Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv30948 Davidia involucrata HOM05D006309 ORTHO05D007937 5.4e-46 187.2 88 100.0
CSS0019637 Camellia sinensis var. sinensis HOM05D006309 ORTHO05D007937 2.1e-34 148.7 73 94.5
CSS0033999 Camellia sinensis var. sinensis HOM05D006309 ORTHO05D007937 2.1e-34 148.7 73 94.5
Dinv24513 Davidia involucrata HOM05D006309 ORTHO05D007937 1.1e-33 146.4 73 95.9
Ciclev10013195m.g Citrus clementina HOM05D006309 ORTHO05D007937 1.5e-32 142.5 73 89.0
QL03p010963 Quercus lobata HOM05D006309 ORTHO05D007937 2.0e-32 142.1 70 95.7
MD12G1199900 Malus domestica HOM05D006309 ORTHO05D007937 5.8e-32 140.6 73 91.8
Ah.06g190700 Amaranthus hybridus HOM05D006309 ORTHO05D007937 7.6e-32 140.2 73 89.0
CiPaw.04G111200 Carya illinoinensis HOM05D006309 ORTHO05D007937 9.9e-32 139.8 73 91.8
Solyc03g098120.3 Solanum lycopersicum HOM05D006309 ORTHO05D007937 9.9e-32 139.8 71 91.5
Sopen03g028820 Solanum pennellii HOM05D006309 ORTHO05D007937 9.9e-32 139.8 71 91.5
Duzib205G1677 Durio zibethinus HOM05D006309 ORTHO05D007937 1.3e-31 139.4 73 90.4
Hund05518 Selenicereus undatus HOM05D006309 ORTHO05D007937 1.3e-31 139.4 73 90.4
CAN.G637.25 Capsicum annuum HOM05D006309 ORTHO05D007937 1.7e-31 139.0 71 90.1
AUR62000475 Chenopodium quinoa HOM05D006309 ORTHO05D007937 2.9e-31 138.3 73 84.9
Gohir.A08G153400 Gossypium hirsutum HOM05D006309 ORTHO05D007937 2.9e-31 138.3 72 88.9
Gohir.D08G174300 Gossypium hirsutum HOM05D006309 ORTHO05D007937 2.9e-31 138.3 72 88.9
Gorai.004G182000 Gossypium raimondii HOM05D006309 ORTHO05D007937 2.9e-31 138.3 72 88.9
Oeu061901.1 Olea europaea HOM05D006309 ORTHO05D007937 2.9e-31 138.3 73 89.0
PGSC0003DMG400031051 Solanum tuberosum HOM05D006309 ORTHO05D007937 2.9e-31 138.3 71 90.1
Cc02_g35850 Coffea canephora HOM05D006309 ORTHO05D007937 3.8e-31 137.9 73 84.9
Rhsim11G0105200 Rhododendron simsii HOM05D006309 ORTHO05D007937 3.8e-31 137.9 73 89.0
CDE09G0003 Ceratophyllum demersum HOM05D006309 ORTHO05D007937 4.9e-31 137.5 70 87.1
Haze_03988 Corylus avellana HOM05D006309 ORTHO05D007937 4.9e-31 137.5 73 90.4
Manes.09G181100 Manihot esculenta HOM05D006309 ORTHO05D007937 4.9e-31 137.5 70 90.0
Nitab4.5_0000936g0050 Nicotiana tabacum HOM05D006309 ORTHO05D007937 4.9e-31 137.5 71 87.3
CiPaw.07G036200 Carya illinoinensis HOM05D006309 ORTHO05D007937 6.4e-31 137.1 73 89.0
Cpa.g.sc48.50 Carica papaya HOM05D006309 ORTHO05D007937 8.4e-31 136.7 73 87.7
Ca_10200_v3 Cicer arietinum L. HOM05D006309 ORTHO05D007937 8.4e-31 136.7 73 84.9
Hma1.2p1_0759F.1_g213920 Hydrangea macrophylla HOM05D006309 ORTHO05D007937 8.4e-31 136.7 69 92.8
Psat6g155680 Pisum sativum HOM05D006309 ORTHO05D007937 8.4e-31 136.7 72 86.1
Rhsim11G0104500 Rhododendron simsii HOM05D006309 ORTHO05D007937 8.4e-31 136.7 73 86.3
vmacro16416 Vaccinium macrocarpon HOM05D006309 ORTHO05D007937 8.4e-31 136.7 73 87.7
Migut.H01672 Erythranthe guttata HOM05D006309 ORTHO05D007937 1.1e-30 136.3 73 87.7
Peaxi162Scf00171g00731 Petunia axillaris HOM05D006309 ORTHO05D007937 1.1e-30 136.3 71 85.9
Sc09g0002420 Simmondsia chinensis HOM05D006309 ORTHO05D007937 1.1e-30 136.3 73 83.6
Nitab4.5_0004454g0020 Nicotiana tabacum HOM05D006309 ORTHO05D007937 1.4e-30 136.0 71 85.9
FAN15G2822 Fragaria x ananassa HOM05D006309 ORTHO05D007937 1.9e-30 135.6 73 84.9
GSVIVG01031328001 Vitis vinifera HOM05D006309 ORTHO05D007937 1.9e-30 135.6 73 86.3
Lalb_Chr02g0147551 Lupinus albus HOM05D006309 ORTHO05D007937 2.5e-30 135.2 73 82.2
arahy.Tifrunner.gnm1.ann1.RC3JIS Arachis hypogaea HOM05D006309 ORTHO05D007937 3.2e-30 134.8 73 83.6
Lalb_Chr21g0310061 Lupinus albus HOM05D006309 ORTHO05D007937 3.2e-30 134.8 73 82.2
Medtr1g484930 Medicago truncatula HOM05D006309 ORTHO05D007937 4.2e-30 134.4 73 83.6
Phvul.007G205000 Phaseolus vulgaris HOM05D006309 ORTHO05D007937 4.2e-30 134.4 73 86.3
VMungo0720G0633 Vigna mungo HOM05D006309 ORTHO05D007937 5.5e-30 134.0 72 86.1
arahy.Tifrunner.gnm1.ann1.P9U7KY Arachis hypogaea HOM05D006309 ORTHO05D007937 7.1e-30 133.7 73 82.2
arahy.Tifrunner.gnm1.ann1.VGN228 Arachis hypogaea HOM05D006309 ORTHO05D007937 7.1e-30 133.7 73 82.2
ClCG02G014650 Citrullus lanatus HOM05D006309 ORTHO05D007937 7.1e-30 133.7 72 84.7
Nn7g36656 Nelumbo nucifera HOM05D006309 ORTHO05D007937 7.1e-30 133.7 73 84.9
Prupe.6G304700 Prunus persica HOM05D006309 ORTHO05D007937 7.1e-30 133.7 70 88.6
Atru.chr12.1543 Acer truncatum HOM05D006309 ORTHO05D007937 9.3e-30 133.3 70 87.1
Sed0021183 Sechium edule HOM05D006309 ORTHO05D007937 9.3e-30 133.3 72 84.7
AL1G67090 Arabidopsis lyrata HOM05D006309 ORTHO05D007937 1.2e-29 132.9 72 84.7
Carub.0002s0712 Capsella rubella HOM05D006309 ORTHO05D007937 1.2e-29 132.9 72 84.7
Os01g0250600 Oryza sativa ssp. japonica HOM05D006309 ORTHO05D007937 1.2e-29 132.9 70 84.3
TPR.G2591 Trifolium pratense HOM05D006309 ORTHO05D007937 1.2e-29 132.9 73 82.2
CARHR288700 Cardamine hirsuta HOM05D006309 ORTHO05D007937 1.6e-29 132.5 72 83.3
RcHm_v2.0_Chr3g0458531 Rosa chinensis HOM05D006309 ORTHO05D007937 1.6e-29 132.5 73 84.9
Lj5g0003279 Lotus japonicus HOM05D006309 ORTHO05D007937 2.7e-29 131.7 73 84.9
Thecc.03G310900 Theobroma cacao HOM05D006309 ORTHO05D007937 2.7e-29 131.7 73 84.9
AUR62017099 Chenopodium quinoa HOM05D006309 ORTHO05D007937 3.5e-29 131.3 73 82.2
Lsat_1_v5_gn_1_112940 Lactuca sativa HOM05D006309 ORTHO05D007937 3.5e-29 131.3 72 81.9
TAR636G2194 Trochodendron aralioides HOM05D006309 ORTHO05D007937 3.5e-29 131.3 70 85.7
vmacro01669 Vaccinium macrocarpon HOM05D006309 ORTHO05D007937 3.5e-29 131.3 74 85.1
AT1G57540 Arabidopsis thaliana HOM05D006309 ORTHO05D007937 4.6e-29 131.0 72 81.9
FvH4_2g19190 Fragaria vesca HOM05D006309 ORTHO05D007937 4.6e-29 131.0 73 83.6
FvH4_6g08490 Fragaria vesca HOM05D006309 ORTHO05D007937 4.6e-29 131.0 73 83.6
FAN02G0285 Fragaria x ananassa HOM05D006309 ORTHO05D007937 4.6e-29 131.0 73 83.6
FAN05G1622 Fragaria x ananassa HOM05D006309 ORTHO05D007937 4.6e-29 131.0 73 83.6
FAN09G1610 Fragaria x ananassa HOM05D006309 ORTHO05D007937 4.6e-29 131.0 73 83.6
FAN14G3239 Fragaria x ananassa HOM05D006309 ORTHO05D007937 4.6e-29 131.0 73 83.6
FAN24G3038 Fragaria x ananassa HOM05D006309 ORTHO05D007937 4.6e-29 131.0 73 83.6
Glyma.20G090800 Glycine max HOM05D006309 ORTHO05D007937 4.6e-29 131.0 73 82.2
Glyma.20G092200 Glycine max HOM05D006309 ORTHO05D007937 4.6e-29 131.0 73 82.2
HanXRQChr08g0212181 Helianthus annuus HOM05D006309 ORTHO05D007937 4.6e-29 131.0 73 80.8
Sc16g0009400 Simmondsia chinensis HOM05D006309 ORTHO05D007937 4.6e-29 131.0 73 80.8
Aqoxy2G02488 Aquilegia oxysepala HOM05D006309 ORTHO05D007937 1.0e-28 129.8 72 81.9
Potri.005G002900 Populus trichocarpa HOM05D006309 ORTHO05D007937 1.0e-28 129.8 73 83.6
TWI36G0052 Tripterygium wilfordii HOM05D006309 ORTHO05D007937 1.0e-28 129.8 73 82.2
BcaB07g31141 Brassica carinata HOM05D006309 ORTHO05D007937 1.3e-28 129.4 72 80.6
BcaC04g22081 Brassica carinata HOM05D006309 ORTHO05D007937 1.3e-28 129.4 72 80.6
A09p18900 Brassica napus HOM05D006309 ORTHO05D007937 1.3e-28 129.4 72 80.6
C09p23680 Brassica napus HOM05D006309 ORTHO05D007937 1.3e-28 129.4 72 80.6
BraA09t37510Z Brassica rapa HOM05D006309 ORTHO05D007937 1.3e-28 129.4 72 80.6
PGR083G2709 Punica granatum HOM05D006309 ORTHO05D007937 1.3e-28 129.4 72 81.9
Sp1g28800 Schrenkiella parvula HOM05D006309 ORTHO05D007937 1.3e-28 129.4 72 80.6
Actinidia22855 Actinidia chinensis HOM05D006309 ORTHO05D007937 1.8e-28 129.0 72 83.3
THA.LOC104820476 Tarenaya hassleriana HOM05D006309 ORTHO05D007937 1.8e-28 129.0 69 82.6
EL10Ac4g09558 Beta vulgaris HOM05D006309 ORTHO05D007937 2.3e-28 128.6 71 85.9
Sp2g05970 Schrenkiella parvula HOM05D006309 ORTHO05D007937 2.3e-28 128.6 72 79.2
BolC9t55290H Brassica oleracea HOM05D006309 ORTHO05D007937 3.0e-28 128.3 72 79.2
DCAR_007528 Daucus carota HOM05D006309 ORTHO05D007937 3.9e-28 127.9 88 73.9
Thhalv10010969m.g Eutrema salsugineum HOM05D006309 ORTHO05D007937 3.9e-28 127.9 72 80.6
Aa31LG2G11310 Aethionema arabicum HOM05D006309 ORTHO05D007937 5.1e-28 127.5 72 80.6
ECA233G1704 Erigeron canadensis HOM05D006309 ORTHO05D007937 5.1e-28 127.5 73 79.5
ATR0796G010 Amborella trichopoda HOM05D006309 ORTHO05D007937 2.5e-27 125.2 71 81.7
SalBow5G3054 Salvia bowleyana HOM05D006309 ORTHO05D007937 3.3e-27 124.8 73 79.5
MELO3C004152.2 Cucumis melo HOM05D006309 ORTHO05D007937 4.3e-27 124.4 72 77.8
CsaV3_2G007320 Cucumis sativus L. HOM05D006309 ORTHO05D007937 2.1e-26 122.1 72 77.8
unitig_62.g23615 Utricularia gibba HOM05D006309 ORTHO05D007937 2.8e-26 121.7 73 78.1
CANSAT54G2801 Cannabis sativa HOM05D006309 ORTHO05D007937 3.7e-26 121.3 73 79.5
Prupe.8G045300 Prunus persica HOM05D006309 ORTHO05D007937 3.7e-26 121.3 70 81.4
Lj4g0016187 Lotus japonicus HOM05D006309 ORTHO05D007937 2.4e-25 118.6 73 78.1
arahy.Tifrunner.gnm1.ann1.01IKZ7 Arachis hypogaea HOM05D006309 ORTHO05D007937 4.0e-25 117.9 106 57.5
Sabra13G0001700 Salix brachista HOM05D006309 ORTHO05D007937 4.0e-25 117.9 91 67.0
PSO210G0390 Papaver somniferum HOM05D006309 ORTHO05D007937 1.3e-23 112.8 70 72.9
PSO761G0726 Papaver somniferum HOM05D006309 ORTHO05D007937 1.3e-23 112.8 70 72.9
Cfa012394 Carpinus fangiana HOM05D006309 ORTHO05D007937 6.5e-23 110.5 60 86.7
SalBow4G0401 Salvia bowleyana HOM05D006309 ORTHO05D007937 3.2e-22 108.2 96 59.4
SalBow4G1963 Salvia bowleyana HOM05D006309 ORTHO05D007937 3.2e-22 108.2 96 59.4
SalBow4G2407 Salvia bowleyana HOM05D006309 ORTHO05D007937 3.2e-22 108.2 96 59.4
Sabra05G0000300 Salix brachista HOM05D006309 ORTHO05D007937 5.5e-22 107.5 116 51.7
Sabra05G0014400 Salix brachista HOM05D006309 ORTHO05D007937 5.5e-22 107.5 116 51.7
EL10Ac4g07573 Beta vulgaris HOM05D006309 ORTHO05D007937 2.1e-21 105.5 73 72.6
MBI18_g10373_MAGBIO Magnolia biondii HOM05D006309 ORTHO05D007937 6.3e-18 94.0 73 68.5
COL.COLO4_16932 Corchorus olitorius HOM05D006309 ORTHO05D007937 3.4e-16 88.2 48 89.6
MBI06_g06498_MAGBIO Magnolia biondii HOM05D006309 ORTHO05D007937 4.5e-16 87.8 54 77.8
Mapoly0075s0044 Marchantia polymorpha HOM05D006309 ORTHO05D007937 7.9e-13 77.0 66 50.0
Pp3c8_1240 Physcomitrium patens HOM05D006309 ORTHO05D007937 4.3e-11 71.2 71 45.1
Zm00001eb239560 Zea mays HOM05D006309 ORTHO05D007937 3.2e-06 55.1 26 84.6
DCAR_029292 Daucus carota HOM05D002465 ORTHO05D005308 9.4e-06 53.5 25 88.0


User provided reference genes

Program Settings