Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv30939 Davidia involucrata HOM05D006221 ORTHO05D007759 0.0e+00 1250.7 631 100.0
Actinidia11678 Actinidia chinensis HOM05D006221 ORTHO05D007759 3.8e-274 948.0 630 76.7
Hma1.2p1_0052F.1_g030430 Hydrangea macrophylla HOM05D006221 ORTHO05D007759 3.3e-270 934.9 629 75.8
Lju99A6T47 Lonicera japonica HOM05D006221 ORTHO05D007759 2.3e-263 912.1 622 75.9
vmacro01605 Vaccinium macrocarpon HOM05D006221 ORTHO05D007759 9.0e-252 873.6 676 67.8
GSVIVG01031316001 Vitis vinifera HOM05D006221 ORTHO05D007759 4.5e-251 871.3 621 72.1
Rhsim11G0101500 Rhododendron simsii HOM05D006221 ORTHO05D007759 2.2e-242 842.4 746 60.9
Haze_03998 Corylus avellana HOM05D006221 ORTHO05D007759 1.1e-238 830.1 674 65.3
QL03p010449 Quercus lobata HOM05D006221 ORTHO05D007759 1.5e-238 829.7 621 69.1
Solyc01g101110.3 Solanum lycopersicum HOM05D006221 ORTHO05D007759 2.2e-234 815.8 614 67.4
Sopen01g044560 Solanum pennellii HOM05D006221 ORTHO05D007759 4.2e-233 811.6 615 67.6
Manes.09G180400 Manihot esculenta HOM05D006221 ORTHO05D007759 2.2e-229 799.3 619 66.7
Cc02_g35760 Coffea canephora HOM05D006221 ORTHO05D007759 1.8e-228 796.2 647 65.8
Oeu016545.1 Olea europaea HOM05D006221 ORTHO05D007759 5.9e-227 791.2 614 67.8
Migut.B00875 Erythranthe guttata HOM05D006221 ORTHO05D007759 5.0e-226 788.1 630 67.1
MSTRG.16421 Avicennia marina HOM05D006221 ORTHO05D007759 2.5e-225 785.8 624 67.0
Atru.chr12.1555 Acer truncatum HOM05D006221 ORTHO05D007759 3.6e-224 781.9 631 65.0
CiPaw.07G035200 Carya illinoinensis HOM05D006221 ORTHO05D007759 9.7e-222 773.9 554 70.4
Ciclev10011303m.g Citrus clementina HOM05D006221 ORTHO05D007759 2.4e-220 769.2 623 64.0
PGR083G2161 Punica granatum HOM05D006221 ORTHO05D007759 9.1e-220 767.3 612 63.9
TWI38G0202 Tripterygium wilfordii HOM05D006221 ORTHO05D007759 3.8e-218 761.9 625 64.5
Sabra05G0000700 Salix brachista HOM05D006221 ORTHO05D007759 2.1e-216 756.1 628 63.7
Eucgr.B01816 Eucalyptus grandis HOM05D006221 ORTHO05D007759 6.1e-216 754.6 614 65.0
Sabra05G0014800 Salix brachista HOM05D006221 ORTHO05D007759 6.1e-216 754.6 628 63.5
Potri.005G003400 Populus trichocarpa HOM05D006221 ORTHO05D007759 5.2e-215 751.5 633 64.1
Hma1.2p1_0052F.1_g030440 Hydrangea macrophylla HOM05D006221 ORTHO05D007759 2.2e-213 746.1 559 69.2
Nn3g21902 Nelumbo nucifera HOM05D006221 ORTHO05D007759 2.8e-213 745.7 626 62.8
SGA_v2.0_scaffold671G53422 Striga asiatica HOM05D006221 ORTHO05D007759 1.8e-212 743.0 661 61.0
Lj1g0008157 Lotus japonicus HOM05D006221 ORTHO05D007759 1.0e-210 737.3 621 62.5
SalBow5G5479 Salvia bowleyana HOM05D006221 ORTHO05D007759 3.8e-210 735.3 656 60.8
Duzib177G0418 Durio zibethinus HOM05D006221 ORTHO05D007759 1.0e-207 727.2 611 63.8
DCAR_005251 Daucus carota HOM05D006221 ORTHO05D007759 5.2e-207 724.9 633 62.2
CsaV3_1G038010 Cucumis sativus L. HOM05D006221 ORTHO05D007759 7.5e-206 721.1 623 62.4
Thecc.05G328800 Theobroma cacao HOM05D006221 ORTHO05D007759 4.9e-205 718.4 618 62.9
Sed0012716 Sechium edule HOM05D006221 ORTHO05D007759 1.4e-204 716.8 623 60.0
Nitab4.5_0014566g0010 Nicotiana tabacum HOM05D006221 ORTHO05D007759 3.1e-204 715.7 608 62.0
CANSAT54G2840 Cannabis sativa HOM05D006221 ORTHO05D007759 4.1e-204 715.3 626 61.2
CAN.G1248.26 Capsicum annuum HOM05D006221 ORTHO05D007759 1.2e-203 713.8 649 59.5
Ca_09279_v3 Cicer arietinum L. HOM05D006221 ORTHO05D007759 1.2e-203 713.8 609 61.4
ClCG03G017850 Citrullus lanatus HOM05D006221 ORTHO05D007759 2.0e-203 713.0 624 61.4
Dinv30938 Davidia involucrata HOM05D006221 ORTHO05D007759 2.7e-203 712.6 422 85.3
Sc16g0009350 Simmondsia chinensis HOM05D006221 ORTHO05D007759 1.0e-202 710.7 631 60.5
Lalb_Chr18g0046191 Lupinus albus HOM05D006221 ORTHO05D007759 1.1e-201 707.2 619 60.4
PGSC0003DMG400018290 Solanum tuberosum HOM05D006221 ORTHO05D007759 1.9e-201 706.4 604 61.4
Peaxi162Scf00357g00116 Petunia axillaris HOM05D006221 ORTHO05D007759 5.6e-201 704.9 625 60.0
arahy.Tifrunner.gnm1.ann1.CKL802 Arachis hypogaea HOM05D006221 ORTHO05D007759 2.8e-200 702.6 621 59.7
Glyma.19G226000 Glycine max HOM05D006221 ORTHO05D007759 6.1e-200 701.4 621 60.2
Gohir.A13G113400 Gossypium hirsutum HOM05D006221 ORTHO05D007759 3.1e-199 699.1 623 61.3
Gorai.013G131100 Gossypium raimondii HOM05D006221 ORTHO05D007759 9.8e-198 694.1 632 61.2
Gohir.D13G116600 Gossypium hirsutum HOM05D006221 ORTHO05D007759 1.7e-197 693.3 622 61.6
VMungo1383G1939 Vigna mungo HOM05D006221 ORTHO05D007759 2.2e-197 693.0 618 60.2
TPR.G1625 Trifolium pratense HOM05D006221 ORTHO05D007759 4.1e-196 688.7 608 61.0
Phvul.001G222600 Phaseolus vulgaris HOM05D006221 ORTHO05D007759 4.6e-195 685.3 617 59.6
Aqoxy2G02530 Aquilegia oxysepala HOM05D006221 ORTHO05D007759 6.0e-195 684.9 565 62.5
HanXRQChr14g0449401 Helianthus annuus HOM05D006221 ORTHO05D007759 1.3e-194 683.7 612 60.8
PSO761G0564 Papaver somniferum HOM05D006221 ORTHO05D007759 3.0e-194 682.6 624 58.8
ECA236G2609 Erigeron canadensis HOM05D006221 ORTHO05D007759 6.6e-194 681.4 616 59.3
Prupe.6G305800 Prunus persica HOM05D006221 ORTHO05D007759 8.6e-194 681.0 597 62.5
PSO210G0944 Papaver somniferum HOM05D006221 ORTHO05D007759 3.3e-193 679.1 626 58.3
Psat3g014840 Pisum sativum HOM05D006221 ORTHO05D007759 7.3e-193 677.9 556 62.4
MBI19_g32730_MAGBIO Magnolia biondii HOM05D006221 ORTHO05D007759 1.6e-192 676.8 628 59.1
arahy.Tifrunner.gnm1.ann1.7121P0 Arachis hypogaea HOM05D006221 ORTHO05D007759 8.0e-192 674.5 621 58.5
Nitab4.5_0001931g0080 Nicotiana tabacum HOM05D006221 ORTHO05D007759 8.0e-192 674.5 541 63.2
THA.LOC104816844 Tarenaya hassleriana HOM05D006221 ORTHO05D007759 1.8e-191 673.3 622 60.9
Medtr7g111610 Medicago truncatula HOM05D006221 ORTHO05D007759 6.8e-191 671.4 626 57.3
RcHm_v2.0_Chr3g0458361 Rosa chinensis HOM05D006221 ORTHO05D007759 2.6e-190 669.5 597 62.5
Lsat_1_v5_gn_9_77141 Lactuca sativa HOM05D006221 ORTHO05D007759 4.4e-190 668.7 611 58.8
AUR62006807 Chenopodium quinoa HOM05D006221 ORTHO05D007759 5.4e-188 661.8 623 57.8
FAN05G2605 Fragaria x ananassa HOM05D006221 ORTHO05D007759 1.2e-187 660.6 594 62.3
FvH4_6g08390 Fragaria vesca HOM05D006221 ORTHO05D007759 3.9e-186 655.6 601 61.6
AUR62000466 Chenopodium quinoa HOM05D006221 ORTHO05D007759 2.5e-185 652.9 627 57.6
AT1G09450 Arabidopsis thaliana HOM05D006221 ORTHO05D007759 1.2e-184 650.6 617 58.2
FAN02G1566 Fragaria x ananassa HOM05D006221 ORTHO05D007759 2.1e-184 649.8 579 62.7
CARHR009420 Cardamine hirsuta HOM05D006221 ORTHO05D007759 2.8e-184 649.4 609 57.1
Thhalv10007117m.g Eutrema salsugineum HOM05D006221 ORTHO05D007759 3.6e-184 649.0 619 57.8
Carub.0001s0880 Capsella rubella HOM05D006221 ORTHO05D007759 6.2e-184 648.3 613 57.6
AL1G19970 Arabidopsis lyrata HOM05D006221 ORTHO05D007759 8.1e-184 647.9 608 58.4
Sp1g08060 Schrenkiella parvula HOM05D006221 ORTHO05D007759 8.1e-184 647.9 617 57.2
BraA08t35366Z Brassica rapa HOM05D006221 ORTHO05D007759 1.7e-181 640.2 614 57.7
EL10Ac4g09547 Beta vulgaris HOM05D006221 ORTHO05D007759 4.9e-181 638.6 616 56.8
MD04G1187300 Malus domestica HOM05D006221 ORTHO05D007759 1.9e-180 636.7 602 58.5
Hund07280 Selenicereus undatus HOM05D006221 ORTHO05D007759 1.6e-179 633.6 538 61.3
Hund07275 Selenicereus undatus HOM05D006221 ORTHO05D007759 2.1e-179 633.3 613 56.4
Aa31LG1G5650 Aethionema arabicum HOM05D006221 ORTHO05D007759 3.5e-179 632.5 639 55.7
A08p34550 Brassica napus HOM05D006221 ORTHO05D007759 1.0e-178 630.9 617 57.1
BcaB03g13298 Brassica carinata HOM05D006221 ORTHO05D007759 1.7e-178 630.2 619 55.9
C08p12920 Brassica napus HOM05D006221 ORTHO05D007759 3.3e-177 625.9 617 56.6
BolC8t48922H Brassica oleracea HOM05D006221 ORTHO05D007759 1.5e-174 617.1 629 55.5
BcaC07g38511 Brassica carinata HOM05D006221 ORTHO05D007759 6.4e-173 611.7 604 56.0
PSO017G3773 Papaver somniferum HOM05D006221 ORTHO05D007759 2.1e-155 553.5 504 58.7
unitig_699.g19069 Utricularia gibba HOM05D006221 ORTHO05D007759 1.8e-151 540.4 576 53.8
Potri.013G003600 Populus trichocarpa HOM05D006221 ORTHO05D007759 1.5e-145 520.8 403 66.3
TAR633G1110 Trochodendron aralioides HOM05D003727 ORTHO05D004731 1.5e-145 520.8 462 62.8
HPP92_001185 Vanilla planifolia HOM05D006221 ORTHO05D007759 5.6e-145 518.8 662 48.2
Zm00001eb109970 Zea mays HOM05D006221 ORTHO05D007759 2.4e-143 513.5 624 49.2
SHI18018 Sapria himalayana HOM05D006221 ORTHO05D007759 1.3e-138 497.7 512 53.7
ATR0796G167 Amborella trichopoda HOM05D006221 ORTHO05D007759 2.2e-133 480.3 621 47.2
MELO3C015244.2 Cucumis melo HOM05D006221 ORTHO05D007759 6.7e-122 442.2 369 63.1
Ah.10g026960 Amaranthus hybridus HOM05D006221 ORTHO05D007759 2.0e-118 430.6 437 54.0
SEGI_23402 Sequoiadendron giganteum HOM05D006221 ORTHO05D007759 1.1e-113 414.8 705 39.3
CDE08G0155 Ceratophyllum demersum HOM05D006221 ORTHO05D007759 1.0e-101 375.2 582 41.2
FAN09G0827 Fragaria x ananassa HOM05D006221 ORTHO05D007759 2.7e-99 367.1 496 48.8
AagrBONN_evm.TU.Sc2ySwM_228.2896 Anthoceros agrestis HOM05D006221 ORTHO05D007759 6.1e-99 365.9 364 50.5
Mapoly0101s0065 Marchantia polymorpha HOM05D006221 ORTHO05D007759 4.8e-96 356.3 369 52.0
Pp3c5_21110 Physcomitrium patens HOM05D006221 ORTHO05D007759 8.6e-93 345.5 335 52.8
CBR_g46893 Chara braunii HOM05D006221 ORTHO05D007759 5.4e-87 326.2 356 46.9
COL.COLO4_05510 Corchorus olitorius HOM05D006221 ORTHO05D007759 3.2e-79 300.4 628 36.6
Cpa.g.sc48.218 Carica papaya HOM05D006221 ORTHO05D007759 1.6e-78 298.1 529 38.4
SMO169G0298 Selaginella moellendorffii HOM05D006221 ORTHO05D007759 3.0e-61 240.7 238 51.3
Actinidia16908 Actinidia chinensis HOM05D006221 ORTHO05D007759 6.6e-61 239.6 180 70.0
Glyma.03G228700 Glycine max HOM05D006221 ORTHO05D007759 3.0e-53 214.2 143 73.4
Cre02.g108000 Chlamydomonas reinhardtii HOM05D006221 ORTHO05D007759 3.3e-52 210.7 292 40.8
Lj9A230T20 Lonicera japonica HOM05D006221 ORTHO05D007759 3.5e-46 190.7 300 41.3
MCO05G201 Micromonas commoda HOM05D006221 ORTHO05D007759 1.1e-36 159.1 168 51.2
Nn5g27477 Nelumbo nucifera HOM05D001388 ORTHO05D001234 1.5e-33 148.7 142 55.6
PRCOL_00002024 Prasinoderma coloniale HOM05D006221 ORTHO05D007759 3.0e-29 134.4 191 39.8
Dinv30937 Davidia involucrata HOM05D006221 ORTHO05D007759 7.4e-20 103.2 159 44.0
C09p35620 Brassica napus HOM05D006221 ORTHO05D007759 7.7e-17 93.2 66 63.6
BolC9t56398H Brassica oleracea HOM05D006221 ORTHO05D007759 7.7e-17 93.2 66 63.6
PRCOL_00002025 Prasinoderma coloniale HOM05D006221 ORTHO05D007759 3.6e-14 84.3 166 33.1
FvH4_1g12820 Fragaria vesca HOM05D006221 ORTHO05D007759 2.5e-12 78.2 101 47.5
Actinidia26529 Actinidia chinensis HOM05D006221 ORTHO05D007759 2.4e-10 71.6 39 71.8
Cfa023263 Carpinus fangiana HOM05D006221 ORTHO05D007759 1.0e-08 66.2 316 22.2
Nn1g08840 Nelumbo nucifera HOM05D006221 ORTHO05D007759 7.2e-07 60.1 52 53.8
PSO170G3396 Papaver somniferum HOM05D000502 ORTHO05D000356 6.1e-06 57.0 115 37.4


User provided reference genes

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