Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv30991 Davidia involucrata HOM05D007286 ORTHO05D008955 7.8e-113 410.6 228 100.0
Dinv31112 Davidia involucrata HOM05D007286 ORTHO05D008955 7.8e-113 410.6 228 100.0
Hma1.2p1_0233F.1_g097980 Hydrangea macrophylla HOM05D007286 ORTHO05D008955 1.4e-53 213.8 287 48.4
CSS0007228 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.2e-42 174.9 278 45.7
CSS0046865 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D008955 7.2e-42 174.9 278 45.7
TAR555G0002 Trochodendron aralioides HOM05D007286 ORTHO05D008955 2.7e-36 156.4 307 40.1
vmacro13789 Vaccinium macrocarpon HOM05D007286 ORTHO05D008955 9.5e-34 147.9 248 46.8
vmacro23447 Vaccinium macrocarpon HOM05D007286 ORTHO05D008955 1.6e-33 147.1 248 45.6
Nn7g37274 Nelumbo nucifera HOM05D007286 ORTHO05D008955 2.8e-33 146.4 301 40.2
Nitab4.5_0001611g0060 Nicotiana tabacum HOM05D007286 ORTHO05D008955 1.8e-32 143.7 262 47.3
Nitab4.5_0005056g0090 Nicotiana tabacum HOM05D007286 ORTHO05D008955 2.3e-32 143.3 260 47.7
Rhsim07G0072400 Rhododendron simsii HOM05D007286 ORTHO05D008955 3.0e-32 142.9 272 41.9
GSVIVG01027344001 Vitis vinifera HOM05D007286 ORTHO05D008955 5.7e-31 138.7 284 39.8
Actinidia12136 Actinidia chinensis HOM05D007286 ORTHO05D008955 9.8e-31 137.9 250 43.6
Peaxi162Scf00647g00320 Petunia axillaris HOM05D007286 ORTHO05D008955 1.7e-30 137.1 260 43.8
Dinv20486 Davidia involucrata HOM05D007286 ORTHO05D008955 8.3e-30 134.8 69 95.7
Sopen01g040600 Solanum pennellii HOM05D007286 ORTHO05D008955 8.3e-30 134.8 261 42.9
Solyc01g096890.4 Solanum lycopersicum HOM05D007286 ORTHO05D008955 4.1e-29 132.5 261 42.1
PGSC0003DMG401027501 Solanum tuberosum HOM05D007286 ORTHO05D008955 5.4e-29 132.1 269 42.4
CAN.G134.51 Capsicum annuum HOM05D007286 ORTHO05D008955 9.2e-29 131.3 259 42.1
Ciclev10000662m.g Citrus clementina HOM05D007286 ORTHO05D008955 9.2e-29 131.3 303 38.9
Lsat_1_v5_gn_5_41960 Lactuca sativa HOM05D007286 ORTHO05D008955 1.5e-26 124.0 305 36.1
HanXRQChr07g0192711 Helianthus annuus HOM05D007286 ORTHO05D008955 5.6e-26 122.1 241 41.1
Haze_03401 Corylus avellana HOM05D007286 ORTHO05D008955 9.5e-26 121.3 281 36.7
PGR142G0126 Punica granatum HOM05D007286 ORTHO05D008955 1.6e-25 120.6 288 37.5
Cfa010442 Carpinus fangiana HOM05D007286 ORTHO05D008955 2.1e-25 120.2 264 37.9
Potri.008G012000 Populus trichocarpa HOM05D007286 ORTHO05D008955 8.0e-25 118.2 294 40.1
QL04p050581 Quercus lobata HOM05D007286 ORTHO05D008955 3.1e-24 116.3 283 36.7
Potri.010G247100 Populus trichocarpa HOM05D007286 ORTHO05D008955 6.8e-24 115.2 298 38.9
TWI38G1128 Tripterygium wilfordii HOM05D007286 ORTHO05D008955 6.8e-24 115.2 291 35.7
Cfa000528 Carpinus fangiana HOM05D007286 ORTHO05D008955 1.5e-23 114.0 247 39.3
CiPaw.13G047300 Carya illinoinensis HOM05D007286 ORTHO05D008955 2.0e-23 113.6 277 37.2
Cc07_g21330 Coffea canephora HOM05D007286 ORTHO05D008955 2.0e-23 113.6 284 36.6
Sabra08G0007300 Salix brachista HOM05D007286 ORTHO05D008955 2.0e-23 113.6 300 39.3
Sabra10G0192500 Salix brachista HOM05D007286 ORTHO05D008955 4.4e-23 112.5 298 37.9
PSO339G4644 Papaver somniferum HOM05D007286 ORTHO05D008955 9.8e-23 111.3 268 37.3
Manes.10G063001 Manihot esculenta HOM05D000188 ORTHO05D000362 8.3e-22 108.2 268 36.9
DCAR_025313 Daucus carota HOM05D007286 ORTHO05D008955 1.9e-21 107.1 315 34.6
Prupe.2G060300 Prunus persica HOM05D007286 ORTHO05D008955 1.9e-21 107.1 295 34.2
ECA246G2791 Erigeron canadensis HOM05D000076 ORTHO05D002730 2.4e-21 106.7 259 36.7
MBI19_g06405_MAGBIO Magnolia biondii HOM05D007286 ORTHO05D008955 3.2e-21 106.3 295 35.9
Atru.chr12.1143 Acer truncatum HOM05D007286 ORTHO05D008955 9.2e-21 104.8 230 40.4
AUR62041274 Chenopodium quinoa HOM05D007286 ORTHO05D008955 3.5e-20 102.8 310 32.6
RcHm_v2.0_Chr1g0331161 Rosa chinensis HOM05D007286 ORTHO05D008955 7.8e-20 101.7 301 34.2
FAN06G0358 Fragaria x ananassa HOM05D007286 ORTHO05D008955 3.9e-19 99.4 291 35.7
CANSAT56G4194 Cannabis sativa HOM05D007286 ORTHO05D008955 8.6e-19 98.2 250 37.6
FvH4_7g04960 Fragaria vesca HOM05D007286 ORTHO05D008955 1.9e-18 97.1 291 35.4
Lalb_Chr19g0132561 Lupinus albus HOM05D007286 ORTHO05D008955 5.6e-18 95.5 260 36.5
CANSAT56G1680 Cannabis sativa HOM05D007286 ORTHO05D008955 7.3e-18 95.1 250 36.8
ClCG05G022150 Citrullus lanatus HOM05D007286 ORTHO05D008955 7.3e-18 95.1 305 33.1
Eucgr.G02637 Eucalyptus grandis HOM05D007286 ORTHO05D008955 7.3e-18 95.1 249 36.1
MD02G1265200 Malus domestica HOM05D007286 ORTHO05D008955 7.3e-18 95.1 304 33.2
FAN03G1022 Fragaria x ananassa HOM05D007286 ORTHO05D008955 9.5e-18 94.7 291 34.7
FAN10G3167 Fragaria x ananassa HOM05D007286 ORTHO05D008955 2.8e-17 93.2 291 34.7
AUR62034104 Chenopodium quinoa HOM05D007286 ORTHO05D008955 4.7e-17 92.4 310 31.9
Aqoxy1G00088 Aquilegia oxysepala HOM05D007286 ORTHO05D008955 1.4e-16 90.9 309 31.1
COL.COLO4_28923 Corchorus olitorius HOM05D007286 ORTHO05D008955 1.8e-16 90.5 302 34.1
MELO3C012308.2 Cucumis melo HOM05D007286 ORTHO05D008955 8.9e-16 88.2 310 30.6
VMungo1127G0495 Vigna mungo HOM05D007286 ORTHO05D008955 2.0e-15 87.0 256 34.0
CsaV3_5G034980 Cucumis sativus L. HOM05D007286 ORTHO05D008955 5.8e-15 85.5 305 31.5
FAN10G0279 Fragaria x ananassa HOM05D000139 ORTHO05D008955 1.3e-14 84.3 279 32.3
Sc09g0004920 Simmondsia chinensis HOM05D007286 ORTHO05D008955 2.9e-14 83.2 287 31.4
Sed0010854 Sechium edule HOM05D007286 ORTHO05D008955 6.4e-14 82.0 296 30.1
FAN01G1792 Fragaria x ananassa HOM05D007286 ORTHO05D008955 8.3e-14 81.6 79 58.2
FAN03G2081 Fragaria x ananassa HOM05D007286 ORTHO05D008955 8.3e-14 81.6 79 58.2
ATR0307G001 Amborella trichopoda HOM05D007286 ORTHO05D008955 1.1e-13 81.3 313 31.6
Psat4g141960 Pisum sativum HOM05D007286 ORTHO05D008955 1.1e-13 81.3 275 33.5
Phvul.011G187500 Phaseolus vulgaris HOM05D007286 ORTHO05D008955 4.6e-12 75.9 262 32.4
FvH4_7g05350 Fragaria vesca HOM05D007286 ORTHO05D008955 1.0e-11 74.7 222 33.8
Medtr8g044120 Medicago truncatula HOM05D007286 ORTHO05D008955 3.0e-11 73.2 241 33.2
Glyma.08G227900 Glycine max HOM05D007286 ORTHO05D008955 5.1e-11 72.4 271 32.5
arahy.Tifrunner.gnm1.ann1.VD1ICN Arachis hypogaea HOM05D007286 ORTHO05D008955 6.6e-11 72.0 295 30.5
Thecc.10G130100 Theobroma cacao HOM05D007286 ORTHO05D008955 1.5e-10 70.9 290 35.5
arahy.Tifrunner.gnm1.ann1.5NH7JH Arachis hypogaea HOM05D007286 ORTHO05D008955 1.9e-10 70.5 298 29.9
Lj3g0009162 Lotus japonicus HOM05D007286 ORTHO05D008955 3.3e-10 69.7 231 32.9
EL10Ac4g08793 Beta vulgaris HOM05D007286 ORTHO05D008955 4.3e-10 69.3 294 31.0
Glyma.15G221400 Glycine max HOM05D007286 ORTHO05D008955 5.6e-10 68.9 273 31.5
Hund06829 Selenicereus undatus HOM05D007286 ORTHO05D008955 7.3e-10 68.6 226 32.3
Gohir.A05G285500 Gossypium hirsutum HOM05D007286 ORTHO05D008955 1.8e-08 63.9 307 29.3
SGA_v2.0_scaffold143G35713 Striga asiatica HOM05D007286 ORTHO05D008955 4.0e-08 62.8 94 44.7
Duzib128G1558 Durio zibethinus HOM05D000138 ORTHO05D008955 5.2e-08 62.4 244 32.0
Ah.04g162700 Amaranthus hybridus HOM05D003625 ORTHO05D004382 7.6e-07 58.5 92 46.7
Gorai.009G301600 Gossypium raimondii HOM05D007286 ORTHO05D008955 7.6e-07 58.5 202 30.7
Gohir.D05G286600 Gossypium hirsutum HOM05D007286 ORTHO05D008955 9.9e-07 58.2 202 30.7
MSTRG.20479 Avicennia marina HOM05D007286 ORTHO05D008955 1.3e-06 57.8 286 31.5
PGSC0003DMG400005616 Solanum tuberosum HOM05D009966 ORTHO05D012083 1.3e-06 57.8 38 73.7
SalBow8G2801 Salvia bowleyana HOM05D007286 ORTHO05D008955 2.9e-06 56.6 282 27.7
HPP92_018000 Vanilla planifolia HOM05D007286 ORTHO05D008955 2.9e-06 56.6 287 26.8
Migut.B01162 Erythranthe guttata HOM05D007286 ORTHO05D008955 8.4e-06 55.1 83 44.6


User provided reference genes

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