Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv30850 Davidia involucrata HOM05D002608 ORTHO05D003838 3.7e-42 175.3 140 100.0
Dinv05264 Davidia involucrata HOM05D002608 ORTHO05D003838 3.0e-39 165.6 140 95.7
CSS0020825 Camellia sinensis var. sinensis HOM05D002608 ORTHO05D003838 3.5e-24 115.5 144 79.2
Thecc.01G130800 Theobroma cacao HOM05D002608 ORTHO05D003838 3.5e-24 115.5 137 67.2
Dinv24411 Davidia involucrata HOM05D002608 ORTHO05D003838 1.5e-22 110.2 94 89.4
COL.COLO4_35714 Corchorus olitorius HOM05D002608 ORTHO05D003838 2.5e-22 109.4 137 63.5
Gohir.D08G224200 Gossypium hirsutum HOM05D002608 ORTHO05D003838 2.8e-21 105.9 136 64.0
Hma1.2p1_0472F.1_g159760 Hydrangea macrophylla HOM05D002608 ORTHO05D003838 4.8e-21 105.1 142 71.1
Thecc.05G318700 Theobroma cacao HOM05D002608 ORTHO05D003838 8.1e-21 104.4 135 66.7
Hma1.2p1_1441F.1_g283600 Hydrangea macrophylla HOM05D002608 ORTHO05D003838 1.4e-20 103.6 142 69.0
Gohir.A11G268500 Gossypium hirsutum HOM05D002608 ORTHO05D003838 1.8e-20 103.2 135 61.5
Gorai.004G238100 Gossypium raimondii HOM05D002608 ORTHO05D003838 4.0e-20 102.1 135 67.4
Haze_20749 Corylus avellana HOM05D002608 ORTHO05D003838 1.2e-19 100.5 139 65.5
Actinidia21508 Actinidia chinensis HOM05D002608 ORTHO05D003838 4.4e-19 98.6 140 67.1
Gorai.007G300600 Gossypium raimondii HOM05D002608 ORTHO05D003838 9.9e-19 97.4 128 62.5
Actinidia19767 Actinidia chinensis HOM05D002608 ORTHO05D003838 1.7e-18 96.7 127 73.2
TAR365G0313 Trochodendron aralioides HOM05D002608 ORTHO05D003838 1.7e-18 96.7 137 60.6
TAR383G0809 Trochodendron aralioides HOM05D002608 ORTHO05D003838 3.8e-18 95.5 137 61.3
Manes.09G174300 Manihot esculenta HOM05D002608 ORTHO05D003838 6.4e-18 94.7 138 68.1
TAR374G0864 Trochodendron aralioides HOM05D002608 ORTHO05D003838 8.4e-18 94.4 137 58.4
Manes.08G114400 Manihot esculenta HOM05D002608 ORTHO05D003838 1.4e-17 93.6 141 64.5
Potri.013G011900 Populus trichocarpa HOM05D002608 ORTHO05D003838 1.4e-17 93.6 136 69.1
Cfa006672 Carpinus fangiana HOM05D002608 ORTHO05D003838 1.2e-16 90.5 154 58.4
Duzib177G0789 Durio zibethinus HOM05D002608 ORTHO05D003838 1.2e-16 90.5 127 60.6
TWI56G0709 Tripterygium wilfordii HOM05D002608 ORTHO05D003838 2.1e-16 89.7 137 65.0
Duzib106G0606 Durio zibethinus HOM05D002608 ORTHO05D003838 2.7e-16 89.4 136 62.5
Gohir.D11G278500 Gossypium hirsutum HOM05D002608 ORTHO05D003838 2.7e-16 89.4 127 65.4
Sabra13G0010400 Salix brachista HOM05D002608 ORTHO05D003838 3.5e-16 89.0 138 65.2
TWI12G0370 Tripterygium wilfordii HOM05D002608 ORTHO05D003838 3.5e-16 89.0 137 63.5
Atru.chr2.118 Acer truncatum HOM05D002608 ORTHO05D003838 4.6e-16 88.6 138 62.3
Cfa017421 Carpinus fangiana HOM05D002608 ORTHO05D003838 4.6e-16 88.6 139 69.1
CANSAT56G4271 Cannabis sativa HOM05D002608 ORTHO05D003838 1.3e-15 87.0 141 64.5
DCAR_022132 Daucus carota HOM05D002608 ORTHO05D003838 1.7e-15 86.7 140 52.9
Gohir.A08G207600 Gossypium hirsutum HOM05D002608 ORTHO05D003838 3.9e-15 85.5 124 54.0
Rhsim05G0135800 Rhododendron simsii HOM05D002608 ORTHO05D003838 3.9e-15 85.5 135 68.1
CsaV3_1G037240 Cucumis sativus L. HOM05D002608 ORTHO05D003838 3.3e-14 82.4 141 59.6
MBI01_g01189_MAGBIO Magnolia biondii HOM05D002608 ORTHO05D003838 4.3e-14 82.0 136 62.5
Sc15g0004560 Simmondsia chinensis HOM05D002608 ORTHO05D003838 7.3e-14 81.3 140 57.9
QL05p010646 Quercus lobata HOM05D002608 ORTHO05D003838 1.3e-13 80.5 138 68.1
QL07p047431 Quercus lobata HOM05D002608 ORTHO05D003838 1.6e-13 80.1 138 68.1
TWI36G0315 Tripterygium wilfordii HOM05D002608 ORTHO05D003838 2.1e-13 79.7 137 57.7
CsaV3_1G037250 Cucumis sativus L. HOM05D002608 ORTHO05D003838 2.8e-13 79.3 140 62.1
CiPaw.09G189400 Carya illinoinensis HOM05D002608 ORTHO05D003838 3.6e-13 79.0 138 61.6
ClCG03G006190 Citrullus lanatus HOM05D002608 ORTHO05D003838 6.2e-13 78.2 137 64.2
CiPaw.07G025500 Carya illinoinensis HOM05D002608 ORTHO05D003838 1.1e-12 77.4 145 53.1
Ciclev10000154m.g Citrus clementina HOM05D002608 ORTHO05D003838 1.8e-12 76.6 152 51.3
Sabra05G0027400 Salix brachista HOM05D002608 ORTHO05D003838 1.8e-12 76.6 141 58.2
Haze_04099 Corylus avellana HOM05D002608 ORTHO05D003838 4.0e-12 75.5 139 54.0
MELO3C002822.2 Cucumis melo HOM05D002608 ORTHO05D003838 9.0e-12 74.3 142 53.5
MELO3C035497.2 Cucumis melo HOM05D002608 ORTHO05D003838 1.5e-11 73.6 136 55.1
MBI17_g38311_MAGBIO Magnolia biondii HOM05D002608 ORTHO05D003838 2.0e-11 73.2 132 53.0
MD04G1196800 Malus domestica HOM05D002608 ORTHO05D003838 3.4e-11 72.4 138 70.3
Potri.005G021400 Populus trichocarpa HOM05D002608 ORTHO05D003838 3.4e-11 72.4 138 54.3
arahy.Tifrunner.gnm1.ann1.PFNK2V Arachis hypogaea HOM05D002608 ORTHO05D003838 5.8e-11 71.6 137 66.4
ClCG03G006160 Citrullus lanatus HOM05D002608 ORTHO05D003838 5.8e-11 71.6 137 59.9
ClCG03G017600 Citrullus lanatus HOM05D002608 ORTHO05D003838 5.8e-11 71.6 135 60.7
CAN.G97.14 Capsicum annuum HOM05D002608 ORTHO05D003838 1.3e-10 70.5 139 55.4
Nitab4.5_0000216g0080 Nicotiana tabacum HOM05D002608 ORTHO05D003838 1.3e-10 70.5 138 50.0
Ah.04g154230 Amaranthus hybridus HOM05D002608 ORTHO05D013420 1.7e-10 70.1 140 61.4
ECA240G3079 Erigeron canadensis HOM05D002608 ORTHO05D003838 2.2e-10 69.7 141 48.2
Sed0023948 Sechium edule HOM05D002608 ORTHO05D003838 2.2e-10 69.7 138 61.6
arahy.Tifrunner.gnm1.ann1.6UH7HR Arachis hypogaea HOM05D002608 ORTHO05D003838 4.9e-10 68.6 137 65.0
Nitab4.5_0000202g0170 Nicotiana tabacum HOM05D002608 ORTHO05D003838 6.4e-10 68.2 138 50.0
Prupe.6G317100 Prunus persica HOM05D002608 ORTHO05D003838 6.4e-10 68.2 129 65.1
Ca_08783_v3 Cicer arietinum L. HOM05D002608 ORTHO05D003838 8.4e-10 67.8 138 49.3
Nitab4.5_0003267g0030 Nicotiana tabacum HOM05D002608 ORTHO05D003838 8.4e-10 67.8 137 53.3
MD12G1209700 Malus domestica HOM05D002608 ORTHO05D003838 1.1e-09 67.4 135 56.3
Cc06_g02900 Coffea canephora HOM05D002608 ORTHO05D003838 1.4e-09 67.0 132 53.0
Oeu049216.1 Olea europaea HOM05D002608 ORTHO05D003838 1.4e-09 67.0 140 53.6
Solyc09g010460.3 Solanum lycopersicum HOM05D002608 ORTHO05D003838 2.4e-09 66.2 138 46.4
Peaxi162Scf00039g01224 Petunia axillaris HOM05D002608 ORTHO05D003838 5.5e-09 65.1 138 50.0
QL03p017837 Quercus lobata HOM05D002608 ORTHO05D003838 5.5e-09 65.1 139 52.5
QL93p2009_0049 Quercus lobata HOM05D002608 ORTHO05D003838 5.5e-09 65.1 139 52.5
Sc02g0009020 Simmondsia chinensis HOM05D002608 ORTHO05D003838 5.5e-09 65.1 140 55.0
Glyma.03G172200 Glycine max HOM05D002608 ORTHO05D003838 7.1e-09 64.7 137 65.0
Sopen09g005200 Solanum pennellii HOM05D002608 ORTHO05D003838 1.6e-08 63.5 138 47.8
Nitab4.5_0002077g0030 Nicotiana tabacum HOM05D002608 ORTHO05D003838 2.1e-08 63.2 137 52.6
Ah.13g074150 Amaranthus hybridus HOM05D002608 ORTHO05D021193 2.7e-08 62.8 140 61.4
MBI17_g38313_MAGBIO Magnolia biondii HOM05D002608 ORTHO05D003838 2.7e-08 62.8 105 51.4
HPP92_005857 Vanilla planifolia HOM05D002608 ORTHO05D003838 2.7e-08 62.8 136 51.5
C03p35460 Brassica napus HOM05D002608 ORTHO05D003838 3.5e-08 62.4 140 60.0
Ca_08785_v3 Cicer arietinum L. HOM05D002608 ORTHO05D003838 3.5e-08 62.4 78 47.4
SalBow2G2051 Salvia bowleyana HOM05D002608 ORTHO05D003838 4.6e-08 62.0 146 50.7
BolC3t15861H Brassica oleracea HOM05D002608 ORTHO05D003838 6.0e-08 61.6 140 59.3
Oeu036170.1 Olea europaea HOM05D002608 ORTHO05D013420 1.3e-07 60.5 101 56.4
BcaC01g04630 Brassica carinata HOM05D002608 ORTHO05D003838 2.3e-07 59.7 141 52.5
Cpa.g.sc48.127 Carica papaya HOM05D002608 ORTHO05D003838 5.1e-07 58.5 140 54.3
CiPaw.10G143500 Carya illinoinensis HOM05D002608 ORTHO05D003838 5.1e-07 58.5 138 62.3
Psat3g048960 Pisum sativum HOM05D002608 ORTHO05D003838 5.1e-07 58.5 144 45.1
Aa31LG9G10810 Aethionema arabicum HOM05D002608 ORTHO05D003838 1.1e-06 57.4 138 58.7
EL10Ac4g09869 Beta vulgaris HOM05D002608 ORTHO05D003838 1.5e-06 57.0 144 54.9
THA.LOC104814584 Tarenaya hassleriana HOM05D002608 ORTHO05D003838 2.5e-06 56.2 146 60.3
Glyma.19G173100 Glycine max HOM05D002608 ORTHO05D003838 3.3e-06 55.8 137 60.6
Hund12489 Selenicereus undatus HOM05D002608 ORTHO05D003838 4.3e-06 55.5 142 64.1
AUR62000719 Chenopodium quinoa HOM05D002608 ORTHO05D003838 5.6e-06 55.1 87 66.7
AUR62005245 Chenopodium quinoa HOM05D002608 ORTHO05D003838 5.6e-06 55.1 87 65.5


User provided reference genes

Program Settings