 100.9 78 62.8
COL.COLO4_23937 Corchorus olitorius HOM05D000021 ORTHO05D000010 8.7e-20 100.5 78 62.8
CSS0044408 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 2.5e-19 99.0 87 58.6
DCAR_019417 Daucus carota HOM05D000021 ORTHO05D000010 5.6e-19 97.8 68 64.7
DCAR_019418 Daucus carota HOM05D000021 ORTHO05D000010 5.6e-19 97.8 68 64.7
Haze_19149 Corylus avellana HOM05D000021 ORTHO05D000010 9.6e-19 97.1 64 71.9
Manes.14G142300 Manihot esculenta HOM05D000021 ORTHO05D000010 9.6e-19 97.1 74 62.2
QL02p094008 Quercus lobata HOM05D000021 ORTHO05D000010 9.6e-19 97.1 79 64.6
Sp4g03080 Schrenkiella parvula HOM05D000021 ORTHO05D000010 9.6e-19 97.1 83 54.2
QL02p094055 Quercus lobata HOM05D000021 ORTHO05D000010 1.3e-18 96.7 79 64.6
BcaC07g40957 Brassica carinata HOM05D000021 ORTHO05D000010 1.6e-18 96.3 73 60.3
BolC8t51523H Brassica oleracea HOM05D000021 ORTHO05D000010 1.6e-18 96.3 73 60.3
Cc06_g14560 Coffea canephora HOM05D000021 ORTHO05D000010 1.6e-18 96.3 76 61.8
MD02G1004900 Malus domestica HOM05D000021 ORTHO05D000010 2.1e-18 95.9 78 57.7
Sc18g0003080 Simmondsia chinensis HOM05D000021 ORTHO05D000010 2.1e-18 95.9 80 53.8
A09p56550 Brassica napus HOM05D000021 ORTHO05D000010 2.8e-18 95.5 73 58.9
BraA09t41045Z Brassica rapa HOM05D000021 ORTHO05D000010 2.8e-18 95.5 73 58.9
Prupe.7G266100 Prunus persica HOM05D000021 ORTHO05D000010 3.6e-18 95.1 78 57.7
Thecc.09G153100 Theobroma cacao HOM05D000021 ORTHO05D000010 3.6e-18 95.1 77 59.7
Actinidia33299 Actinidia chinensis HOM05D000021 ORTHO05D000010 4.8e-18 94.7 80 58.8
C08p39490 Brassica napus HOM05D000021 ORTHO05D000010 4.8e-18 94.7 73 58.9
FvH4_1g00610 Fragaria vesca HOM05D000021 ORTHO05D000010 4.8e-18 94.7 79 59.5
FAN28G0968 Fragaria x ananassa HOM05D000021 ORTHO05D000010 4.8e-18 94.7 79 59.5
Oeu021340.1 Olea europaea HOM05D000021 ORTHO05D000010 4.8e-18 94.7 74 63.5
Nitab4.5_0010072g0010 Nicotiana tabacum HOM05D000021 ORTHO05D000010 6.2e-18 94.4 78 53.8
Potri.018G103400 Populus trichocarpa HOM05D000021 ORTHO05D000010 8.1e-18 94.0 73 61.6
RcHm_v2.0_Chr2g0085231 Rosa chinensis HOM05D000021 ORTHO05D000010 1.1e-17 93.6 79 57.0
Nitab4.5_0010667g0010 Nicotiana tabacum HOM05D000021 ORTHO05D000010 1.4e-17 93.2 74 55.4
AL4G14250 Arabidopsis lyrata HOM05D000021 ORTHO05D000010 1.8e-17 92.8 73 57.5
Migut.J01386 Erythranthe guttata HOM05D000021 ORTHO05D000010 1.8e-17 92.8 76 60.5
AT2G24130 Arabidopsis thaliana HOM05D000021 ORTHO05D000010 2.4e-17 92.4 73 58.9
Nn8g40011 Nelumbo nucifera HOM05D000021 ORTHO05D000010 4.0e-17 91.7 81 54.3
Aqoxy7G03350 Aquilegia oxysepala HOM05D000021 ORTHO05D000010 6.9e-17 90.9 72 62.5
Carub.0004s0331 Capsella rubella HOM05D000021 ORTHO05D000010 9.0e-17 90.5 73 54.8
FAN26G3391 Fragaria x ananassa HOM05D000021 ORTHO05D000010 9.0e-17 90.5 74 55.4
MD15G1148900 Malus domestica HOM05D000021 ORTHO05D000010 9.0e-17 90.5 78 52.6
PGR142G3018 Punica granatum HOM05D000021 ORTHO05D000010 1.2e-16 90.1 77 57.1
Sabra06G0138100 Salix brachista HOM05D000021 ORTHO05D000010 1.2e-16 90.1 85 51.8
THA.LOC104803552 Tarenaya hassleriana HOM05D000021 ORTHO05D000010 2.0e-16 89.4 80 51.2
Lsat_1_v5_gn_7_49561 Lactuca sativa HOM05D000021 ORTHO05D000010 4.5e-16 88.2 75 58.7
Lalb_Chr13g0300711 Lupinus albus HOM05D000021 ORTHO05D000010 9.9e-16 87.0 77 54.5
MBI14_g08690_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 9.9e-16 87.0 64 60.9
AUR62028360 Chenopodium quinoa HOM05D000021 ORTHO05D000010 1.3e-15 86.7 79 57.0
PGSC0003DMG400011205 Solanum tuberosum HOM05D000021 ORTHO05D000010 1.7e-15 86.3 82 51.2
CAN.G1610.4 Capsicum annuum HOM05D000021 ORTHO05D000010 2.2e-15 85.9 77 53.2
CiPaw.15G165100 Carya illinoinensis HOM05D000021 ORTHO05D000010 2.2e-15 85.9 81 53.1
Eucgr.C00242 Eucalyptus grandis HOM05D000021 ORTHO05D000010 2.2e-15 85.9 82 53.7
Thhalv10000545m.g Eutrema salsugineum HOM05D000021 ORTHO05D000010 2.2e-15 85.9 68 55.9
CARHR118160 Cardamine hirsuta HOM05D000021 ORTHO05D000010 2.9e-15 85.5 66 57.6
EL10Ac8g18920 Beta vulgaris HOM05D000021 ORTHO05D000010 3.8e-15 85.1 79 58.2
ClCG06G012590 Citrullus lanatus HOM05D000021 ORTHO05D000010 3.8e-15 85.1 81 59.3
Glyma.02G206300 Glycine max HOM05D000021 ORTHO05D000010 6.4e-15 84.3 69 56.5
Solyc07g005920.3 Solanum lycopersicum HOM05D000021 ORTHO05D000010 6.4e-15 84.3 82 51.2
AUR62025359 Chenopodium quinoa HOM05D000021 ORTHO05D000010 8.4e-15 84.0 79 54.4
ECA240G1447 Erigeron canadensis HOM05D000021 ORTHO05D000010 8.4e-15 84.0 71 56.3
Nn8g40028 Nelumbo nucifera HOM05D000021 ORTHO05D000010 8.4e-15 84.0 67 58.2
Oeu055279.1 Olea europaea HOM05D000021 ORTHO05D000010 8.4e-15 84.0 68 60.3
Aa31LG7G12640 Aethionema arabicum HOM05D000021 ORTHO05D000010 1.1e-14 83.6 68 54.4
Oeu054259.1 Olea europaea HOM05D000021 ORTHO05D000010 1.4e-14 83.2 59 66.1
Medtr4g130390 Medicago truncatula HOM05D000021 ORTHO05D000010 2.4e-14 82.4 65 60.0
Sopen07g002050 Solanum pennellii HOM05D000021 ORTHO05D000010 3.2e-14 82.0 82 50.0
Actinidia38662 Actinidia chinensis HOM05D000021 ORTHO05D000010 4.2e-14 81.6 64 57.8
Lj4g0000575 Lotus japonicus HOM05D000021 ORTHO05D000010 4.2e-14 81.6 67 56.7
Eucgr.L01784 Eucalyptus grandis HOM05D000021 ORTHO05D000010 5.4e-14 81.3 72 55.6
Ah.14g084490 Amaranthus hybridus HOM05D000021 ORTHO05D000010 9.3e-14 80.5 77 54.5
Nn2g12446 Nelumbo nucifera HOM05D000021 ORTHO05D000010 1.2e-13 80.1 65 61.5
Sed0003662 Sechium edule HOM05D000021 ORTHO05D000010 1.2e-13 80.1 63 57.1
SalBow1G7214 Salvia bowleyana HOM05D000021 ORTHO05D000010 2.1e-13 79.3 73 53.4
Sed0002643 Sechium edule HOM05D000021 ORTHO05D000010 2.7e-13 79.0 74 54.1
MELO3C010204.2 Cucumis melo HOM05D000021 ORTHO05D000010 4.6e-13 78.2 78 51.3
Psat7g006680 Pisum sativum HOM05D000021 ORTHO05D000010 7.9e-13 77.4 69 53.6
Sabra18G0088900 Salix brachista HOM05D000021 ORTHO05D000010 7.9e-13 77.4 62 66.1
TPR.G24860 Trifolium pratense HOM05D000021 ORTHO05D000010 1.0e-12 77.0 67 55.2
Phvul.003G154000 Phaseolus vulgaris HOM05D000021 ORTHO05D000010 1.3e-12 76.6 65 56.9
Glyma.17G071700 Glycine max HOM05D000021 ORTHO05D000010 2.3e-12 75.9 69 52.2
arahy.Tifrunner.gnm1.ann1.85X2JL Arachis hypogaea HOM05D000021 ORTHO05D000010 3.0e-12 75.5 82 46.3
arahy.Tifrunner.gnm1.ann1.PLU1NP Arachis hypogaea HOM05D000021 ORTHO05D000010 6.7e-12 74.3 82 46.3
Ca_21151_v3 Cicer arietinum L. HOM05D000021 ORTHO05D000010 8.7e-12 73.9 65 56.9
MELO3C010203.2 Cucumis melo HOM05D000021 ORTHO05D000010 1.5e-11 73.2 70 47.1
ClCG06G012600 Citrullus lanatus HOM05D000021 ORTHO05D000010 1.9e-11 72.8 70 45.7
VMungo1215G1948 Vigna mungo HOM05D000021 ORTHO05D000010 3.3e-11 72.0 65 50.8
HanXRQChr03g0066091 Helianthus annuus HOM05D000021 ORTHO05D000010 4.3e-11 71.6 68 51.5
CsaV3_1G029150 Cucumis sativus L. HOM05D000021 ORTHO05D000010 7.4e-11 70.9 70 44.3
Duzib235G0169 Durio zibethinus HOM05D000021 ORTHO05D000010 1.8e-09 66.2 65 49.2
CANSAT78G2388 Cannabis sativa HOM05D000021 ORTHO05D000010 4.0e-09 65.1 69 47.8
HPP92_015872 Vanilla planifolia HOM05D000021 ORTHO05D000010 5.3e-09 64.7 46 60.9
TWI12G0143 Tripterygium wilfordii HOM05D000021 ORTHO05D000010 6.9e-09 64.3 69 46.4
Duzib235G0901 Durio zibethinus HOM05D000021 ORTHO05D000010 1.5e-08 63.2 69 44.9
COL.COLO4_26763 Corchorus olitorius HOM05D000021 ORTHO05D000010 2.0e-08 62.8 66 47.0
Nn8g40010 Nelumbo nucifera HOM05D000021 ORTHO05D000010 2.0e-08 62.8 69 46.4
TAR383G0089 Trochodendron aralioides HOM05D000021 ORTHO05D000010 2.0e-08 62.8 68 45.6
Glyma.13G371200 Glycine max HOM05D000021 ORTHO05D000010 2.6e-08 62.4 65 47.7
PSO782G0066 Papaver somniferum HOM05D000021 ORTHO05D000010 2.6e-08 62.4 66 42.4
TAR626G0468 Trochodendron aralioides HOM05D000021 ORTHO05D000010 2.6e-08 62.4 66 50.0
VMungo1080G1624 Vigna mungo HOM05D000021 ORTHO05D000010 2.6e-08 62.4 69 47.8
Aqoxy7G02388 Aquilegia oxysepala HOM05D000021 ORTHO05D000010 3.4e-08 62.0 68 45.6
Duzib192G0383 Durio zibethinus HOM05D000021 ORTHO05D000010 3.4e-08 62.0 88 35.2
PSO063G6469 Papaver somniferum HOM05D000021 ORTHO05D000010 3.4e-08 62.0 66 40.9
Phvul.005G183300 Phaseolus vulgaris HOM05D000021 ORTHO05D000010 4.5e-08 61.6 69 47.8
Duzib235G0178 Durio zibethinus HOM05D000021 ORTHO05D000010 5.8e-08 61.2 69 43.5
Thecc.06G045500 Theobroma cacao HOM05D000021 ORTHO05D000010 5.8e-08 61.2 65 46.2
MELO3C026730.2 Cucumis melo HOM05D000021 ORTHO05D000010 9.9e-08 60.5 65 47.7
Lj9A491G79 Lonicera japonica HOM05D000021 ORTHO05D000010 1.3e-07 60.1 68 42.6
Lj9C720T6 Lonicera japonica HOM05D000021 ORTHO05D000010 1.3e-07 60.1 52 48.1
Zm00001eb374500 Zea mays HOM05D000021 ORTHO05D000010 1.3e-07 60.1 58 48.3
ATR0739G102 Amborella trichopoda HOM05D000021 ORTHO05D000010 1.7e-07 59.7 43 60.5
CiPaw.02G163300 Carya illinoinensis HOM05D000021 ORTHO05D000010 1.7e-07 59.7 67 44.8
ECA247G3864 Erigeron canadensis HOM05D000021 ORTHO05D000010 1.7e-07 59.7 65 47.7
Gohir.A10G000400 Gossypium hirsutum HOM05D000021 ORTHO05D000010 1.7e-07 59.7 74 41.9
Gohir.D10G000500 Gossypium hirsutum HOM05D000021 ORTHO05D000010 1.7e-07 59.7 74 41.9
Actinidia36868 Actinidia chinensis HOM05D000021 ORTHO05D000010 2.2e-07 59.3 69 43.5
Dinv23271 Davidia involucrata HOM05D000021 ORTHO05D000010 2.2e-07 59.3 73 43.8
MD17G1226200 Malus domestica HOM05D000021 ORTHO05D000010 2.2e-07 59.3 64 50.0
QL05p036804 Quercus lobata HOM05D000021 ORTHO05D000010 2.2e-07 59.3 68 41.2
Rhsim12G0185900 Rhododendron simsii HOM05D000021 ORTHO05D000010 2.2e-07 59.3 83 39.8
ClCG10G012860 Citrullus lanatus HOM05D000021 ORTHO05D000010 2.9e-07 58.9 43 60.5
ECA247G0667 Erigeron canadensis HOM05D000021 ORTHO05D000010 2.9e-07 58.9 65 46.2
Gohir.A06G114300 Gossypium hirsutum HOM05D000021 ORTHO05D000010 2.9e-07 58.9 69 42.0
Manes.11G067400 Manihot esculenta HOM05D000021 ORTHO05D000010 2.9e-07 58.9 64 42.2
RcHm_v2.0_Chr2g0132491 Rosa chinensis HOM05D000021 ORTHO05D000010 2.9e-07 58.9 71 42.3
Cpa.g.sc602.1 Carica papaya HOM05D000021 ORTHO05D000010 3.8e-07 58.5 69 39.1
Actinidia08938 Actinidia chinensis HOM05D000021 ORTHO05D000010 4.9e-07 58.2 72 38.9
Gorai.010G136200 Gossypium raimondii HOM05D000021 ORTHO05D000010 4.9e-07 58.2 69 42.0
Gorai.011G000900 Gossypium raimondii HOM05D000021 ORTHO05D000010 4.9e-07 58.2 74 40.5
Potri.001G042500 Populus trichocarpa HOM05D000021 ORTHO05D000010 4.9e-07 58.2 69 42.0
Sed0007486 Sechium edule HOM05D000021 ORTHO05D000010 6.4e-07 57.8 65 46.2
CiPaw.01G256200 Carya illinoinensis HOM05D000021 ORTHO05D000010 8.4e-07 57.4 73 41.1
CsaV3_3G032700 Cucumis sativus L. HOM05D000021 ORTHO05D000010 8.4e-07 57.4 65 46.2
Eucgr.F03981 Eucalyptus grandis HOM05D000021 ORTHO05D000010 8.4e-07 57.4 69 39.1
Potri.003G184100 Populus trichocarpa HOM05D000021 ORTHO05D000010 8.4e-07 57.4 69 40.6
Prupe.3G102400 Prunus persica HOM05D000021 ORTHO05D000010 8.4e-07 57.4 71 43.7
TAR625G0685 Trochodendron aralioides HOM05D000021 ORTHO05D000010 8.4e-07 57.4 70 44.3
HPP92_015871 Vanilla planifolia HOM05D000021 ORTHO05D000010 8.4e-07 57.4 43 58.1
Ciclev10027227m.g Citrus clementina HOM05D000021 ORTHO05D000010 1.1e-06 57.0 68 39.7
Sabra03G0134600 Salix brachista HOM05D000021 ORTHO05D000010 1.1e-06 57.0 68 39.7
SalBow7G3347 Salvia bowleyana HOM05D000021 ORTHO05D000010 1.1e-06 57.0 43 55.8
FvH4_6g28380 Fragaria vesca HOM05D000021 ORTHO05D000010 1.4e-06 56.6 68 38.2
FAN05G5679 Fragaria x ananassa HOM05D000021 ORTHO05D000010 1.4e-06 56.6 68 38.2
FAN09G0830 Fragaria x ananassa HOM05D000021 ORTHO05D000010 1.4e-06 56.6 68 39.7
FAN09G2029 Fragaria x ananassa HOM05D000021 ORTHO05D000010 1.4e-06 56.6 68 39.7
FAN14G2192 Fragaria x ananassa HOM05D000021 ORTHO05D000010 1.4e-06 56.6 68 38.2
Rhsim12G0184900 Rhododendron simsii HOM05D000021 ORTHO05D000010 1.4e-06 56.6 65 44.6
Atru.chr1.2796 Acer truncatum HOM05D000021 ORTHO05D000010 1.9e-06 56.2 80 37.5
Aqoxy7G03351 Aquilegia oxysepala HOM05D000021 ORTHO05D000010 1.9e-06 56.2 60 43.3
Dinv03770 Davidia involucrata HOM05D001469 ORTHO05D001648 1.9e-06 56.2 31 83.9
PSO782G3384 Papaver somniferum HOM05D000021 ORTHO05D000010 1.9e-06 56.2 42 57.1
Rhsim12G0185600 Rhododendron simsii HOM05D000021 ORTHO05D000010 1.9e-06 56.2 68 41.2
DCAR_025549 Daucus carota HOM05D000021 ORTHO05D000010 2.4e-06 55.8 42 57.1
Lsat_1_v5_gn_1_30780 Lactuca sativa HOM05D000021 ORTHO05D000010 2.4e-06 55.8 69 39.1
PGR102G2698 Punica granatum HOM05D000021 ORTHO05D000010 2.4e-06 55.8 68 39.7
Rhsim12G0186100 Rhododendron simsii HOM05D000021 ORTHO05D000010 2.4e-06 55.8 68 42.6
HanXRQChr02g0033651 Helianthus annuus HOM05D000021 ORTHO05D000010 4.2e-06 55.1 65 43.1
TAR531G0002 Trochodendron aralioides HOM05D000021 ORTHO05D000010 4.2e-06 55.1 70 42.9
vmacro16843 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 4.2e-06 55.1 68 41.2
Migut.I00681 Erythranthe guttata HOM05D000021 ORTHO05D000010 7.1e-06 54.3 43 55.8


User provided reference genes

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